RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 POTEAQ6S8J7 498 aa25.39■■□□□ 1.66
HMGN1-206ENST00000431390 ADAMTS13Q76LX8 1427 aa25.39■■□□□ 1.65
HMGN1-206ENST00000431390 SLC24A1O60721 1099 aa25.39■■□□□ 1.65
HMGN1-206ENST00000431390 DIP2AQ14689 1571 aa25.38■■□□□ 1.65
HMGN1-206ENST00000431390 MSH6P52701 1360 aa25.38■■□□□ 1.65
HMGN1-206ENST00000431390 SBNO2Q9Y2G9 1366 aa25.38■■□□□ 1.65
HMGN1-206ENST00000431390 TRAK1Q9UPV9 953 aa25.38■■□□□ 1.65
HMGN1-206ENST00000431390 DDX10Q13206 875 aaKnown RBP25.37■■□□□ 1.65
HMGN1-206ENST00000431390 QRICH2Q9H0J4 1663 aa25.36■■□□□ 1.65
HMGN1-206ENST00000431390 CENPJQ9HC77 1338 aaPredicted RBP25.36■■□□□ 1.65
HMGN1-206ENST00000431390 TMF1P82094 1093 aa25.35■■□□□ 1.65
HMGN1-206ENST00000431390 DLC1Q96QB1 1528 aa25.35■■□□□ 1.65
HMGN1-206ENST00000431390 LRPPRCP42704 1394 aaKnown RBP25.35■■□□□ 1.65
HMGN1-206ENST00000431390 KNDC1Q76NI1 1749 aa25.35■■□□□ 1.65
HMGN1-206ENST00000431390 METP08581 1390 aa25.32■■□□□ 1.64
HMGN1-206ENST00000431390 ABCC11Q96J66 1382 aa25.31■■□□□ 1.64
HMGN1-206ENST00000431390 SLAIN2Q9P270 581 aa25.31■■□□□ 1.64
HMGN1-206ENST00000431390 COL16A1Q07092 1604 aaPredicted RBP25.3■■□□□ 1.64
HMGN1-206ENST00000431390 TBX22Q9Y458 520 aa25.3■■□□□ 1.64
HMGN1-206ENST00000431390 TECPR2O15040 1411 aa25.29■■□□□ 1.64
HMGN1-206ENST00000431390 STK26Q9P289 416 aa25.29■■□□□ 1.64
HMGN1-206ENST00000431390 CDCA8Q53HL2 280 aa25.28■■□□□ 1.64
HMGN1-206ENST00000431390 JCADQ9P266 1359 aa25.27■■□□□ 1.64
HMGN1-206ENST00000431390 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.25■■□□□ 1.63
HMGN1-206ENST00000431390 SIRT1Q96EB6 747 aa25.25■■□□□ 1.63
HMGN1-206ENST00000431390 PIK3R4Q99570 1358 aa25.24■■□□□ 1.63
HMGN1-206ENST00000431390 POLR3GLQ9BT43 218 aa25.23■■□□□ 1.63
HMGN1-206ENST00000431390 PRAM1Q96QH2 718 aa25.22■■□□□ 1.63
HMGN1-206ENST00000431390 POGKQ9P215 609 aa25.21■■□□□ 1.63
HMGN1-206ENST00000431390 NCOA3Q9Y6Q9 1424 aa25.21■■□□□ 1.63
HMGN1-206ENST00000431390 LRP6O75581 1613 aa25.2■■□□□ 1.63
HMGN1-206ENST00000431390 C14orf37Q86TY3 774 aa25.2■■□□□ 1.62
HMGN1-206ENST00000431390 PTPRUQ92729 1446 aa25.19■■□□□ 1.62
HMGN1-206ENST00000431390 XRN1Q8IZH2 1706 aaKnown RBP25.18■■□□□ 1.62
HMGN1-206ENST00000431390 SHPRHQ149N8 1683 aa25.18■■□□□ 1.62
HMGN1-206ENST00000431390 AHDC1Q5TGY3 1603 aaPredicted RBP25.18■■□□□ 1.62
HMGN1-206ENST00000431390 TULP4Q9NRJ4 1543 aa25.18■■□□□ 1.62
HMGN1-206ENST00000431390 PUS7Q96PZ0 661 aaKnown RBP25.17■■□□□ 1.62
HMGN1-206ENST00000431390 EVC2Q86UK5 1308 aa25.16■■□□□ 1.62
HMGN1-206ENST00000431390 MYOM1P52179 1685 aa25.16■■□□□ 1.62
HMGN1-206ENST00000431390 PTCH1Q13635 1447 aa25.16■■□□□ 1.62
HMGN1-206ENST00000431390 SAFB2Q14151 953 aaKnown RBP eCLIP25.14■■□□□ 1.61
HMGN1-206ENST00000431390 ROBO2Q9HCK4 1378 aa25.13■■□□□ 1.61
HMGN1-206ENST00000431390 PLEKHH1Q9ULM0 1364 aa25.13■■□□□ 1.61
HMGN1-206ENST00000431390 SPATA31A6Q5VVP1 1343 aa25.13■■□□□ 1.61
HMGN1-206ENST00000431390 CADPS2Q86UW7 1296 aa25.13■■□□□ 1.61
HMGN1-206ENST00000431390 MIER1Q8N108 512 aa25.13■■□□□ 1.61
HMGN1-206ENST00000431390 AMOTL2Q9Y2J4 779 aa25.13■■□□□ 1.61
HMGN1-206ENST00000431390 WAPLQ7Z5K2 1190 aa25.12■■□□□ 1.61
HMGN1-206ENST00000431390 ATF3P18847 181 aa25.11■■□□□ 1.61
HMGN1-206ENST00000431390 MEX3CQ5U5Q3 659 aaKnown RBP25.11■■□□□ 1.61
HMGN1-206ENST00000431390 C19orf44Q9H6X5 657 aa25.11■■□□□ 1.61
HMGN1-206ENST00000431390 MINK1Q8N4C8 1332 aaPredicted RBP25.1■■□□□ 1.61
HMGN1-206ENST00000431390 ADGRB2O60241 1585 aa25.09■■□□□ 1.61
HMGN1-206ENST00000431390 ANP32CO43423 234 aa25.08■■□□□ 1.61
HMGN1-206ENST00000431390 ZNF772Q68DY9 489 aaPredicted RBP25.05■■□□□ 1.6
HMGN1-206ENST00000431390 BRINP3Q76B58 766 aa25.05■■□□□ 1.6
HMGN1-206ENST00000431390 ATAD2Q6PL18 1390 aa25.04■■□□□ 1.6
HMGN1-206ENST00000431390 PANK3Q9H999 370 aa25.03■■□□□ 1.6
HMGN1-206ENST00000431390 NINLQ9Y2I6 1382 aa25.03■■□□□ 1.6
HMGN1-206ENST00000431390 NHSL1Q5SYE7 1610 aa25.03■■□□□ 1.6
HMGN1-206ENST00000431390 DCCP43146 1447 aa25.02■■□□□ 1.6
HMGN1-206ENST00000431390 SRPK2P78362 688 aaKnown RBP25.01■■□□□ 1.59
HMGN1-206ENST00000431390 CDK19Q9BWU1 502 aa25.01■■□□□ 1.59
HMGN1-206ENST00000431390 CABP2Q9NPB3 220 aa25.01■■□□□ 1.59
HMGN1-206ENST00000431390 WASLO00401 505 aaPredicted RBP25■■□□□ 1.59
HMGN1-206ENST00000431390 PER1O15534 1290 aaPredicted RBP25■■□□□ 1.59
HMGN1-206ENST00000431390 NUTM2BA6NNL0 878 aaPredicted RBP24.99■■□□□ 1.59
HMGN1-206ENST00000431390 NUTM2EB1AL46 878 aaPredicted RBP24.99■■□□□ 1.59
HMGN1-206ENST00000431390 NUTM2AQ8IVF1 878 aaPredicted RBP24.99■■□□□ 1.59
HMGN1-206ENST00000431390 UPF1Q92900 1129 aaKnown RBP eCLIP24.98■■□□□ 1.59
HMGN1-206ENST00000431390 MST1RQ04912 1400 aa24.98■■□□□ 1.59
HMGN1-206ENST00000431390 NALCNQ8IZF0 1738 aa24.97■■□□□ 1.59
HMGN1-206ENST00000431390 PRKRIP1Q9H875 184 aaPredicted RBP24.96■■□□□ 1.59
HMGN1-206ENST00000431390 TMC1Q8TDI8 760 aa24.95■■□□□ 1.58
HMGN1-206ENST00000431390 RXRBP28702 533 aa24.94■■□□□ 1.58
HMGN1-206ENST00000431390 KTN1Q86UP2 1357 aaKnown RBP24.94■■□□□ 1.58
HMGN1-206ENST00000431390 SLC12A5Q9H2X9 1139 aa24.93■■□□□ 1.58
HMGN1-206ENST00000431390 ANKRD36BQ8N2N9 1353 aa24.93■■□□□ 1.58
HMGN1-206ENST00000431390 AFF2P51816 1311 aa24.92■■□□□ 1.58
HMGN1-206ENST00000431390 CCER2I3L3R5 266 aa24.92■■□□□ 1.58
HMGN1-206ENST00000431390 CDK12Q9NYV4 1490 aaPredicted RBP24.91■■□□□ 1.58
HMGN1-206ENST00000431390 KNSTRNQ9Y448 316 aa24.91■■□□□ 1.58
HMGN1-206ENST00000431390 ADGRL3Q9HAR2 1447 aa24.9■■□□□ 1.58
HMGN1-206ENST00000431390 ATP7BP35670 1465 aa24.9■■□□□ 1.58
HMGN1-206ENST00000431390 USP32Q8NFA0 1604 aa24.89■■□□□ 1.58
HMGN1-206ENST00000431390 NPC1L1Q9UHC9 1359 aa24.89■■□□□ 1.58
HMGN1-206ENST00000431390 CDC42BPGQ6DT37 1551 aa24.89■■□□□ 1.57
HMGN1-206ENST00000431390 TOPAZ1Q8N9V7 1692 aa24.89■■□□□ 1.57
HMGN1-206ENST00000431390 DDX17Q92841 729 aaKnown RBP24.88■■□□□ 1.57
HMGN1-206ENST00000431390 NUDT16Q96DE0 195 aaKnown RBP24.87■■□□□ 1.57
HMGN1-206ENST00000431390 FMN2Q9NZ56 1722 aa24.87■■□□□ 1.57
HMGN1-206ENST00000431390 CD163L1Q9NR16 1453 aa24.86■■□□□ 1.57
HMGN1-206ENST00000431390 ITSN1Q15811 1721 aa24.86■■□□□ 1.57
HMGN1-206ENST00000431390 RALBP1Q15311 655 aa24.86■■□□□ 1.57
HMGN1-206ENST00000431390 LRRC59Q96AG4 307 aaKnown RBP24.86■■□□□ 1.57
HMGN1-206ENST00000431390 CARD14Q9BXL6 1004 aa24.86■■□□□ 1.57
HMGN1-206ENST00000431390 TERF2IPQ9NYB0 399 aa24.86■■□□□ 1.57
HMGN1-206ENST00000431390 PNPLA6Q8IY17 1366 aa24.85■■□□□ 1.57
HMGN1-206ENST00000431390 CCDC61Q9Y6R9 512 aa24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms