RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 ADGRB1O14514 1584 aa20.65■□□□□ 0.9
SGCE-204ENST00000428696 NCOA3Q9Y6Q9 1424 aa20.65■□□□□ 0.9
SGCE-204ENST00000428696 ILDR1Q86SU0 546 aaPredicted RBP20.64■□□□□ 0.89
SGCE-204ENST00000428696 TECPR2O15040 1411 aa20.63■□□□□ 0.89
SGCE-204ENST00000428696 XIRP1Q702N8 1843 aaKnown RBP20.62■□□□□ 0.89
SGCE-204ENST00000428696 PIAS4Q8N2W9 510 aaPredicted RBP20.61■□□□□ 0.89
SGCE-204ENST00000428696 FAM135BQ49AJ0 1406 aa20.61■□□□□ 0.89
SGCE-204ENST00000428696 ADGRL3Q9HAR2 1447 aa20.61■□□□□ 0.89
SGCE-204ENST00000428696 KIAA1210Q9ULL0 1709 aa20.59■□□□□ 0.89
SGCE-204ENST00000428696 CENPJQ9HC77 1338 aaPredicted RBP20.59■□□□□ 0.89
SGCE-204ENST00000428696 TRPM1Q7Z4N2 1603 aa20.58■□□□□ 0.89
SGCE-204ENST00000428696 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.57■□□□□ 0.88
SGCE-204ENST00000428696 ESCO1Q5FWF5 840 aa20.56■□□□□ 0.88
SGCE-204ENST00000428696 RALGAPBQ86X10 1494 aa20.56■□□□□ 0.88
SGCE-204ENST00000428696 DLC1Q96QB1 1528 aa20.56■□□□□ 0.88
SGCE-204ENST00000428696 KNDC1Q76NI1 1749 aa20.55■□□□□ 0.88
SGCE-204ENST00000428696 EIF3AQ14152 1382 aaKnown RBP20.54■□□□□ 0.88
SGCE-204ENST00000428696 ORAI2Q96SN7 254 aa20.53■□□□□ 0.88
SGCE-204ENST00000428696 CDK19Q9BWU1 502 aa20.53■□□□□ 0.88
SGCE-204ENST00000428696 NALCNQ8IZF0 1738 aa20.53■□□□□ 0.88
SGCE-204ENST00000428696 WASLO00401 505 aaPredicted RBP20.53■□□□□ 0.88
SGCE-204ENST00000428696 SRPK2P78362 688 aaKnown RBP20.53■□□□□ 0.88
SGCE-204ENST00000428696 DCCP43146 1447 aa20.52■□□□□ 0.88
SGCE-204ENST00000428696 GPRASP1Q5JY77 1395 aa20.52■□□□□ 0.88
SGCE-204ENST00000428696 ST20-MTHFSA0A0A6YYL1 179 aa20.51■□□□□ 0.87
SGCE-204ENST00000428696 HSPA1LP34931 641 aa20.51■□□□□ 0.87
SGCE-204ENST00000428696 BRINP3Q76B58 766 aa20.51■□□□□ 0.87
SGCE-204ENST00000428696 MST1RQ04912 1400 aa20.49■□□□□ 0.87
SGCE-204ENST00000428696 DDX17Q92841 729 aaKnown RBP20.49■□□□□ 0.87
SGCE-204ENST00000428696 ARHGEF28Q8N1W1 1705 aaKnown RBP20.48■□□□□ 0.87
SGCE-204ENST00000428696 CABP2Q9NPB3 220 aa20.48■□□□□ 0.87
SGCE-204ENST00000428696 C1orf167Q5SNV9 1468 aa20.48■□□□□ 0.87
SGCE-204ENST00000428696 PMFBP1Q8TBY8 1022 aa20.47■□□□□ 0.87
SGCE-204ENST00000428696 EVC2Q86UK5 1308 aa20.47■□□□□ 0.87
SGCE-204ENST00000428696 NUDT16Q96DE0 195 aaKnown RBP20.46■□□□□ 0.87
SGCE-204ENST00000428696 USP47Q96K76 1375 aa20.46■□□□□ 0.87
SGCE-204ENST00000428696 FOXO3O43524 673 aa20.45■□□□□ 0.86
SGCE-204ENST00000428696 XPCQ01831 940 aaPredicted RBP20.44■□□□□ 0.86
SGCE-204ENST00000428696 CDC42BPGQ6DT37 1551 aa20.44■□□□□ 0.86
SGCE-204ENST00000428696 EIF4G2P78344 907 aaKnown RBP eCLIP20.44■□□□□ 0.86
SGCE-204ENST00000428696 PHF8Q9UPP1 1060 aa20.44■□□□□ 0.86
SGCE-204ENST00000428696 ROBO1Q9Y6N7 1651 aa20.43■□□□□ 0.86
SGCE-204ENST00000428696 PSME1Q06323 249 aa20.42■□□□□ 0.86
SGCE-204ENST00000428696 NGDNQ8NEJ9 315 aaKnown RBP20.42■□□□□ 0.86
SGCE-204ENST00000428696 PRR36Q9H6K5 1346 aa20.41■□□□□ 0.86
SGCE-204ENST00000428696 QRICH2Q9H0J4 1663 aa20.4■□□□□ 0.86
SGCE-204ENST00000428696 HSPA5P11021 654 aaKnown RBP20.39■□□□□ 0.85
SGCE-204ENST00000428696 POLR3GLQ9BT43 218 aa20.39■□□□□ 0.85
SGCE-204ENST00000428696 CCDC61Q9Y6R9 512 aa20.39■□□□□ 0.85
SGCE-204ENST00000428696 PLEKHG5O94827 1062 aa20.38■□□□□ 0.85
SGCE-204ENST00000428696 TMC1Q8TDI8 760 aa20.38■□□□□ 0.85
SGCE-204ENST00000428696 TMF1P82094 1093 aa20.37■□□□□ 0.85
SGCE-204ENST00000428696 LMOD2Q6P5Q4 547 aa20.37■□□□□ 0.85
SGCE-204ENST00000428696 KRT28Q7Z3Y7 464 aa20.37■□□□□ 0.85
SGCE-204ENST00000428696 FMN2Q9NZ56 1722 aa20.37■□□□□ 0.85
SGCE-204ENST00000428696 SLC24A1O60721 1099 aa20.36■□□□□ 0.85
SGCE-204ENST00000428696 TESK2Q96S53 571 aa20.36■□□□□ 0.85
SGCE-204ENST00000428696 CABP1Q9NZU7 370 aa20.36■□□□□ 0.85
SGCE-204ENST00000428696 NPHP3Q7Z494 1330 aa20.36■□□□□ 0.85
SGCE-204ENST00000428696 ADGRB2O60241 1585 aa20.36■□□□□ 0.85
SGCE-204ENST00000428696 ANKARQ7Z5J8 1434 aa20.36■□□□□ 0.85
SGCE-204ENST00000428696 TULP4Q9NRJ4 1543 aa20.35■□□□□ 0.85
SGCE-204ENST00000428696 PAK3O75914 559 aaPredicted RBP20.35■□□□□ 0.85
SGCE-204ENST00000428696 LRRC59Q96AG4 307 aaKnown RBP20.34■□□□□ 0.85
SGCE-204ENST00000428696 ZEB1P37275 1124 aaPredicted RBP20.32■□□□□ 0.84
SGCE-204ENST00000428696 ACEP12821 1306 aa20.32■□□□□ 0.84
SGCE-204ENST00000428696 RGPD8O14715 1765 aaPredicted RBP20.32■□□□□ 0.84
SGCE-204ENST00000428696 PPIP5K1Q6PFW1 1433 aa20.31■□□□□ 0.84
SGCE-204ENST00000428696 PHLPP1O60346 1717 aa20.31■□□□□ 0.84
SGCE-204ENST00000428696 SBNO2Q9Y2G9 1366 aa20.3■□□□□ 0.84
SGCE-204ENST00000428696 NUTM2BA6NNL0 878 aaPredicted RBP20.3■□□□□ 0.84
SGCE-204ENST00000428696 NUTM2EB1AL46 878 aaPredicted RBP20.3■□□□□ 0.84
SGCE-204ENST00000428696 NUTM2AQ8IVF1 878 aaPredicted RBP20.3■□□□□ 0.84
SGCE-204ENST00000428696 ATP7BP35670 1465 aa20.29■□□□□ 0.84
SGCE-204ENST00000428696 PLEKHG3A1L390 1219 aa20.29■□□□□ 0.84
SGCE-204ENST00000428696 CDCA8Q53HL2 280 aa20.29■□□□□ 0.84
SGCE-204ENST00000428696 DISP3Q9P2K9 1392 aa20.29■□□□□ 0.84
SGCE-204ENST00000428696 SLC12A5Q9H2X9 1139 aa20.28■□□□□ 0.84
SGCE-204ENST00000428696 USP32Q8NFA0 1604 aa20.28■□□□□ 0.84
SGCE-204ENST00000428696 ATAD2Q6PL18 1390 aa20.28■□□□□ 0.84
SGCE-204ENST00000428696 SOS2Q07890 1332 aaPredicted RBP20.28■□□□□ 0.84
SGCE-204ENST00000428696 JCADQ9P266 1359 aa20.26■□□□□ 0.83
SGCE-204ENST00000428696 AHDC1Q5TGY3 1603 aaPredicted RBP20.25■□□□□ 0.83
SGCE-204ENST00000428696 HAP1P54257 671 aaPredicted RBP20.24■□□□□ 0.83
SGCE-204ENST00000428696 HDGFL2Q7Z4V5 671 aaPredicted RBP20.24■□□□□ 0.83
SGCE-204ENST00000428696 NUTM2GQ5VZR2 741 aa20.23■□□□□ 0.83
SGCE-204ENST00000428696 KIF1AQ12756 1690 aa20.23■□□□□ 0.83
SGCE-204ENST00000428696 MEX3CQ5U5Q3 659 aaKnown RBP20.22■□□□□ 0.83
SGCE-204ENST00000428696 PUS7Q96PZ0 661 aaKnown RBP20.22■□□□□ 0.83
SGCE-204ENST00000428696 TERF2IPQ9NYB0 399 aa20.22■□□□□ 0.83
SGCE-204ENST00000428696 SPATA31A3Q5VYP0 1347 aa20.22■□□□□ 0.83
SGCE-204ENST00000428696 ZNF692Q9BU19 519 aaPredicted RBP20.21■□□□□ 0.83
SGCE-204ENST00000428696 NHSL1Q5SYE7 1610 aa20.21■□□□□ 0.83
SGCE-204ENST00000428696 PXDNQ92626 1479 aa20.21■□□□□ 0.83
SGCE-204ENST00000428696 COL16A1Q07092 1604 aaPredicted RBP20.2■□□□□ 0.82
SGCE-204ENST00000428696 ABTB2Q8N961 1025 aa20.2■□□□□ 0.82
SGCE-204ENST00000428696 CABLES1Q8TDN4 633 aa20.2■□□□□ 0.82
SGCE-204ENST00000428696 C11orf95C9JLR9 678 aaPredicted RBP20.19■□□□□ 0.82
SGCE-204ENST00000428696 ADAMTS2O95450 1211 aa20.19■□□□□ 0.82
SGCE-204ENST00000428696 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.19■□□□□ 0.827e-6■■□□□ 11.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms