RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 HSP90B1P14625 803 aaKnown RBP21.27■■□□□ 1
SMARCA4-203ENST00000429416 RAD21O60216 631 aa21.27■■□□□ 1
SMARCA4-203ENST00000429416 NBPF8Q3BBV2 869 aa21.27■■□□□ 1
SMARCA4-203ENST00000429416 TRIM34Q9BYJ4 488 aa21.26■□□□□ 0.99
SMARCA4-203ENST00000429416 RILPL2Q969X0 211 aa21.26■□□□□ 0.99
SMARCA4-203ENST00000429416 SPG7Q9UQ90 795 aa21.25■□□□□ 0.99
SMARCA4-203ENST00000429416 COG6Q9Y2V7 657 aa21.24■□□□□ 0.99
SMARCA4-203ENST00000429416 API5Q9BZZ5 524 aaKnown RBP21.23■□□□□ 0.99
SMARCA4-203ENST00000429416 PHF8Q9UPP1 1060 aa21.23■□□□□ 0.99
SMARCA4-203ENST00000429416 ANKRD45Q5TZF3 282 aa21.23■□□□□ 0.99
SMARCA4-203ENST00000429416 MFAP1P55081 439 aaKnown RBP21.22■□□□□ 0.99
SMARCA4-203ENST00000429416 ABCC5O15440 1437 aa21.22■□□□□ 0.99
SMARCA4-203ENST00000429416 TNRQ92752 1358 aa21.21■□□□□ 0.99
SMARCA4-203ENST00000429416 KIF6Q6ZMV9 814 aa21.21■□□□□ 0.99
SMARCA4-203ENST00000429416 G3BP1Q13283 466 aaKnown RBP eCLIP21.21■□□□□ 0.992e-7■■□□□ 14.1
SMARCA4-203ENST00000429416 ANP32EQ9BTT0 268 aa21.21■□□□□ 0.99
SMARCA4-203ENST00000429416 ATAD2Q6PL18 1390 aa21.21■□□□□ 0.99
SMARCA4-203ENST00000429416 NOL8Q76FK4 1167 aaKnown RBP21.2■□□□□ 0.99
SMARCA4-203ENST00000429416 PTMAP06454 111 aaKnown RBP21.2■□□□□ 0.98
SMARCA4-203ENST00000429416 DHX29Q7Z478 1369 aaKnown RBP21.2■□□□□ 0.98
SMARCA4-203ENST00000429416 ROCK1Q13464 1354 aa21.2■□□□□ 0.98
SMARCA4-203ENST00000429416 WASHC2AQ641Q2 1341 aa21.19■□□□□ 0.98
SMARCA4-203ENST00000429416 TOM1O60784 492 aa21.19■□□□□ 0.98
SMARCA4-203ENST00000429416 KCNH5Q8NCM2 988 aa21.19■□□□□ 0.98
SMARCA4-203ENST00000429416 TCP11L2Q8N4U5 519 aa21.19■□□□□ 0.98
SMARCA4-203ENST00000429416 IFIT2P09913 472 aaKnown RBP21.18■□□□□ 0.98
SMARCA4-203ENST00000429416 VPS53Q5VIR6 699 aa21.18■□□□□ 0.98
SMARCA4-203ENST00000429416 AMOTL1Q8IY63 956 aa21.18■□□□□ 0.98
SMARCA4-203ENST00000429416 ADAMTS8Q9UP79 889 aa21.18■□□□□ 0.98
SMARCA4-203ENST00000429416 ATP10BO94823 1461 aa21.18■□□□□ 0.98
SMARCA4-203ENST00000429416 PPP2R1AP30153 589 aa21.17■□□□□ 0.98
SMARCA4-203ENST00000429416 APPP05067 770 aa21.17■□□□□ 0.98
SMARCA4-203ENST00000429416 CADPS2Q86UW7 1296 aa21.17■□□□□ 0.98
SMARCA4-203ENST00000429416 ZNF428Q96B54 188 aa21.16■□□□□ 0.98
SMARCA4-203ENST00000429416 ADGRF5Q8IZF2 1346 aa21.16■□□□□ 0.98
SMARCA4-203ENST00000429416 NEUROD6Q96NK8 337 aa21.16■□□□□ 0.98
SMARCA4-203ENST00000429416 AMER1Q5JTC6 1135 aaPredicted RBP21.15■□□□□ 0.98
SMARCA4-203ENST00000429416 WDR7Q9Y4E6 1490 aa21.15■□□□□ 0.98
SMARCA4-203ENST00000429416 NAIPQ13075 1403 aa21.15■□□□□ 0.98
SMARCA4-203ENST00000429416 DZIP1LQ8IYY4 767 aaKnown RBP21.15■□□□□ 0.98
SMARCA4-203ENST00000429416 NCBP3Q53F19 620 aaKnown RBP21.14■□□□□ 0.97
SMARCA4-203ENST00000429416 LRRFIP1Q32MZ4 808 aaKnown RBP21.13■□□□□ 0.97
SMARCA4-203ENST00000429416 KRT28Q7Z3Y7 464 aa21.13■□□□□ 0.97
SMARCA4-203ENST00000429416 CTDP1Q9Y5B0 961 aaPredicted RBP21.13■□□□□ 0.97
SMARCA4-203ENST00000429416 BIVM-ERCC5R4GMW8 1640 aa21.13■□□□□ 0.97
SMARCA4-203ENST00000429416 CCDC30Q5VVM6 783 aa21.13■□□□□ 0.97
SMARCA4-203ENST00000429416 PLCH2O75038 1416 aa21.13■□□□□ 0.97
SMARCA4-203ENST00000429416 TRIM44Q96DX7 344 aaPredicted RBP21.12■□□□□ 0.97
SMARCA4-203ENST00000429416 CNTLNQ9NXG0 1405 aa21.12■□□□□ 0.97
SMARCA4-203ENST00000429416 DDX19BQ9UMR2 479 aa21.12■□□□□ 0.97
SMARCA4-203ENST00000429416 DIAPH3Q9NSV4 1193 aa21.11■□□□□ 0.97
SMARCA4-203ENST00000429416 KIF21AQ7Z4S6 1674 aa21.11■□□□□ 0.97
SMARCA4-203ENST00000429416 MARCH6O60337 910 aa21.11■□□□□ 0.97
SMARCA4-203ENST00000429416 SAMD1Q6SPF0 538 aaPredicted RBP21.11■□□□□ 0.97
SMARCA4-203ENST00000429416 THOC2Q8NI27 1593 aaKnown RBP21.1■□□□□ 0.97
SMARCA4-203ENST00000429416 MSH6P52701 1360 aa21.1■□□□□ 0.97
SMARCA4-203ENST00000429416 PTPN23Q9H3S7 1636 aa21.1■□□□□ 0.97
SMARCA4-203ENST00000429416 WASLO00401 505 aaPredicted RBP21.1■□□□□ 0.97
SMARCA4-203ENST00000429416 UBTFL1P0CB47 393 aaPredicted RBP21.1■□□□□ 0.97
SMARCA4-203ENST00000429416 MYL6BP14649 208 aa21.1■□□□□ 0.97
SMARCA4-203ENST00000429416 HDGFL1Q5TGJ6 251 aa21.1■□□□□ 0.97
SMARCA4-203ENST00000429416 RASSF8Q8NHQ8 419 aa21.09■□□□□ 0.97
SMARCA4-203ENST00000429416 NCOA1Q15788 1441 aa21.09■□□□□ 0.97
SMARCA4-203ENST00000429416 KIF16BQ96L93 1317 aa21.09■□□□□ 0.97
SMARCA4-203ENST00000429416 BICDL1Q6ZP65 573 aa21.08■□□□□ 0.97
SMARCA4-203ENST00000429416 CCDC27Q2M243 656 aa21.08■□□□□ 0.96
SMARCA4-203ENST00000429416 NME9Q86XW9 330 aa21.08■□□□□ 0.96
SMARCA4-203ENST00000429416 FAM135AQ9P2D6 1515 aa21.07■□□□□ 0.96
SMARCA4-203ENST00000429416 USHBP1Q8N6Y0 703 aa21.07■□□□□ 0.96
SMARCA4-203ENST00000429416 PTCD1O75127 700 aaKnown RBP21.07■□□□□ 0.96
SMARCA4-203ENST00000429416 CRBNQ96SW2 442 aa21.07■□□□□ 0.96
SMARCA4-203ENST00000429416 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.06■□□□□ 0.961e-8■■□□□ 13.7
SMARCA4-203ENST00000429416 LRPPRCP42704 1394 aaKnown RBP21.06■□□□□ 0.96
SMARCA4-203ENST00000429416 NOS1P29475 1434 aa21.06■□□□□ 0.96
SMARCA4-203ENST00000429416 FYB1O15117 783 aa21.06■□□□□ 0.96
SMARCA4-203ENST00000429416 CWC22Q9HCG8 908 aaKnown RBP21.06■□□□□ 0.96
SMARCA4-203ENST00000429416 NCKAP5LQ9HCH0 1330 aa21.06■□□□□ 0.96
SMARCA4-203ENST00000429416 GPATCH8Q9UKJ3 1502 aaKnown RBP21.06■□□□□ 0.96
SMARCA4-203ENST00000429416 EIF4G3O43432 1585 aaKnown RBP21.06■□□□□ 0.96
SMARCA4-203ENST00000429416 DHX16O60231 1041 aaKnown RBP21.05■□□□□ 0.96
SMARCA4-203ENST00000429416 KDM5BQ9UGL1 1544 aa21.05■□□□□ 0.96
SMARCA4-203ENST00000429416 ZBED9Q6R2W3 1325 aa21.05■□□□□ 0.96
SMARCA4-203ENST00000429416 RAPGEF6Q8TEU7 1601 aa21.05■□□□□ 0.96
SMARCA4-203ENST00000429416 TWISTNBQ3B726 338 aaPredicted RBP21.04■□□□□ 0.96
SMARCA4-203ENST00000429416 ZNF518AQ6AHZ1 1483 aa21.04■□□□□ 0.96
SMARCA4-203ENST00000429416 BTBD11A6QL63 1104 aa21.04■□□□□ 0.96
SMARCA4-203ENST00000429416 RRP1P56182 461 aaKnown RBP21.03■□□□□ 0.96
SMARCA4-203ENST00000429416 PNISRQ8TF01 805 aaKnown RBP21.03■□□□□ 0.96
SMARCA4-203ENST00000429416 A2MP01023 1474 aa21.03■□□□□ 0.96
SMARCA4-203ENST00000429416 CHRNA2Q15822 529 aa21.03■□□□□ 0.96
SMARCA4-203ENST00000429416 MPRIPQ6WCQ1 1025 aa21.03■□□□□ 0.96
SMARCA4-203ENST00000429416 EXOC6Q8TAG9 804 aa21.03■□□□□ 0.96
SMARCA4-203ENST00000429416 TMOD3Q9NYL9 352 aa21.02■□□□□ 0.96
SMARCA4-203ENST00000429416 AKAP17AQ02040 695 aaKnown RBP21.02■□□□□ 0.96
SMARCA4-203ENST00000429416 EXOSC9Q06265 439 aaKnown RBP21.02■□□□□ 0.96
SMARCA4-203ENST00000429416 HSP90AB4PQ58FF6 505 aa21.02■□□□□ 0.96
SMARCA4-203ENST00000429416 UHRF1BP1LA0JNW5 1464 aa21.02■□□□□ 0.96
SMARCA4-203ENST00000429416 NSD3Q9BZ95 1437 aa21.02■□□□□ 0.96
SMARCA4-203ENST00000429416 ERICH6BQ5W0A0 696 aa21.02■□□□□ 0.96
SMARCA4-203ENST00000429416 SYNE3Q6ZMZ3 975 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms