RNA–Protein interactions for RNA: ENST00000437840.6

RGL2-238, Transcript of ral guanine nucleotide dissociation stimulator like 2, human

TSL 1 (best)

Gene RGL2, Length 2,687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RGL2-238	ENST00000437840	PANK1	Q8TE04	598 aa		19.07	■□□□□ 0.64
RGL2-238	ENST00000437840	NOS1	P29475	1434 aa		19.06	■□□□□ 0.64
RGL2-238	ENST00000437840	COG6	Q9Y2V7	657 aa		19.06	■□□□□ 0.64
RGL2-238	ENST00000437840	MAPK8IP3	Q9UPT6	1336 aa		19.06	■□□□□ 0.64
RGL2-238	ENST00000437840	RARS	P54136	660 aa	Known RBP	19.05	■□□□□ 0.64
RGL2-238	ENST00000437840	RUNDC1	Q96C34	613 aa		19.05	■□□□□ 0.64
RGL2-238	ENST00000437840	MORC1	Q86VD1	984 aa		19.04	■□□□□ 0.64
RGL2-238	ENST00000437840	FRAT1	Q92837	279 aa	Predicted RBP	19.04	■□□□□ 0.64
RGL2-238	ENST00000437840	ZC3H13	Q5T200	1668 aa	Known RBP	19.04	■□□□□ 0.64
RGL2-238	ENST00000437840	ADGRB1	O14514	1584 aa		19.03	■□□□□ 0.64
RGL2-238	ENST00000437840	KIDINS220	Q9ULH0	1771 aa		19.03	■□□□□ 0.64
RGL2-238	ENST00000437840	SLC12A5	Q9H2X9	1139 aa		19.03	■□□□□ 0.64
RGL2-238	ENST00000437840	FRAT2	O75474	233 aa	Predicted RBP	19.02	■□□□□ 0.64
RGL2-238	ENST00000437840	AAMP	Q13685	434 aa		19.02	■□□□□ 0.64
RGL2-238	ENST00000437840	TCP11L2	Q8N4U5	519 aa		19.02	■□□□□ 0.64
RGL2-238	ENST00000437840	C14orf93	Q9H972	538 aa	Known RBP	19.02	■□□□□ 0.64
RGL2-238	ENST00000437840	NLRP1	Q9C000	1473 aa		19.02	■□□□□ 0.64
RGL2-238	ENST00000437840	USP32	Q8NFA0	1604 aa		19.02	■□□□□ 0.64
RGL2-238	ENST00000437840	SEC24B	O95487	1268 aa		19.02	■□□□□ 0.63
RGL2-238	ENST00000437840	WDR63	Q8IWG1	891 aa		19.02	■□□□□ 0.63
RGL2-238	ENST00000437840	CANX	P27824	592 aa	Known RBP	19.01	■□□□□ 0.63
RGL2-238	ENST00000437840	ZNF518A	Q6AHZ1	1483 aa		19.01	■□□□□ 0.63
RGL2-238	ENST00000437840	CCDC27	Q2M243	656 aa		19	■□□□□ 0.63
RGL2-238	ENST00000437840	TRAK1	Q9UPV9	953 aa		19	■□□□□ 0.63
RGL2-238	ENST00000437840	RRP7A	Q9Y3A4	280 aa	Known RBP	19	■□□□□ 0.63
RGL2-238	ENST00000437840	QRICH2	Q9H0J4	1663 aa		19	■□□□□ 0.63
RGL2-238	ENST00000437840	ZMYM3	Q14202	1370 aa		19	■□□□□ 0.63
RGL2-238	ENST00000437840	RLBP1	P12271	317 aa		18.99	■□□□□ 0.63
RGL2-238	ENST00000437840	PPL	O60437	1756 aa		18.98	■□□□□ 0.63
RGL2-238	ENST00000437840	NEUROD2	Q15784	382 aa		18.98	■□□□□ 0.63
RGL2-238	ENST00000437840	NCBP3	Q53F19	620 aa	Known RBP	18.98	■□□□□ 0.63
RGL2-238	ENST00000437840	PCDHB15	Q9Y5E8	787 aa		18.98	■□□□□ 0.63
RGL2-238	ENST00000437840	TNNT2	P45379	298 aa	Predicted RBP	18.98	■□□□□ 0.63
RGL2-238	ENST00000437840	PMFBP1	Q8TBY8	1022 aa		18.98	■□□□□ 0.63
RGL2-238	ENST00000437840	BRPF3	Q9ULD4	1205 aa		18.98	■□□□□ 0.63
RGL2-238	ENST00000437840	NPAT	Q14207	1427 aa		18.98	■□□□□ 0.63
RGL2-238	ENST00000437840	MTHFS	P49914	203 aa		18.97	■□□□□ 0.63
RGL2-238	ENST00000437840	TNN	Q9UQP3	1299 aa		18.97	■□□□□ 0.63
RGL2-238	ENST00000437840	PUS7	Q96PZ0	661 aa	Known RBP	18.95	■□□□□ 0.62
RGL2-238	ENST00000437840	ASXL2	Q76L83	1435 aa		18.94	■□□□□ 0.62
RGL2-238	ENST00000437840	CHGA	P10645	457 aa	Known RBP	18.94	■□□□□ 0.62
RGL2-238	ENST00000437840	TMEM132E	Q6IEE7	984 aa		18.94	■□□□□ 0.62
RGL2-238	ENST00000437840	RPGRIP1L	Q68CZ1	1315 aa		18.93	■□□□□ 0.62
RGL2-238	ENST00000437840	FRMPD1	Q5SYB0	1578 aa		18.92	■□□□□ 0.62
RGL2-238	ENST00000437840	CFAP53	Q96M91	514 aa		18.92	■□□□□ 0.62
RGL2-238	ENST00000437840	NSD2	O96028	1365 aa		18.92	■□□□□ 0.62
RGL2-238	ENST00000437840	ADGRB2	O60241	1585 aa		18.91	■□□□□ 0.62
RGL2-238	ENST00000437840	BCL2L13	Q9BXK5	485 aa		18.91	■□□□□ 0.62
RGL2-238	ENST00000437840	PDZRN3	Q9UPQ7	1066 aa		18.91	■□□□□ 0.62
RGL2-238	ENST00000437840	ANKRD36B	Q8N2N9	1353 aa		18.91	■□□□□ 0.62
RGL2-238	ENST00000437840	BECN1	Q14457	450 aa		18.91	■□□□□ 0.62
RGL2-238	ENST00000437840	TULP4	Q9NRJ4	1543 aa		18.9	■□□□□ 0.62
RGL2-238	ENST00000437840	TBC1D32	Q96NH3	1257 aa		18.9	■□□□□ 0.62
RGL2-238	ENST00000437840	MYH16	Q9H6N6	1097 aa		18.9	■□□□□ 0.62
RGL2-238	ENST00000437840	ANTXR1	Q9H6X2	564 aa		18.89	■□□□□ 0.61
RGL2-238	ENST00000437840	GLI2	P10070	1586 aa		18.89	■□□□□ 0.61
RGL2-238	ENST00000437840	RWDD1	Q9H446	243 aa	Predicted RBP	18.88	■□□□□ 0.61
RGL2-238	ENST00000437840	HECW2	Q9P2P5	1572 aa		18.88	■□□□□ 0.61
RGL2-238	ENST00000437840	MVP	Q14764	893 aa	Known RBP	18.87	■□□□□ 0.61
RGL2-238	ENST00000437840	MLH3	Q9UHC1	1453 aa		18.87	■□□□□ 0.61
RGL2-238	ENST00000437840	EVC2	Q86UK5	1308 aa		18.87	■□□□□ 0.61
RGL2-238	ENST00000437840	EIF5B	O60841	1220 aa	Known RBP	18.87	■□□□□ 0.61
RGL2-238	ENST00000437840	POGZ	Q7Z3K3	1410 aa		18.86	■□□□□ 0.61
RGL2-238	ENST00000437840	ARHGEF28	Q8N1W1	1705 aa	Known RBP	18.86	■□□□□ 0.61
RGL2-238	ENST00000437840	ABCC3	O15438	1527 aa		18.86	■□□□□ 0.61
RGL2-238	ENST00000437840	CT47B1	P0C2W7	299 aa	Predicted RBP	18.86	■□□□□ 0.61
RGL2-238	ENST00000437840	U2AF1L5	P0DN76	240 aa	Predicted RBP	18.86	■□□□□ 0.61
RGL2-238	ENST00000437840	U2AF1	Q01081	240 aa	Known RBP eCLIP	18.86	■□□□□ 0.61	1e-11	■■■■■ 39.2
RGL2-238	ENST00000437840	CFAP65	Q6ZU64	1925 aa	Known RBP	18.84	■□□□□ 0.61
RGL2-238	ENST00000437840	ZKSCAN2	Q63HK3	967 aa		18.84	■□□□□ 0.61
RGL2-238	ENST00000437840	GGT6	Q6P531	493 aa		18.84	■□□□□ 0.61
RGL2-238	ENST00000437840	UPF2	Q9HAU5	1272 aa	Known RBP	18.84	■□□□□ 0.61
RGL2-238	ENST00000437840	NEXMIF	Q5QGS0	1516 aa		18.83	■□□□□ 0.6
RGL2-238	ENST00000437840	CD109	Q6YHK3	1445 aa		18.83	■□□□□ 0.6
RGL2-238	ENST00000437840	DZIP1L	Q8IYY4	767 aa	Known RBP	18.83	■□□□□ 0.6
RGL2-238	ENST00000437840	PLEKHF1	Q96S99	279 aa		18.83	■□□□□ 0.6
RGL2-238	ENST00000437840	TBC1D2	Q9BYX2	928 aa		18.83	■□□□□ 0.6
RGL2-238	ENST00000437840	SLK	Q9H2G2	1235 aa	Predicted RBP	18.83	■□□□□ 0.6
RGL2-238	ENST00000437840	PIK3C2B	O00750	1634 aa		18.83	■□□□□ 0.6
RGL2-238	ENST00000437840	ABCC11	Q96J66	1382 aa		18.82	■□□□□ 0.6
RGL2-238	ENST00000437840	POGK	Q9P215	609 aa		18.82	■□□□□ 0.6
RGL2-238	ENST00000437840	CAMSAP1	Q5T5Y3	1602 aa		18.81	■□□□□ 0.6
RGL2-238	ENST00000437840	SIGLEC1	Q9BZZ2	1709 aa		18.81	■□□□□ 0.6
RGL2-238	ENST00000437840	COL3A1	P02461	1466 aa	Predicted RBP	18.81	■□□□□ 0.6
RGL2-238	ENST00000437840	VGF	O15240	615 aa	Predicted RBP	18.8	■□□□□ 0.6
RGL2-238	ENST00000437840	TSR2	Q969E8	191 aa	Known RBP	18.8	■□□□□ 0.6
RGL2-238	ENST00000437840	CABP2	Q9NPB3	220 aa		18.8	■□□□□ 0.6
RGL2-238	ENST00000437840		A0A1W2PP64	1363 aa		18.8	■□□□□ 0.6
RGL2-238	ENST00000437840	TRIM35	Q9UPQ4	493 aa		18.79	■□□□□ 0.6
RGL2-238	ENST00000437840	HDAC1	Q13547	482 aa	Predicted RBP	18.79	■□□□□ 0.6
RGL2-238	ENST00000437840	FTSJ3	Q8IY81	847 aa	Known RBP	18.79	■□□□□ 0.6
RGL2-238	ENST00000437840	TRIM27	P14373	513 aa		18.78	■□□□□ 0.6
RGL2-238	ENST00000437840	TMPO	P42166	694 aa	Known RBP	18.78	■□□□□ 0.6
RGL2-238	ENST00000437840	EXOSC9	Q06265	439 aa	Known RBP	18.78	■□□□□ 0.6
RGL2-238	ENST00000437840	CFAP74	Q9C0B2	1584 aa		18.78	■□□□□ 0.6
RGL2-238	ENST00000437840	NUTM2D	Q5VT03	806 aa	Predicted RBP	18.77	■□□□□ 0.6
RGL2-238	ENST00000437840	SSH1	Q8WYL5	1049 aa		18.77	■□□□□ 0.6
RGL2-238	ENST00000437840	SMC4	Q9NTJ3	1288 aa		18.77	■□□□□ 0.6
RGL2-238	ENST00000437840	IL16	Q14005	1332 aa		18.76	■□□□□ 0.59
RGL2-238	ENST00000437840	ZFYVE9	O95405	1425 aa		18.76	■□□□□ 0.59

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