RNA–Protein interactions for RNA: ENST00000428239.5

CDC7-203, Transcript of cell division cycle 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC7, Length 3,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7-203ENST00000428239 HAP1P54257 671 aaPredicted RBP9.77□□□□□ -0.85
CDC7-203ENST00000428239 TMF1P82094 1093 aa9.77□□□□□ -0.85
CDC7-203ENST00000428239 XPCQ01831 940 aaPredicted RBP9.77□□□□□ -0.85
CDC7-203ENST00000428239 LRRC7Q96NW7 1537 aa9.77□□□□□ -0.85
CDC7-203ENST00000428239 HSPA5P11021 654 aaKnown RBP9.76□□□□□ -0.85
CDC7-203ENST00000428239 NRXN1Q9ULB1 1477 aa9.75□□□□□ -0.85
CDC7-203ENST00000428239 WASLO00401 505 aaPredicted RBP9.75□□□□□ -0.85
CDC7-203ENST00000428239 FOXO3O43524 673 aa9.75□□□□□ -0.85
CDC7-203ENST00000428239 PSME1Q06323 249 aa9.75□□□□□ -0.85
CDC7-203ENST00000428239 RALGAPBQ86X10 1494 aa9.75□□□□□ -0.85
CDC7-203ENST00000428239 NRXN3Q9Y4C0 1643 aa9.75□□□□□ -0.85
CDC7-203ENST00000428239 ORAI2Q96SN7 254 aa9.75□□□□□ -0.85
CDC7-203ENST00000428239 LAMC1P11047 1609 aa9.75□□□□□ -0.85
CDC7-203ENST00000428239 IFT172Q9UG01 1749 aa9.74□□□□□ -0.85
CDC7-203ENST00000428239 PTCH1Q13635 1447 aa9.74□□□□□ -0.85
CDC7-203ENST00000428239 CDCA8Q53HL2 280 aa9.74□□□□□ -0.85
CDC7-203ENST00000428239 ADGRL3Q9HAR2 1447 aa9.74□□□□□ -0.85
CDC7-203ENST00000428239 SLC24A1O60721 1099 aa9.74□□□□□ -0.85
CDC7-203ENST00000428239 NUDT16Q96DE0 195 aaKnown RBP9.74□□□□□ -0.85
CDC7-203ENST00000428239 DDX17Q92841 729 aaKnown RBP9.73□□□□□ -0.85
CDC7-203ENST00000428239 SIRT1Q96EB6 747 aa9.73□□□□□ -0.85
CDC7-203ENST00000428239 ASXL1Q8IXJ9 1541 aa9.73□□□□□ -0.85
CDC7-203ENST00000428239 FAM135BQ49AJ0 1406 aa9.73□□□□□ -0.85
CDC7-203ENST00000428239 PHF8Q9UPP1 1060 aa9.72□□□□□ -0.85
CDC7-203ENST00000428239 FBXO41Q8TF61 875 aa9.72□□□□□ -0.85
CDC7-203ENST00000428239 ZBTB7CA1YPR0 619 aa9.72□□□□□ -0.85
CDC7-203ENST00000428239 LTBP4Q8N2S1 1624 aa9.72□□□□□ -0.85
CDC7-203ENST00000428239 CCDC61Q9Y6R9 512 aa9.71□□□□□ -0.85
CDC7-203ENST00000428239 ADGRB1O14514 1584 aa9.71□□□□□ -0.86
CDC7-203ENST00000428239 CABP1Q9NZU7 370 aa9.71□□□□□ -0.86
CDC7-203ENST00000428239 CHD2O14647 1828 aaKnown RBP9.71□□□□□ -0.86
CDC7-203ENST00000428239 NUTM2BA6NNL0 878 aaPredicted RBP9.71□□□□□ -0.86
CDC7-203ENST00000428239 NUTM2EB1AL46 878 aaPredicted RBP9.71□□□□□ -0.86
CDC7-203ENST00000428239 SOX12O15370 315 aa9.71□□□□□ -0.86
CDC7-203ENST00000428239 NUTM2AQ8IVF1 878 aaPredicted RBP9.71□□□□□ -0.86
CDC7-203ENST00000428239 HDGFL2Q7Z4V5 671 aaPredicted RBP9.7□□□□□ -0.86
CDC7-203ENST00000428239 GPRASP1Q5JY77 1395 aa9.7□□□□□ -0.86
CDC7-203ENST00000428239 TRPM1Q7Z4N2 1603 aa9.7□□□□□ -0.86
CDC7-203ENST00000428239 TECPR2O15040 1411 aa9.7□□□□□ -0.86
CDC7-203ENST00000428239 BRINP3Q76B58 766 aa9.7□□□□□ -0.86
CDC7-203ENST00000428239 NUTM2GQ5VZR2 741 aa9.69□□□□□ -0.86
CDC7-203ENST00000428239 HSPA1LP34931 641 aa9.69□□□□□ -0.86
CDC7-203ENST00000428239 NPHP3Q7Z494 1330 aa9.69□□□□□ -0.86
CDC7-203ENST00000428239 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.69□□□□□ -0.861e-8■■□□□ 12
CDC7-203ENST00000428239 NWD1Q149M9 1564 aa9.69□□□□□ -0.86
CDC7-203ENST00000428239 KRT28Q7Z3Y7 464 aa9.68□□□□□ -0.86
CDC7-203ENST00000428239 TERF2IPQ9NYB0 399 aa9.68□□□□□ -0.86
CDC7-203ENST00000428239 NCOA3Q9Y6Q9 1424 aa9.68□□□□□ -0.86
CDC7-203ENST00000428239 STRCP1A6NGW2 1772 aa9.68□□□□□ -0.86
CDC7-203ENST00000428239 MEX3CQ5U5Q3 659 aaKnown RBP9.68□□□□□ -0.86
CDC7-203ENST00000428239 SLC12A5Q9H2X9 1139 aa9.68□□□□□ -0.86
CDC7-203ENST00000428239 XRN1Q8IZH2 1706 aaKnown RBP9.68□□□□□ -0.86
CDC7-203ENST00000428239 ILDR1Q86SU0 546 aaPredicted RBP9.67□□□□□ -0.86
CDC7-203ENST00000428239 ATAD2Q6PL18 1390 aa9.67□□□□□ -0.86
CDC7-203ENST00000428239 DLC1Q96QB1 1528 aa9.67□□□□□ -0.86
CDC7-203ENST00000428239 ACEP12821 1306 aa9.66□□□□□ -0.86
CDC7-203ENST00000428239 C1orf167Q5SNV9 1468 aa9.66□□□□□ -0.86
CDC7-203ENST00000428239 KIAA1210Q9ULL0 1709 aa9.66□□□□□ -0.86
CDC7-203ENST00000428239 PRR36Q9H6K5 1346 aa9.66□□□□□ -0.86
CDC7-203ENST00000428239 PPIP5K1Q6PFW1 1433 aa9.66□□□□□ -0.86
CDC7-203ENST00000428239 ABTB2Q8N961 1025 aa9.66□□□□□ -0.86
CDC7-203ENST00000428239 TESK2Q96S53 571 aa9.66□□□□□ -0.86
CDC7-203ENST00000428239 DCCP43146 1447 aa9.65□□□□□ -0.86
CDC7-203ENST00000428239 LRRC59Q96AG4 307 aaKnown RBP9.65□□□□□ -0.86
CDC7-203ENST00000428239 MST1RQ04912 1400 aa9.65□□□□□ -0.86
CDC7-203ENST00000428239 SETD1AO15047 1707 aaKnown RBP9.65□□□□□ -0.86
CDC7-203ENST00000428239 DISP3Q9P2K9 1392 aa9.65□□□□□ -0.87
CDC7-203ENST00000428239 ADAMTS2O95450 1211 aa9.64□□□□□ -0.87
CDC7-203ENST00000428239 PHF23Q9BUL5 403 aaPredicted RBP9.64□□□□□ -0.87
CDC7-203ENST00000428239 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.64□□□□□ -0.87
CDC7-203ENST00000428239 NLRP6P59044 892 aa9.63□□□□□ -0.87
CDC7-203ENST00000428239 ARHGEF28Q8N1W1 1705 aaKnown RBP9.63□□□□□ -0.87
CDC7-203ENST00000428239 IQSEC2Q5JU85 1478 aa9.63□□□□□ -0.87
CDC7-203ENST00000428239 KTN1Q86UP2 1357 aaKnown RBP9.63□□□□□ -0.87
CDC7-203ENST00000428239 QRICH2Q9H0J4 1663 aa9.63□□□□□ -0.87
CDC7-203ENST00000428239 NALCNQ8IZF0 1738 aa9.63□□□□□ -0.87
CDC7-203ENST00000428239 TNNT2P45379 298 aaPredicted RBP9.62□□□□□ -0.87
CDC7-203ENST00000428239 CABLES1Q8TDN4 633 aa9.62□□□□□ -0.87
CDC7-203ENST00000428239 ZNF692Q9BU19 519 aaPredicted RBP9.62□□□□□ -0.87
CDC7-203ENST00000428239 KNSTRNQ9Y448 316 aa9.62□□□□□ -0.87
CDC7-203ENST00000428239 DDX10Q13206 875 aaKnown RBP9.62□□□□□ -0.87
CDC7-203ENST00000428239 KNDC1Q76NI1 1749 aa9.61□□□□□ -0.87
CDC7-203ENST00000428239 CDC42BPGQ6DT37 1551 aa9.61□□□□□ -0.87
CDC7-203ENST00000428239 ANKARQ7Z5J8 1434 aa9.61□□□□□ -0.87
CDC7-203ENST00000428239 PANK3Q9H999 370 aa9.61□□□□□ -0.87
CDC7-203ENST00000428239 KIF7Q2M1P5 1343 aa9.61□□□□□ -0.87
CDC7-203ENST00000428239 TULP4Q9NRJ4 1543 aa9.61□□□□□ -0.87
CDC7-203ENST00000428239 SBNO2Q9Y2G9 1366 aa9.61□□□□□ -0.87
CDC7-203ENST00000428239 PPM1GO15355 546 aaPredicted RBP9.61□□□□□ -0.87
CDC7-203ENST00000428239 CCDC9Q9Y3X0 531 aaKnown RBP9.6□□□□□ -0.87
CDC7-203ENST00000428239 PLEKHG3A1L390 1219 aa9.6□□□□□ -0.87
CDC7-203ENST00000428239 ZNF316A6NFI3 1004 aaPredicted RBP9.6□□□□□ -0.87
CDC7-203ENST00000428239 C11orf95C9JLR9 678 aaPredicted RBP9.6□□□□□ -0.87
CDC7-203ENST00000428239 NLRP13Q86W25 1043 aa9.59□□□□□ -0.87
CDC7-203ENST00000428239 C8orf37Q96NL8 207 aa9.59□□□□□ -0.87
CDC7-203ENST00000428239 ZC3H6P61129 1189 aaKnown RBP9.59□□□□□ -0.87
CDC7-203ENST00000428239 A0A0G2JS52 829 aa9.59□□□□□ -0.87
CDC7-203ENST00000428239 MYT1Q01538 1121 aa9.59□□□□□ -0.87
CDC7-203ENST00000428239 NGLY1Q96IV0 654 aa9.59□□□□□ -0.87
CDC7-203ENST00000428239 COG3Q96JB2 828 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms