RNA–Protein interactions for RNA: ENST00000426981.5

LIMS2-211, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 1,409 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-211ENST00000426981 AHDC1Q5TGY3 1603 aaPredicted RBP24.82■■□□□ 1.56
LIMS2-211ENST00000426981 LRPPRCP42704 1394 aaKnown RBP24.82■■□□□ 1.56
LIMS2-211ENST00000426981 PLEKHH1Q9ULM0 1364 aa24.82■■□□□ 1.56
LIMS2-211ENST00000426981 C14orf93Q9H972 538 aaKnown RBP24.81■■□□□ 1.56
LIMS2-211ENST00000426981 KDM2AQ9Y2K7 1162 aa24.81■■□□□ 1.56
LIMS2-211ENST00000426981 MYOM2P54296 1465 aa24.8■■□□□ 1.56
LIMS2-211ENST00000426981 RGS17Q9UGC6 210 aaPredicted RBP24.79■■□□□ 1.56
LIMS2-211ENST00000426981 JCADQ9P266 1359 aa24.78■■□□□ 1.56
LIMS2-211ENST00000426981 C1orf167Q5SNV9 1468 aa24.78■■□□□ 1.56
LIMS2-211ENST00000426981 YTHDC2Q9H6S0 1430 aaKnown RBP24.78■■□□□ 1.56
LIMS2-211ENST00000426981 SUPT16HQ9Y5B9 1047 aaKnown RBP24.78■■□□□ 1.56
LIMS2-211ENST00000426981 ABCC11Q96J66 1382 aa24.77■■□□□ 1.56
LIMS2-211ENST00000426981 TECPR2O15040 1411 aa24.77■■□□□ 1.56
LIMS2-211ENST00000426981 DCAF11Q8TEB1 546 aa24.77■■□□□ 1.56
LIMS2-211ENST00000426981 ORAI2Q96SN7 254 aa24.77■■□□□ 1.56
LIMS2-211ENST00000426981 KNDC1Q76NI1 1749 aa24.76■■□□□ 1.55
LIMS2-211ENST00000426981 NHSL1Q5SYE7 1610 aa24.75■■□□□ 1.55
LIMS2-211ENST00000426981 NUTM2FA1L443 756 aa24.73■■□□□ 1.55
LIMS2-211ENST00000426981 SOCS7O14512 581 aa24.71■■□□□ 1.55
LIMS2-211ENST00000426981 LRP6O75581 1613 aa24.71■■□□□ 1.55
LIMS2-211ENST00000426981 LAMC1P11047 1609 aa24.7■■□□□ 1.54
LIMS2-211ENST00000426981 SAFB2Q14151 953 aaKnown RBP eCLIP24.69■■□□□ 1.54
LIMS2-211ENST00000426981 CDC42BPGQ6DT37 1551 aa24.68■■□□□ 1.54
LIMS2-211ENST00000426981 SHPRHQ149N8 1683 aa24.68■■□□□ 1.54
LIMS2-211ENST00000426981 ADGRB1O14514 1584 aa24.68■■□□□ 1.54
LIMS2-211ENST00000426981 CCER2I3L3R5 266 aa24.68■■□□□ 1.54
LIMS2-211ENST00000426981 POTEAQ6S8J7 498 aa24.66■■□□□ 1.54
LIMS2-211ENST00000426981 PRAM1Q96QH2 718 aa24.66■■□□□ 1.54
LIMS2-211ENST00000426981 NUTM2BA6NNL0 878 aaPredicted RBP24.65■■□□□ 1.54
LIMS2-211ENST00000426981 NUTM2EB1AL46 878 aaPredicted RBP24.65■■□□□ 1.54
LIMS2-211ENST00000426981 ESCO1Q5FWF5 840 aa24.65■■□□□ 1.54
LIMS2-211ENST00000426981 NUTM2AQ8IVF1 878 aaPredicted RBP24.65■■□□□ 1.54
LIMS2-211ENST00000426981 TRAK1Q9UPV9 953 aa24.65■■□□□ 1.54
LIMS2-211ENST00000426981 SIRT1Q96EB6 747 aa24.64■■□□□ 1.54
LIMS2-211ENST00000426981 SPATA31A6Q5VVP1 1343 aa24.63■■□□□ 1.53
LIMS2-211ENST00000426981 LRRC59Q96AG4 307 aaKnown RBP24.62■■□□□ 1.53
LIMS2-211ENST00000426981 FMN2Q9NZ56 1722 aa24.61■■□□□ 1.53
LIMS2-211ENST00000426981 SIN3AQ96ST3 1273 aa24.61■■□□□ 1.53
LIMS2-211ENST00000426981 XPCQ01831 940 aaPredicted RBP24.61■■□□□ 1.53
LIMS2-211ENST00000426981 PNPLA6Q8IY17 1366 aa24.6■■□□□ 1.53
LIMS2-211ENST00000426981 SOS2Q07890 1332 aaPredicted RBP24.6■■□□□ 1.53
LIMS2-211ENST00000426981 RGPD8O14715 1765 aaPredicted RBP24.6■■□□□ 1.53
LIMS2-211ENST00000426981 FOXO3O43524 673 aa24.59■■□□□ 1.53
LIMS2-211ENST00000426981 MEX3CQ5U5Q3 659 aaKnown RBP24.59■■□□□ 1.53
LIMS2-211ENST00000426981 POGKQ9P215 609 aa24.59■■□□□ 1.53
LIMS2-211ENST00000426981 DLC1Q96QB1 1528 aa24.58■■□□□ 1.53
LIMS2-211ENST00000426981 HIRIP3Q9BW71 556 aaPredicted RBP24.57■■□□□ 1.52
LIMS2-211ENST00000426981 STAC3Q96MF2 364 aa24.56■■□□□ 1.52
LIMS2-211ENST00000426981 MINK1Q8N4C8 1332 aaPredicted RBP24.54■■□□□ 1.52
LIMS2-211ENST00000426981 PXDNQ92626 1479 aa24.53■■□□□ 1.52
LIMS2-211ENST00000426981 NBPF1Q3BBV0 1214 aa24.52■■□□□ 1.52
LIMS2-211ENST00000426981 L3MBTL2Q969R5 705 aa24.52■■□□□ 1.52
LIMS2-211ENST00000426981 NPHP3Q7Z494 1330 aa24.51■■□□□ 1.51
LIMS2-211ENST00000426981 ARHGEF28Q8N1W1 1705 aaKnown RBP24.5■■□□□ 1.51
LIMS2-211ENST00000426981 USP32Q8NFA0 1604 aa24.5■■□□□ 1.51
LIMS2-211ENST00000426981 ADAMTS2O95450 1211 aa24.49■■□□□ 1.51
LIMS2-211ENST00000426981 ANP32CO43423 234 aa24.48■■□□□ 1.51
LIMS2-211ENST00000426981 PHF8Q9UPP1 1060 aa24.47■■□□□ 1.51
LIMS2-211ENST00000426981 ADGRB2O60241 1585 aa24.47■■□□□ 1.51
LIMS2-211ENST00000426981 NEFLP07196 543 aa24.46■■□□□ 1.51
LIMS2-211ENST00000426981 C8orf37Q96NL8 207 aa24.46■■□□□ 1.51
LIMS2-211ENST00000426981 AFF2P51816 1311 aa24.46■■□□□ 1.51
LIMS2-211ENST00000426981 PRR36Q9H6K5 1346 aa24.46■■□□□ 1.51
LIMS2-211ENST00000426981 PMFBP1Q8TBY8 1022 aa24.45■■□□□ 1.51
LIMS2-211ENST00000426981 TONSLQ96HA7 1378 aa24.45■■□□□ 1.5
LIMS2-211ENST00000426981 KIAA1210Q9ULL0 1709 aa24.45■■□□□ 1.5
LIMS2-211ENST00000426981 KRT28Q7Z3Y7 464 aa24.44■■□□□ 1.5
LIMS2-211ENST00000426981 KIF1AQ12756 1690 aa24.44■■□□□ 1.5
LIMS2-211ENST00000426981 WASLO00401 505 aaPredicted RBP24.43■■□□□ 1.5
LIMS2-211ENST00000426981 COL22A1Q8NFW1 1626 aaPredicted RBP24.42■■□□□ 1.5
LIMS2-211ENST00000426981 ZNF772Q68DY9 489 aaPredicted RBP24.42■■□□□ 1.5
LIMS2-211ENST00000426981 TSHZ2Q9NRE2 1034 aa24.42■■□□□ 1.5
LIMS2-211ENST00000426981 SPATA31A3Q5VYP0 1347 aa24.4■■□□□ 1.5
LIMS2-211ENST00000426981 ANKARQ7Z5J8 1434 aa24.39■■□□□ 1.5
LIMS2-211ENST00000426981 PLEKHG5O94827 1062 aa24.39■■□□□ 1.5
LIMS2-211ENST00000426981 DDX10Q13206 875 aaKnown RBP24.38■■□□□ 1.49
LIMS2-211ENST00000426981 NGLY1Q96IV0 654 aa24.38■■□□□ 1.49
LIMS2-211ENST00000426981 TULP4Q9NRJ4 1543 aa24.37■■□□□ 1.49
LIMS2-211ENST00000426981 PSME1Q06323 249 aa24.35■■□□□ 1.49
LIMS2-211ENST00000426981 NBPF8Q3BBV2 869 aa24.35■■□□□ 1.49
LIMS2-211ENST00000426981 CDK19Q9BWU1 502 aa24.35■■□□□ 1.49
LIMS2-211ENST00000426981 CABLES1Q8TDN4 633 aa24.34■■□□□ 1.49
LIMS2-211ENST00000426981 QTRT2Q9H974 415 aaKnown RBP24.34■■□□□ 1.49
LIMS2-211ENST00000426981 TRPM1Q7Z4N2 1603 aa24.33■■□□□ 1.49
LIMS2-211ENST00000426981 LMOD2Q6P5Q4 547 aa24.33■■□□□ 1.49
LIMS2-211ENST00000426981 NUDT16Q96DE0 195 aaKnown RBP24.33■■□□□ 1.49
LIMS2-211ENST00000426981 TNS3Q68CZ2 1445 aa24.32■■□□□ 1.48
LIMS2-211ENST00000426981 RXRBP28702 533 aa24.32■■□□□ 1.48
LIMS2-211ENST00000426981 ATP7BP35670 1465 aa24.32■■□□□ 1.48
LIMS2-211ENST00000426981 MARF1Q9Y4F3 1742 aaKnown RBP24.3■■□□□ 1.48
LIMS2-211ENST00000426981 TRPM3Q9HCF6 1732 aaPredicted RBP24.3■■□□□ 1.48
LIMS2-211ENST00000426981 SBNO1A3KN83 1393 aa24.29■■□□□ 1.48
LIMS2-211ENST00000426981 EIF3AQ14152 1382 aaKnown RBP24.29■■□□□ 1.48
LIMS2-211ENST00000426981 USP21Q9UK80 565 aa24.29■■□□□ 1.48
LIMS2-211ENST00000426981 ERICH6BQ5W0A0 696 aa24.28■■□□□ 1.48
LIMS2-211ENST00000426981 FNBP4Q8N3X1 1017 aaPredicted RBP24.28■■□□□ 1.48
LIMS2-211ENST00000426981 CENPJQ9HC77 1338 aaPredicted RBP24.28■■□□□ 1.48
LIMS2-211ENST00000426981 NGDNQ8NEJ9 315 aaKnown RBP24.27■■□□□ 1.48
LIMS2-211ENST00000426981 ANP32EQ9BTT0 268 aa24.27■■□□□ 1.48
LIMS2-211ENST00000426981 QRICH2Q9H0J4 1663 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 181.5 ms