RNA–Protein interactions for RNA: ENST00000428154.5

PMPCB-202, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 1 (best) BASIC

Gene PMPCB, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-202ENST00000428154 RIMBP3Q9UFD9 1639 aa26.4■■□□□ 1.82
PMPCB-202ENST00000428154 NCBP3Q53F19 620 aaKnown RBP26.4■■□□□ 1.82
PMPCB-202ENST00000428154 TULP4Q9NRJ4 1543 aa26.4■■□□□ 1.82
PMPCB-202ENST00000428154 E9PSI1 815 aa26.39■■□□□ 1.81
PMPCB-202ENST00000428154 CYB5RLQ6IPT4 315 aa26.39■■□□□ 1.81
PMPCB-202ENST00000428154 SLC12A5Q9H2X9 1139 aa26.38■■□□□ 1.81
PMPCB-202ENST00000428154 NKTRP30414 1462 aaKnown RBP26.37■■□□□ 1.81
PMPCB-202ENST00000428154 MYO5BQ9ULV0 1848 aa26.37■■□□□ 1.81
PMPCB-202ENST00000428154 MS4A1P11836 297 aa26.36■■□□□ 1.81
PMPCB-202ENST00000428154 FAM69CQ0P6D2 419 aa26.35■■□□□ 1.81
PMPCB-202ENST00000428154 CFAP53Q96M91 514 aa26.35■■□□□ 1.81
PMPCB-202ENST00000428154 SHPRHQ149N8 1683 aa26.35■■□□□ 1.81
PMPCB-202ENST00000428154 APAF1O14727 1248 aa26.34■■□□□ 1.81
PMPCB-202ENST00000428154 CLTCQ00610 1675 aaKnown RBP26.34■■□□□ 1.81
PMPCB-202ENST00000428154 MSH5O43196 834 aa26.33■■□□□ 1.81
PMPCB-202ENST00000428154 ATAD2Q6PL18 1390 aa26.33■■□□□ 1.8
PMPCB-202ENST00000428154 CRBNQ96SW2 442 aa26.31■■□□□ 1.8
PMPCB-202ENST00000428154 ERICH6Q7L0X2 663 aa26.31■■□□□ 1.8
PMPCB-202ENST00000428154 CCDC146Q8IYE0 955 aa26.3■■□□□ 1.8
PMPCB-202ENST00000428154 PTPRMP28827 1452 aa26.3■■□□□ 1.8
PMPCB-202ENST00000428154 RUNDC1Q96C34 613 aa26.29■■□□□ 1.8
PMPCB-202ENST00000428154 YTHDC2Q9H6S0 1430 aaKnown RBP26.28■■□□□ 1.8
PMPCB-202ENST00000428154 SPATA31D1Q6ZQQ2 1576 aa26.28■■□□□ 1.8
PMPCB-202ENST00000428154 MED14O60244 1454 aa26.28■■□□□ 1.8
PMPCB-202ENST00000428154 PLIN1O60240 522 aa26.27■■□□□ 1.8
PMPCB-202ENST00000428154 ABCC11Q96J66 1382 aa26.26■■□□□ 1.79
PMPCB-202ENST00000428154 ALKQ9UM73 1620 aa26.26■■□□□ 1.79
PMPCB-202ENST00000428154 DLC1Q96QB1 1528 aa26.25■■□□□ 1.79
PMPCB-202ENST00000428154 ANP32AP39687 249 aaKnown RBP26.25■■□□□ 1.79
PMPCB-202ENST00000428154 CCDC27Q2M243 656 aa26.25■■□□□ 1.79
PMPCB-202ENST00000428154 ANKRD26Q9UPS8 1709 aa26.23■■□□□ 1.79
PMPCB-202ENST00000428154 IQSEC2Q5JU85 1478 aa26.23■■□□□ 1.79
PMPCB-202ENST00000428154 NUTM2DQ5VT03 806 aaPredicted RBP26.23■■□□□ 1.79
PMPCB-202ENST00000428154 TERF2IPQ9NYB0 399 aa26.23■■□□□ 1.79
PMPCB-202ENST00000428154 WDR63Q8IWG1 891 aa26.22■■□□□ 1.79
PMPCB-202ENST00000428154 CENPQQ7L2Z9 268 aaPredicted RBP26.22■■□□□ 1.79
PMPCB-202ENST00000428154 WWC1Q8IX03 1113 aa26.22■■□□□ 1.79
PMPCB-202ENST00000428154 TSPOAP1O95153 1857 aa26.22■■□□□ 1.79
PMPCB-202ENST00000428154 PHF23Q9BUL5 403 aaPredicted RBP26.21■■□□□ 1.79
PMPCB-202ENST00000428154 MTHFSP49914 203 aa26.2■■□□□ 1.79
PMPCB-202ENST00000428154 CABP2Q9NPB3 220 aa26.2■■□□□ 1.79
PMPCB-202ENST00000428154 STAG3Q9UJ98 1225 aa26.2■■□□□ 1.79
PMPCB-202ENST00000428154 SRPK2P78362 688 aaKnown RBP26.19■■□□□ 1.78
PMPCB-202ENST00000428154 POGKQ9P215 609 aa26.19■■□□□ 1.78
PMPCB-202ENST00000428154 A0A1W2PP64 1363 aa26.18■■□□□ 1.78
PMPCB-202ENST00000428154 ARHGEF40Q8TER5 1519 aa26.18■■□□□ 1.78
PMPCB-202ENST00000428154 A2ML1A8K2U0 1454 aa26.18■■□□□ 1.78
PMPCB-202ENST00000428154 KDM2BQ8NHM5 1336 aa26.17■■□□□ 1.78
PMPCB-202ENST00000428154 PDE3AQ14432 1141 aa26.17■■□□□ 1.78
PMPCB-202ENST00000428154 FBXO31Q5XUX0 539 aaPredicted RBP26.17■■□□□ 1.78
PMPCB-202ENST00000428154 AAMPQ13685 434 aa26.15■■□□□ 1.78
PMPCB-202ENST00000428154 C20orf194Q5TEA3 1177 aa26.15■■□□□ 1.78
PMPCB-202ENST00000428154 PRAM1Q96QH2 718 aa26.15■■□□□ 1.78
PMPCB-202ENST00000428154 SPINK5Q9NQ38 1064 aaPredicted RBP26.15■■□□□ 1.78
PMPCB-202ENST00000428154 STK26Q9P289 416 aa26.15■■□□□ 1.78
PMPCB-202ENST00000428154 ADGRB2O60241 1585 aa26.14■■□□□ 1.77
PMPCB-202ENST00000428154 HDGFL2Q7Z4V5 671 aaPredicted RBP26.14■■□□□ 1.77
PMPCB-202ENST00000428154 TCP11L2Q8N4U5 519 aa26.14■■□□□ 1.77
PMPCB-202ENST00000428154 IPO9Q96P70 1041 aaKnown RBP26.14■■□□□ 1.77
PMPCB-202ENST00000428154 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.13■■□□□ 1.77
PMPCB-202ENST00000428154 BACH2Q9BYV9 841 aa26.13■■□□□ 1.77
PMPCB-202ENST00000428154 RIMS2Q9UQ26 1411 aa26.12■■□□□ 1.77
PMPCB-202ENST00000428154 PDE4AP27815 886 aa26.12■■□□□ 1.77
PMPCB-202ENST00000428154 NOP58Q9Y2X3 529 aaKnown RBP26.12■■□□□ 1.77
PMPCB-202ENST00000428154 TNNT2P45379 298 aaPredicted RBP26.11■■□□□ 1.77
PMPCB-202ENST00000428154 SETD1AO15047 1707 aaKnown RBP26.11■■□□□ 1.77
PMPCB-202ENST00000428154 CD163L1Q9NR16 1453 aa26.1■■□□□ 1.77
PMPCB-202ENST00000428154 PNNQ9H307 717 aaKnown RBP26.09■■□□□ 1.77
PMPCB-202ENST00000428154 ATP7BP35670 1465 aa26.09■■□□□ 1.77
PMPCB-202ENST00000428154 HDGFP51858 240 aaKnown RBP26.08■■□□□ 1.77
PMPCB-202ENST00000428154 MINK1Q8N4C8 1332 aaPredicted RBP26.08■■□□□ 1.77
PMPCB-202ENST00000428154 KIF20BQ96Q89 1820 aa26.08■■□□□ 1.77
PMPCB-202ENST00000428154 CT47B1P0C2W7 299 aaPredicted RBP26.08■■□□□ 1.76
PMPCB-202ENST00000428154 SAFB2Q14151 953 aaKnown RBP eCLIP26.08■■□□□ 1.76
PMPCB-202ENST00000428154 MYH16Q9H6N6 1097 aa26.08■■□□□ 1.76
PMPCB-202ENST00000428154 NLRP1Q9C000 1473 aa26.07■■□□□ 1.76
PMPCB-202ENST00000428154 CDK19Q9BWU1 502 aa26.06■■□□□ 1.76
PMPCB-202ENST00000428154 COL3A1P02461 1466 aaPredicted RBP26.05■■□□□ 1.76
PMPCB-202ENST00000428154 SIRT1Q96EB6 747 aa26.05■■□□□ 1.76
PMPCB-202ENST00000428154 KIF13AQ9H1H9 1805 aa26.05■■□□□ 1.76
PMPCB-202ENST00000428154 FYB1O15117 783 aa26.04■■□□□ 1.76
PMPCB-202ENST00000428154 U2AF1L5P0DN76 240 aaPredicted RBP26.04■■□□□ 1.76
PMPCB-202ENST00000428154 U2AF1Q01081 240 aaKnown RBP eCLIP26.04■■□□□ 1.76
PMPCB-202ENST00000428154 DMRT2Q9Y5R5 561 aa26.04■■□□□ 1.76
PMPCB-202ENST00000428154 BCAR3O75815 825 aa26.02■■□□□ 1.76
PMPCB-202ENST00000428154 KNDC1Q76NI1 1749 aa26.02■■□□□ 1.76
PMPCB-202ENST00000428154 ESF1Q9H501 851 aaKnown RBP26.02■■□□□ 1.76
PMPCB-202ENST00000428154 PNPLA6Q8IY17 1366 aa26.02■■□□□ 1.76
PMPCB-202ENST00000428154 ZBTB47Q9UFB7 747 aaPredicted RBP26.01■■□□□ 1.75
PMPCB-202ENST00000428154 CDC42BPGQ6DT37 1551 aa25.99■■□□□ 1.75
PMPCB-202ENST00000428154 FAM135BQ49AJ0 1406 aa25.99■■□□□ 1.75
PMPCB-202ENST00000428154 IL16Q14005 1332 aa25.99■■□□□ 1.75
PMPCB-202ENST00000428154 CANXP27824 592 aaKnown RBP25.99■■□□□ 1.75
PMPCB-202ENST00000428154 RARSP54136 660 aaKnown RBP25.99■■□□□ 1.75
PMPCB-202ENST00000428154 GGNBP2Q9H3C7 697 aa25.99■■□□□ 1.75
PMPCB-202ENST00000428154 ZMYM3Q14202 1370 aa25.98■■□□□ 1.75
PMPCB-202ENST00000428154 NRXN3Q9Y4C0 1643 aa25.98■■□□□ 1.75
PMPCB-202ENST00000428154 TECPR2O15040 1411 aa25.97■■□□□ 1.75
PMPCB-202ENST00000428154 NEUROD2Q15784 382 aa25.97■■□□□ 1.75
PMPCB-202ENST00000428154 PLEKHF1Q96S99 279 aa25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms