RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 POGKQ9P215 609 aa29.98■■■□□ 2.39
HSPG2-205ENST00000427897 ESCO1Q5FWF5 840 aa29.97■■■□□ 2.39
HSPG2-205ENST00000427897 SIRT1Q96EB6 747 aa29.97■■■□□ 2.39
HSPG2-205ENST00000427897 ORAI2Q96SN7 254 aa29.97■■■□□ 2.39
HSPG2-205ENST00000427897 SPATA31A6Q5VVP1 1343 aa29.96■■■□□ 2.39
HSPG2-205ENST00000427897 NUTM2FA1L443 756 aa29.96■■■□□ 2.39
HSPG2-205ENST00000427897 DDX17Q92841 729 aaKnown RBP29.96■■■□□ 2.39
HSPG2-205ENST00000427897 PLEKHH1Q9ULM0 1364 aa29.94■■■□□ 2.38
HSPG2-205ENST00000427897 SAFB2Q14151 953 aaKnown RBP eCLIP29.94■■■□□ 2.38
HSPG2-205ENST00000427897 NUTM2BA6NNL0 878 aaPredicted RBP29.93■■■□□ 2.38
HSPG2-205ENST00000427897 NUTM2EB1AL46 878 aaPredicted RBP29.93■■■□□ 2.38
HSPG2-205ENST00000427897 SOCS7O14512 581 aa29.93■■■□□ 2.38
HSPG2-205ENST00000427897 NUTM2AQ8IVF1 878 aaPredicted RBP29.93■■■□□ 2.38
HSPG2-205ENST00000427897 PRAM1Q96QH2 718 aa29.93■■■□□ 2.38
HSPG2-205ENST00000427897 NHSL1Q5SYE7 1610 aa29.93■■■□□ 2.38
HSPG2-205ENST00000427897 CDC42BPGQ6DT37 1551 aa29.92■■■□□ 2.38
HSPG2-205ENST00000427897 TRAK1Q9UPV9 953 aa29.92■■■□□ 2.38
HSPG2-205ENST00000427897 SHPRHQ149N8 1683 aa29.89■■■□□ 2.38
HSPG2-205ENST00000427897 TRIM26Q12899 539 aaPredicted RBP29.88■■■□□ 2.37
HSPG2-205ENST00000427897 NPHP3Q7Z494 1330 aa29.84■■■□□ 2.37
HSPG2-205ENST00000427897 NEUROD1Q13562 356 aa29.83■■■□□ 2.37
HSPG2-205ENST00000427897 RGS17Q9UGC6 210 aaPredicted RBP29.83■■■□□ 2.37
HSPG2-205ENST00000427897 FOXO3O43524 673 aa29.82■■■□□ 2.36
HSPG2-205ENST00000427897 DLC1Q96QB1 1528 aa29.81■■■□□ 2.36
HSPG2-205ENST00000427897 ADGRB1O14514 1584 aa29.8■■■□□ 2.36
HSPG2-205ENST00000427897 FMN2Q9NZ56 1722 aa29.79■■■□□ 2.36
HSPG2-205ENST00000427897 SOS2Q07890 1332 aaPredicted RBP29.79■■■□□ 2.36
HSPG2-205ENST00000427897 SIN3AQ96ST3 1273 aa29.79■■■□□ 2.36
HSPG2-205ENST00000427897 MINK1Q8N4C8 1332 aaPredicted RBP29.77■■■□□ 2.36
HSPG2-205ENST00000427897 HIRIP3Q9BW71 556 aaPredicted RBP29.77■■■□□ 2.36
HSPG2-205ENST00000427897 LRP6O75581 1613 aa29.77■■■□□ 2.36
HSPG2-205ENST00000427897 PNPLA6Q8IY17 1366 aa29.77■■■□□ 2.36
HSPG2-205ENST00000427897 XPCQ01831 940 aaPredicted RBP29.76■■■□□ 2.35
HSPG2-205ENST00000427897 ZNF772Q68DY9 489 aaPredicted RBP29.75■■■□□ 2.35
HSPG2-205ENST00000427897 POTEAQ6S8J7 498 aa29.75■■■□□ 2.35
HSPG2-205ENST00000427897 PHF8Q9UPP1 1060 aa29.73■■■□□ 2.35
HSPG2-205ENST00000427897 L3MBTL2Q969R5 705 aa29.72■■■□□ 2.35
HSPG2-205ENST00000427897 RGPD8O14715 1765 aaPredicted RBP29.7■■■□□ 2.35
HSPG2-205ENST00000427897 KIF1AQ12756 1690 aa29.7■■■□□ 2.35
HSPG2-205ENST00000427897 ADAMTS2O95450 1211 aa29.7■■■□□ 2.35
HSPG2-205ENST00000427897 KRT28Q7Z3Y7 464 aa29.7■■■□□ 2.35
HSPG2-205ENST00000427897 C8orf37Q96NL8 207 aa29.7■■■□□ 2.35
HSPG2-205ENST00000427897 KIAA1210Q9ULL0 1709 aa29.7■■■□□ 2.34
HSPG2-205ENST00000427897 EIF3AQ14152 1382 aaKnown RBP29.69■■■□□ 2.34
HSPG2-205ENST00000427897 PSME1Q06323 249 aa29.69■■■□□ 2.34
HSPG2-205ENST00000427897 NBPF1Q3BBV0 1214 aa29.67■■■□□ 2.34
HSPG2-205ENST00000427897 WASLO00401 505 aaPredicted RBP29.66■■■□□ 2.34
HSPG2-205ENST00000427897 PMFBP1Q8TBY8 1022 aa29.66■■■□□ 2.34
HSPG2-205ENST00000427897 NGLY1Q96IV0 654 aa29.66■■■□□ 2.34
HSPG2-205ENST00000427897 AFF2P51816 1311 aa29.65■■■□□ 2.34
HSPG2-205ENST00000427897 ADGRB2O60241 1585 aa29.64■■■□□ 2.34
HSPG2-205ENST00000427897 ANKARQ7Z5J8 1434 aa29.64■■■□□ 2.34
HSPG2-205ENST00000427897 PXDNQ92626 1479 aa29.64■■■□□ 2.34
HSPG2-205ENST00000427897 ARHGEF28Q8N1W1 1705 aaKnown RBP29.64■■■□□ 2.34
HSPG2-205ENST00000427897 LMOD2Q6P5Q4 547 aa29.62■■■□□ 2.33
HSPG2-205ENST00000427897 HAP1P54257 671 aaPredicted RBP29.61■■■□□ 2.33
HSPG2-205ENST00000427897 SPATA31A3Q5VYP0 1347 aa29.59■■■□□ 2.33
HSPG2-205ENST00000427897 PLEKHG5O94827 1062 aa29.57■■■□□ 2.32
HSPG2-205ENST00000427897 RXRBP28702 533 aa29.57■■■□□ 2.32
HSPG2-205ENST00000427897 NGDNQ8NEJ9 315 aaKnown RBP29.57■■■□□ 2.32
HSPG2-205ENST00000427897 TULP4Q9NRJ4 1543 aa29.56■■■□□ 2.32
HSPG2-205ENST00000427897 GPRASP1Q5JY77 1395 aa29.56■■■□□ 2.32
HSPG2-205ENST00000427897 CDK19Q9BWU1 502 aa29.56■■■□□ 2.32
HSPG2-205ENST00000427897 COL22A1Q8NFW1 1626 aaPredicted RBP29.56■■■□□ 2.32
HSPG2-205ENST00000427897 USP32Q8NFA0 1604 aa29.55■■■□□ 2.32
HSPG2-205ENST00000427897 NUDT16Q96DE0 195 aaKnown RBP29.54■■■□□ 2.32
HSPG2-205ENST00000427897 QTRT2Q9H974 415 aaKnown RBP29.54■■■□□ 2.32
HSPG2-205ENST00000427897 TONSLQ96HA7 1378 aa29.53■■■□□ 2.32
HSPG2-205ENST00000427897 CENPJQ9HC77 1338 aaPredicted RBP29.53■■■□□ 2.32
HSPG2-205ENST00000427897 PRR36Q9H6K5 1346 aa29.52■■■□□ 2.32
HSPG2-205ENST00000427897 USP21Q9UK80 565 aa29.52■■■□□ 2.32
HSPG2-205ENST00000427897 ROCK2O75116 1388 aaKnown RBP29.52■■■□□ 2.32
HSPG2-205ENST00000427897 SRPK2P78362 688 aaKnown RBP29.5■■■□□ 2.31
HSPG2-205ENST00000427897 TNS3Q68CZ2 1445 aa29.5■■■□□ 2.31
HSPG2-205ENST00000427897 SBNO1A3KN83 1393 aa29.5■■■□□ 2.31
HSPG2-205ENST00000427897 PAK3O75914 559 aaPredicted RBP29.49■■■□□ 2.31
HSPG2-205ENST00000427897 ARHGEF10O15013 1369 aa29.48■■■□□ 2.31
HSPG2-205ENST00000427897 TRPM1Q7Z4N2 1603 aa29.48■■■□□ 2.31
HSPG2-205ENST00000427897 ITSN1Q15811 1721 aa29.48■■■□□ 2.31
HSPG2-205ENST00000427897 RBM6P78332 1123 aaKnown RBP29.45■■■□□ 2.31
HSPG2-205ENST00000427897 CCDC61Q9Y6R9 512 aa29.45■■■□□ 2.31
HSPG2-205ENST00000427897 CABLES1Q8TDN4 633 aa29.44■■■□□ 2.3
HSPG2-205ENST00000427897 TRPC5Q9UL62 973 aaPredicted RBP29.44■■■□□ 2.3
HSPG2-205ENST00000427897 FNBP4Q8N3X1 1017 aaPredicted RBP29.43■■■□□ 2.3
HSPG2-205ENST00000427897 MARF1Q9Y4F3 1742 aaKnown RBP29.42■■■□□ 2.3
HSPG2-205ENST00000427897 QRICH2Q9H0J4 1663 aa29.42■■■□□ 2.3
HSPG2-205ENST00000427897 ATP7BP35670 1465 aa29.42■■■□□ 2.3
HSPG2-205ENST00000427897 NBPF8Q3BBV2 869 aa29.41■■■□□ 2.3
HSPG2-205ENST00000427897 CABP2Q9NPB3 220 aa29.4■■■□□ 2.3
HSPG2-205ENST00000427897 CARD11Q9BXL7 1154 aa29.38■■■□□ 2.29
HSPG2-205ENST00000427897 ACEP12821 1306 aa29.38■■■□□ 2.29
HSPG2-205ENST00000427897 EVC2Q86UK5 1308 aa29.38■■■□□ 2.29
HSPG2-205ENST00000427897 PCGF6Q9BYE7 350 aa29.37■■■□□ 2.29
HSPG2-205ENST00000427897 TRPM3Q9HCF6 1732 aaPredicted RBP29.34■■■□□ 2.29
HSPG2-205ENST00000427897 PLEKHG3A1L390 1219 aa29.34■■■□□ 2.29
HSPG2-205ENST00000427897 CDK12Q9NYV4 1490 aaPredicted RBP29.34■■■□□ 2.29
HSPG2-205ENST00000427897 PPIP5K1Q6PFW1 1433 aa29.32■■■□□ 2.28
HSPG2-205ENST00000427897 UNC5CLQ8IV45 518 aa29.31■■■□□ 2.28
HSPG2-205ENST00000427897 TOPAZ1Q8N9V7 1692 aa29.29■■■□□ 2.28
HSPG2-205ENST00000427897 ALS2Q96Q42 1657 aa29.29■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms