RNA–Protein interactions for RNA: ENST00000435142.1

USP9YP28-201, Transcript of USP9Y pseudogene 28, humanhuman

BASIC

Gene USP9YP28, Length 589 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9YP28-201ENST00000435142 PHOX2BQ99453 314 aa12.16□□□□□ -0.46
USP9YP28-201ENST00000435142 GRIPAP1Q4V328 841 aa12.15□□□□□ -0.46
USP9YP28-201ENST00000435142 RNF19BQ6ZMZ0 732 aa12.15□□□□□ -0.46
USP9YP28-201ENST00000435142 WNT7AO00755 349 aa12.12□□□□□ -0.47
USP9YP28-201ENST00000435142 SNIP1Q8TAD8 396 aaKnown RBP12.12□□□□□ -0.47
USP9YP28-201ENST00000435142 SMPD1P17405 629 aa12.1□□□□□ -0.47
USP9YP28-201ENST00000435142 NFX1Q12986 1120 aaKnown RBP12.09□□□□□ -0.47
USP9YP28-201ENST00000435142 TRIM32Q13049 653 aa12.09□□□□□ -0.47
USP9YP28-201ENST00000435142 Q3C1V9 767 aa12.09□□□□□ -0.47
USP9YP28-201ENST00000435142 MMP16P51512 607 aa12.08□□□□□ -0.48
USP9YP28-201ENST00000435142 MRGPRX2Q96LB1 330 aa12.07□□□□□ -0.48
USP9YP28-201ENST00000435142 ATP13A2Q9NQ11 1180 aa12.07□□□□□ -0.48
USP9YP28-201ENST00000435142 J3QL48 77 aa12.05□□□□□ -0.48
USP9YP28-201ENST00000435142 WIPF1O43516 503 aa12.04□□□□□ -0.48
USP9YP28-201ENST00000435142 SNRPBP14678 240 aaKnown RBP12.03□□□□□ -0.48
USP9YP28-201ENST00000435142 GPIHBP1Q8IV16 184 aa12.03□□□□□ -0.48
USP9YP28-201ENST00000435142 USB1Q9BQ65 265 aaKnown RBP12.03□□□□□ -0.48
USP9YP28-201ENST00000435142 STK17AQ9UEE5 414 aa12.03□□□□□ -0.48
USP9YP28-201ENST00000435142 CD46P15529 392 aa12.02□□□□□ -0.49
USP9YP28-201ENST00000435142 INSM1Q01101 510 aaPredicted RBP12.02□□□□□ -0.49
USP9YP28-201ENST00000435142 REPIN1Q9BWE0 567 aaKnown RBP12.02□□□□□ -0.49
USP9YP28-201ENST00000435142 SENP2Q9HC62 589 aa12.02□□□□□ -0.49
USP9YP28-201ENST00000435142 KDM4AO75164 1064 aa12□□□□□ -0.49
USP9YP28-201ENST00000435142 DXOO77932 396 aaKnown RBP12□□□□□ -0.49
USP9YP28-201ENST00000435142 HPS1Q92902 700 aa12□□□□□ -0.49
USP9YP28-201ENST00000435142 TRIM47Q96LD4 638 aa12□□□□□ -0.49
USP9YP28-201ENST00000435142 TERTO14746 1132 aaKnown RBP11.99□□□□□ -0.49
USP9YP28-201ENST00000435142 CCDC24Q8N4L8 307 aa11.99□□□□□ -0.49
USP9YP28-201ENST00000435142 RC3H1Q5TC82 1133 aaKnown RBP11.97□□□□□ -0.49
USP9YP28-201ENST00000435142 SKOR1P84550 965 aa11.95□□□□□ -0.5
USP9YP28-201ENST00000435142 KIFC2Q96AC6 838 aa11.95□□□□□ -0.5
USP9YP28-201ENST00000435142 WNT7BP56706 349 aa11.94□□□□□ -0.5
USP9YP28-201ENST00000435142 USP46P62068 366 aa11.94□□□□□ -0.5
USP9YP28-201ENST00000435142 LCE2CQ5TA81 110 aa11.94□□□□□ -0.5
USP9YP28-201ENST00000435142 HLA-CQ95604 372 aa11.94□□□□□ -0.5
USP9YP28-201ENST00000435142 MAP2K5Q13163 448 aa11.92□□□□□ -0.5
USP9YP28-201ENST00000435142 MDM2Q00987 491 aaPredicted RBP11.9□□□□□ -0.5
USP9YP28-201ENST00000435142 IRF6O14896 467 aa11.89□□□□□ -0.51
USP9YP28-201ENST00000435142 HOXA2O43364 376 aa11.89□□□□□ -0.51
USP9YP28-201ENST00000435142 ALDH1A1P00352 501 aa11.89□□□□□ -0.51
USP9YP28-201ENST00000435142 JUNDP17535 347 aa11.87□□□□□ -0.51
USP9YP28-201ENST00000435142 PLCB2Q00722 1185 aa11.87□□□□□ -0.51
USP9YP28-201ENST00000435142 GUCA2AQ02747 115 aa11.86□□□□□ -0.51
USP9YP28-201ENST00000435142 SLC16A10Q8TF71 515 aa11.86□□□□□ -0.51
USP9YP28-201ENST00000435142 SYMPKQ92797 1274 aaKnown RBP11.86□□□□□ -0.51
USP9YP28-201ENST00000435142 SIAH2O43255 324 aa11.84□□□□□ -0.51
USP9YP28-201ENST00000435142 MINK1Q8N4C8 1332 aaPredicted RBP11.84□□□□□ -0.51
USP9YP28-201ENST00000435142 PTCRAQ6ISU1 281 aaPredicted RBP11.83□□□□□ -0.52
USP9YP28-201ENST00000435142 EHBP1Q8NDI1 1231 aa11.83□□□□□ -0.52
USP9YP28-201ENST00000435142 NUDT12Q9BQG2 462 aa11.82□□□□□ -0.52
USP9YP28-201ENST00000435142 NXF1Q9UBU9 619 aaKnown RBP11.82□□□□□ -0.52
USP9YP28-201ENST00000435142 RETREG3Q86VR2 466 aa11.81□□□□□ -0.52
USP9YP28-201ENST00000435142 NUTM1Q86Y26 1132 aa11.8□□□□□ -0.52
USP9YP28-201ENST00000435142 WASF2Q9Y6W5 498 aa11.8□□□□□ -0.52
USP9YP28-201ENST00000435142 CAPN5O15484 640 aaPredicted RBP11.79□□□□□ -0.52
USP9YP28-201ENST00000435142 GPCPD1Q9NPB8 672 aa11.79□□□□□ -0.52
USP9YP28-201ENST00000435142 BMP1P13497 986 aa11.78□□□□□ -0.52
USP9YP28-201ENST00000435142 TRIM46Q7Z4K8 759 aa11.78□□□□□ -0.52
USP9YP28-201ENST00000435142 FAM217BQ9NTX9 383 aaPredicted RBP11.78□□□□□ -0.52
USP9YP28-201ENST00000435142 FAM181BA6NEQ2 426 aa11.77□□□□□ -0.53
USP9YP28-201ENST00000435142 CLCN1P35523 988 aa11.77□□□□□ -0.53
USP9YP28-201ENST00000435142 TULP1O00294 542 aaPredicted RBP11.76□□□□□ -0.53
USP9YP28-201ENST00000435142 GMPRP36959 345 aa11.76□□□□□ -0.53
USP9YP28-201ENST00000435142 SH3BP2P78314 561 aa11.76□□□□□ -0.53
USP9YP28-201ENST00000435142 NPAS3Q8IXF0 933 aa11.76□□□□□ -0.53
USP9YP28-201ENST00000435142 CCDC102AQ96A19 550 aa11.76□□□□□ -0.53
USP9YP28-201ENST00000435142 FDX1P10109 184 aa11.74□□□□□ -0.53
USP9YP28-201ENST00000435142 IRF7Q92985 503 aa11.74□□□□□ -0.53
USP9YP28-201ENST00000435142 C6orf229H3BNL8 230 aa11.73□□□□□ -0.53
USP9YP28-201ENST00000435142 CCNYL3P0C7X3 344 aa11.73□□□□□ -0.53
USP9YP28-201ENST00000435142 MS4A1P11836 297 aa11.73□□□□□ -0.53
USP9YP28-201ENST00000435142 KRI1Q8N9T8 703 aaKnown RBP11.73□□□□□ -0.53
USP9YP28-201ENST00000435142 PCDHGC3Q9UN70 934 aa11.73□□□□□ -0.53
USP9YP28-201ENST00000435142 VEGFBP49765 207 aa11.72□□□□□ -0.53
USP9YP28-201ENST00000435142 ZSCAN1Q8NBB4 408 aa11.71□□□□□ -0.53
USP9YP28-201ENST00000435142 EVA1BQ9NVM1 165 aa11.7□□□□□ -0.54
USP9YP28-201ENST00000435142 KDM2AQ9Y2K7 1162 aa11.7□□□□□ -0.54
USP9YP28-201ENST00000435142 LORP23490 312 aaPredicted RBP11.69□□□□□ -0.54
USP9YP28-201ENST00000435142 HAP1P54257 671 aaPredicted RBP11.69□□□□□ -0.54
USP9YP28-201ENST00000435142 ZFP42Q96MM3 310 aa11.69□□□□□ -0.54
USP9YP28-201ENST00000435142 UNC93B1Q9H1C4 597 aa11.69□□□□□ -0.54
USP9YP28-201ENST00000435142 H3BM21 787 aa11.68□□□□□ -0.54
USP9YP28-201ENST00000435142 PTPRNQ16849 979 aa11.68□□□□□ -0.54
USP9YP28-201ENST00000435142 BAP1Q92560 729 aa11.68□□□□□ -0.54
USP9YP28-201ENST00000435142 LINC01559Q495D7 138 aa11.67□□□□□ -0.54
USP9YP28-201ENST00000435142 PLEKHG3A1L390 1219 aa11.66□□□□□ -0.54
USP9YP28-201ENST00000435142 TLL2Q9Y6L7 1015 aa11.66□□□□□ -0.54
USP9YP28-201ENST00000435142 ERBB4Q15303 1308 aa11.65□□□□□ -0.54
USP9YP28-201ENST00000435142 SSTR3P32745 418 aaPredicted RBP11.65□□□□□ -0.54
USP9YP28-201ENST00000435142 KCNH2Q12809 1159 aa11.65□□□□□ -0.54
USP9YP28-201ENST00000435142 SPIRE2Q8WWL2 714 aa11.65□□□□□ -0.54
USP9YP28-201ENST00000435142 VARSP26640 1264 aaKnown RBP11.64□□□□□ -0.55
USP9YP28-201ENST00000435142 NDUFV2P19404 249 aa11.63□□□□□ -0.55
USP9YP28-201ENST00000435142 NNTQ13423 1086 aa11.63□□□□□ -0.55
USP9YP28-201ENST00000435142 MPNDQ8N594 471 aa11.63□□□□□ -0.55
USP9YP28-201ENST00000435142 ZNF511Q8NB15 262 aa11.63□□□□□ -0.55
USP9YP28-201ENST00000435142 PRR7Q8TB68 274 aa11.62□□□□□ -0.55
USP9YP28-201ENST00000435142 MOXD2PA6NHM9 499 aa11.61□□□□□ -0.55
USP9YP28-201ENST00000435142 SCARF1Q14162 830 aa11.61□□□□□ -0.55
USP9YP28-201ENST00000435142 MRPL14Q6P1L8 145 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms