RNA–Protein interactions for RNA: ENST00000430149.2

CDKN1C-203, Transcript of cyclin dependent kinase inhibitor 1C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDKN1C, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1C-203ENST00000430149 CENPJQ9HC77 1338 aaPredicted RBP28.35■■■□□ 2.13
CDKN1C-203ENST00000430149 NCOA3Q9Y6Q9 1424 aa28.35■■■□□ 2.13
CDKN1C-203ENST00000430149 USP47Q96K76 1375 aa28.34■■■□□ 2.13
CDKN1C-203ENST00000430149 C19orf44Q9H6X5 657 aa28.33■■■□□ 2.13
CDKN1C-203ENST00000430149 MSH6P52701 1360 aa28.33■■■□□ 2.13
CDKN1C-203ENST00000430149 ST20-MTHFSA0A0A6YYL1 179 aa28.31■■■□□ 2.12
CDKN1C-203ENST00000430149 EIF3AQ14152 1382 aaKnown RBP28.3■■■□□ 2.12
CDKN1C-203ENST00000430149 QRICH2Q9H0J4 1663 aa28.28■■■□□ 2.12
CDKN1C-203ENST00000430149 IQSEC2Q5JU85 1478 aa28.28■■■□□ 2.12
CDKN1C-203ENST00000430149 NUTM2FA1L443 756 aa28.26■■■□□ 2.11
CDKN1C-203ENST00000430149 HSPA5P11021 654 aaKnown RBP28.25■■■□□ 2.11
CDKN1C-203ENST00000430149 ATF3P18847 181 aa28.25■■■□□ 2.11
CDKN1C-203ENST00000430149 UBAP1LF5GYI3 381 aa28.24■■■□□ 2.11
CDKN1C-203ENST00000430149 TESK2Q96S53 571 aa28.23■■■□□ 2.11
CDKN1C-203ENST00000430149 EIF4G2P78344 907 aaKnown RBP eCLIP28.22■■■□□ 2.11
CDKN1C-203ENST00000430149 CADPS2Q86UW7 1296 aa28.22■■■□□ 2.11
CDKN1C-203ENST00000430149 CDC42BPGQ6DT37 1551 aa28.22■■■□□ 2.11
CDKN1C-203ENST00000430149 WASLO00401 505 aaPredicted RBP28.21■■■□□ 2.11
CDKN1C-203ENST00000430149 ADGRB2O60241 1585 aa28.21■■■□□ 2.11
CDKN1C-203ENST00000430149 DCCP43146 1447 aa28.21■■■□□ 2.11
CDKN1C-203ENST00000430149 CDK19Q9BWU1 502 aa28.2■■■□□ 2.1
CDKN1C-203ENST00000430149 TULP4Q9NRJ4 1543 aa28.19■■■□□ 2.1
CDKN1C-203ENST00000430149 SLAIN2Q9P270 581 aa28.19■■■□□ 2.1
CDKN1C-203ENST00000430149 MST1RQ04912 1400 aa28.18■■■□□ 2.1
CDKN1C-203ENST00000430149 TOM1O60784 492 aa28.17■■■□□ 2.1
CDKN1C-203ENST00000430149 PIP4K2BP78356 416 aa28.17■■■□□ 2.1
CDKN1C-203ENST00000430149 CABP2Q9NPB3 220 aa28.16■■■□□ 2.1
CDKN1C-203ENST00000430149 FMN2Q9NZ56 1722 aa28.16■■■□□ 2.1
CDKN1C-203ENST00000430149 SBNO2Q9Y2G9 1366 aa28.16■■■□□ 2.1
CDKN1C-203ENST00000430149 PRR36Q9H6K5 1346 aa28.15■■■□□ 2.1
CDKN1C-203ENST00000430149 C1orf167Q5SNV9 1468 aa28.14■■■□□ 2.1
CDKN1C-203ENST00000430149 FBXO41Q8TF61 875 aa28.14■■■□□ 2.1
CDKN1C-203ENST00000430149 SCAF1Q9H7N4 1312 aaKnown RBP28.13■■■□□ 2.09
CDKN1C-203ENST00000430149 SRPK2P78362 688 aaKnown RBP28.12■■■□□ 2.09
CDKN1C-203ENST00000430149 ORAI2Q96SN7 254 aa28.12■■■□□ 2.09
CDKN1C-203ENST00000430149 EVC2Q86UK5 1308 aa28.12■■■□□ 2.09
CDKN1C-203ENST00000430149 DISP3Q9P2K9 1392 aa28.12■■■□□ 2.09
CDKN1C-203ENST00000430149 USP32Q8NFA0 1604 aa28.11■■■□□ 2.09
CDKN1C-203ENST00000430149 NUDT16Q96DE0 195 aaKnown RBP28.09■■■□□ 2.09
CDKN1C-203ENST00000430149 RGPD8O14715 1765 aaPredicted RBP28.09■■■□□ 2.09
CDKN1C-203ENST00000430149 ESCO1Q5FWF5 840 aa28.07■■■□□ 2.08
CDKN1C-203ENST00000430149 BRINP3Q76B58 766 aa28.07■■■□□ 2.08
CDKN1C-203ENST00000430149 ATP7BP35670 1465 aa28.07■■■□□ 2.08
CDKN1C-203ENST00000430149 ILDR1Q86SU0 546 aaPredicted RBP28.07■■■□□ 2.08
CDKN1C-203ENST00000430149 C11orf95C9JLR9 678 aaPredicted RBP28.06■■■□□ 2.08
CDKN1C-203ENST00000430149 TMF1P82094 1093 aa28.05■■■□□ 2.08
CDKN1C-203ENST00000430149 ANKARQ7Z5J8 1434 aa28.05■■■□□ 2.08
CDKN1C-203ENST00000430149 DDX17Q92841 729 aaKnown RBP28.04■■■□□ 2.08
CDKN1C-203ENST00000430149 ROBO1Q9Y6N7 1651 aa28.04■■■□□ 2.08
CDKN1C-203ENST00000430149 PMFBP1Q8TBY8 1022 aa28.03■■■□□ 2.08
CDKN1C-203ENST00000430149 PHF8Q9UPP1 1060 aa27.99■■■□□ 2.07
CDKN1C-203ENST00000430149 CCDC61Q9Y6R9 512 aa27.99■■■□□ 2.07
CDKN1C-203ENST00000430149 CABP1Q9NZU7 370 aa27.98■■■□□ 2.07
CDKN1C-203ENST00000430149 FOXO3O43524 673 aa27.97■■■□□ 2.07
CDKN1C-203ENST00000430149 POLR3GLQ9BT43 218 aa27.97■■■□□ 2.07
CDKN1C-203ENST00000430149 PPIP5K1Q6PFW1 1433 aa27.97■■■□□ 2.07
CDKN1C-203ENST00000430149 TOPAZ1Q8N9V7 1692 aa27.96■■■□□ 2.07
CDKN1C-203ENST00000430149 SLC24A1O60721 1099 aa27.96■■■□□ 2.07
CDKN1C-203ENST00000430149 XPCQ01831 940 aaPredicted RBP27.95■■■□□ 2.07
CDKN1C-203ENST00000430149 ATAD2Q6PL18 1390 aa27.95■■■□□ 2.06
CDKN1C-203ENST00000430149 ZNF316A6NFI3 1004 aaPredicted RBP27.94■■■□□ 2.06
CDKN1C-203ENST00000430149 TMC1Q8TDI8 760 aa27.94■■■□□ 2.06
CDKN1C-203ENST00000430149 SLC12A5Q9H2X9 1139 aa27.94■■■□□ 2.06
CDKN1C-203ENST00000430149 PLEKHG3A1L390 1219 aa27.92■■■□□ 2.06
CDKN1C-203ENST00000430149 PUS7Q96PZ0 661 aaKnown RBP27.92■■■□□ 2.06
CDKN1C-203ENST00000430149 ITSN1Q15811 1721 aa27.91■■■□□ 2.06
CDKN1C-203ENST00000430149 NGDNQ8NEJ9 315 aaKnown RBP27.9■■■□□ 2.06
CDKN1C-203ENST00000430149 ACEP12821 1306 aa27.9■■■□□ 2.06
CDKN1C-203ENST00000430149 KIF7Q2M1P5 1343 aa27.9■■■□□ 2.06
CDKN1C-203ENST00000430149 HSPA1LP34931 641 aa27.9■■■□□ 2.06
CDKN1C-203ENST00000430149 CDCA8Q53HL2 280 aa27.9■■■□□ 2.06
CDKN1C-203ENST00000430149 KIF1AQ12756 1690 aa27.88■■■□□ 2.05
CDKN1C-203ENST00000430149 NHSL1Q5SYE7 1610 aa27.87■■■□□ 2.05
CDKN1C-203ENST00000430149 WASHC2AQ641Q2 1341 aa27.86■■■□□ 2.05
CDKN1C-203ENST00000430149 AHDC1Q5TGY3 1603 aaPredicted RBP27.86■■■□□ 2.05
CDKN1C-203ENST00000430149 POLR3AO14802 1390 aaPredicted RBP27.86■■■□□ 2.05
CDKN1C-203ENST00000430149 NPHP3Q7Z494 1330 aa27.86■■■□□ 2.05
CDKN1C-203ENST00000430149 CD163L1Q9NR16 1453 aa27.85■■■□□ 2.05
CDKN1C-203ENST00000430149 PSME1Q06323 249 aa27.85■■■□□ 2.05
CDKN1C-203ENST00000430149 KRT28Q7Z3Y7 464 aa27.85■■■□□ 2.05
CDKN1C-203ENST00000430149 PXDNQ92626 1479 aa27.84■■■□□ 2.05
CDKN1C-203ENST00000430149 CCDC7Q96M83 1385 aa27.83■■■□□ 2.05
CDKN1C-203ENST00000430149 PHLPP1O60346 1717 aa27.83■■■□□ 2.05
CDKN1C-203ENST00000430149 MYOM1P52179 1685 aa27.83■■■□□ 2.05
CDKN1C-203ENST00000430149 SOS2Q07890 1332 aaPredicted RBP27.83■■■□□ 2.04
CDKN1C-203ENST00000430149 COL16A1Q07092 1604 aaPredicted RBP27.8■■■□□ 2.04
CDKN1C-203ENST00000430149 CPSF1Q10570 1443 aaKnown RBP27.8■■■□□ 2.04
CDKN1C-203ENST00000430149 A0A1W2PP64 1363 aa27.79■■■□□ 2.04
CDKN1C-203ENST00000430149 NINLQ9Y2I6 1382 aa27.77■■■□□ 2.04
CDKN1C-203ENST00000430149 USP6P35125 1406 aa27.76■■■□□ 2.03
CDKN1C-203ENST00000430149 KTN1Q86UP2 1357 aaKnown RBP27.76■■■□□ 2.03
CDKN1C-203ENST00000430149 AKAP12Q02952 1782 aa27.75■■■□□ 2.03
CDKN1C-203ENST00000430149 PAK3O75914 559 aaPredicted RBP27.75■■■□□ 2.03
CDKN1C-203ENST00000430149 TERF2IPQ9NYB0 399 aa27.75■■■□□ 2.03
CDKN1C-203ENST00000430149 HDGFL2Q7Z4V5 671 aaPredicted RBP27.74■■■□□ 2.03
CDKN1C-203ENST00000430149 TRPM3Q9HCF6 1732 aaPredicted RBP27.74■■■□□ 2.03
CDKN1C-203ENST00000430149 ANKRD36BQ8N2N9 1353 aa27.74■■■□□ 2.03
CDKN1C-203ENST00000430149 ZNF692Q9BU19 519 aaPredicted RBP27.73■■■□□ 2.03
CDKN1C-203ENST00000430149 SSH2Q76I76 1423 aa27.73■■■□□ 2.03
CDKN1C-203ENST00000430149 CARD14Q9BXL6 1004 aa27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms