RNA–Protein interactions for RNA: ENST00000426142.6

CTNND1-207, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-207ENST00000426142 GPRASP1Q5JY77 1395 aa9.69□□□□□ -0.86
CTNND1-207ENST00000426142 LRRFIP1Q32MZ4 808 aaKnown RBP9.69□□□□□ -0.86
CTNND1-207ENST00000426142 ROCK1Q13464 1354 aa9.69□□□□□ -0.86
CTNND1-207ENST00000426142 SNAPC4Q5SXM2 1469 aa9.69□□□□□ -0.86
CTNND1-207ENST00000426142 PHF14O94880 888 aa9.69□□□□□ -0.86
CTNND1-207ENST00000426142 REC8O95072 547 aa9.68□□□□□ -0.86
CTNND1-207ENST00000426142 NFXL1Q6ZNB6 911 aa9.68□□□□□ -0.86
CTNND1-207ENST00000426142 RBM33Q96EV2 1170 aaKnown RBP9.68□□□□□ -0.86
CTNND1-207ENST00000426142 CTDP1Q9Y5B0 961 aaPredicted RBP9.68□□□□□ -0.86
CTNND1-207ENST00000426142 RBM42Q9BTD8 480 aaKnown RBP9.68□□□□□ -0.86
CTNND1-207ENST00000426142 DDX11L8A8MPP1 907 aa9.68□□□□□ -0.86
CTNND1-207ENST00000426142 PRKAR2BP31323 418 aa9.68□□□□□ -0.86
CTNND1-207ENST00000426142 CDCA7LQ96GN5 454 aa9.68□□□□□ -0.86
CTNND1-207ENST00000426142 C9orf84Q5VXU9 1444 aa9.68□□□□□ -0.86
CTNND1-207ENST00000426142 CPLX1O14810 134 aa9.67□□□□□ -0.86
CTNND1-207ENST00000426142 TRIM29Q14134 588 aa9.67□□□□□ -0.86
CTNND1-207ENST00000426142 CDK19Q9BWU1 502 aa9.67□□□□□ -0.86
CTNND1-207ENST00000426142 CCDC27Q2M243 656 aa9.67□□□□□ -0.86
CTNND1-207ENST00000426142 TCP11L2Q8N4U5 519 aa9.67□□□□□ -0.86
CTNND1-207ENST00000426142 SLC12A5Q9H2X9 1139 aa9.67□□□□□ -0.86
CTNND1-207ENST00000426142 KDM4AO75164 1064 aa9.67□□□□□ -0.86
CTNND1-207ENST00000426142 UBTFL1P0CB47 393 aaPredicted RBP9.67□□□□□ -0.86
CTNND1-207ENST00000426142 WWC1Q8IX03 1113 aa9.67□□□□□ -0.86
CTNND1-207ENST00000426142 NUTM2BA6NNL0 878 aaPredicted RBP9.67□□□□□ -0.86
CTNND1-207ENST00000426142 NUTM2EB1AL46 878 aaPredicted RBP9.67□□□□□ -0.86
CTNND1-207ENST00000426142 PPP2R1AP30153 589 aa9.67□□□□□ -0.86
CTNND1-207ENST00000426142 WASHC4Q2M389 1173 aa9.67□□□□□ -0.86
CTNND1-207ENST00000426142 NUTM2AQ8IVF1 878 aaPredicted RBP9.67□□□□□ -0.86
CTNND1-207ENST00000426142 TCEAL9Q9UHQ7 104 aa9.67□□□□□ -0.86
CTNND1-207ENST00000426142 TRDNQ13061 729 aa9.67□□□□□ -0.86
CTNND1-207ENST00000426142 CABP1Q9NZU7 370 aa9.67□□□□□ -0.86
CTNND1-207ENST00000426142 IFT140Q96RY7 1462 aa9.66□□□□□ -0.86
CTNND1-207ENST00000426142 STAC3Q96MF2 364 aa9.66□□□□□ -0.86
CTNND1-207ENST00000426142 SLC26A8Q96RN1 970 aa9.66□□□□□ -0.86
CTNND1-207ENST00000426142 MTMR7Q9Y216 660 aa9.66□□□□□ -0.86
CTNND1-207ENST00000426142 TOPBP1Q92547 1522 aa9.66□□□□□ -0.86
CTNND1-207ENST00000426142 C1orf115Q9H7X2 142 aa9.66□□□□□ -0.86
CTNND1-207ENST00000426142 CPLX2Q6PUV4 134 aaKnown RBP9.65□□□□□ -0.86
CTNND1-207ENST00000426142 ATP6V1DQ9Y5K8 247 aa9.65□□□□□ -0.86
CTNND1-207ENST00000426142 VPS37CA5D8V6 355 aaPredicted RBP9.65□□□□□ -0.86
CTNND1-207ENST00000426142 XPCQ01831 940 aaPredicted RBP9.65□□□□□ -0.86
CTNND1-207ENST00000426142 BECN2A8MW95 431 aa9.65□□□□□ -0.87
CTNND1-207ENST00000426142 GOLGA6L19H0YKK7 550 aa9.65□□□□□ -0.87
CTNND1-207ENST00000426142 RNF20Q5VTR2 975 aa9.65□□□□□ -0.87
CTNND1-207ENST00000426142 INTS3Q68E01 1043 aaKnown RBP9.65□□□□□ -0.87
CTNND1-207ENST00000426142 TSR2Q969E8 191 aaKnown RBP9.65□□□□□ -0.87
CTNND1-207ENST00000426142 ERICH3Q5RHP9 1530 aa9.65□□□□□ -0.87
CTNND1-207ENST00000426142 TPM3P06753 285 aa9.64□□□□□ -0.87
CTNND1-207ENST00000426142 EXOSC9Q06265 439 aaKnown RBP9.64□□□□□ -0.87
CTNND1-207ENST00000426142 POLA1P09884 1462 aaPredicted RBP9.64□□□□□ -0.87
CTNND1-207ENST00000426142 ERICH2A1L162 156 aa9.64□□□□□ -0.87
CTNND1-207ENST00000426142 ERC2O15083 957 aa9.64□□□□□ -0.87
CTNND1-207ENST00000426142 A0A0U1RQG5 324 aaPredicted RBP9.64□□□□□ -0.87
CTNND1-207ENST00000426142 DDX54Q8TDD1 881 aaKnown RBP9.64□□□□□ -0.87
CTNND1-207ENST00000426142 EHBP1L1Q8N3D4 1523 aa9.64□□□□□ -0.87
CTNND1-207ENST00000426142 PLEKHO1Q53GL0 409 aaPredicted RBP9.64□□□□□ -0.87
CTNND1-207ENST00000426142 CEP89Q96ST8 783 aa9.64□□□□□ -0.87
CTNND1-207ENST00000426142 NBPF8Q3BBV2 869 aa9.64□□□□□ -0.87
CTNND1-207ENST00000426142 HSP90AB4PQ58FF6 505 aa9.64□□□□□ -0.87
CTNND1-207ENST00000426142 THEMISQ8N1K5 641 aaPredicted RBP9.64□□□□□ -0.87
CTNND1-207ENST00000426142 GAS2L2Q8NHY3 880 aa9.64□□□□□ -0.87
CTNND1-207ENST00000426142 CCDC30Q5VVM6 783 aa9.63□□□□□ -0.87
CTNND1-207ENST00000426142 SULT6B1Q6IMI4 303 aa9.63□□□□□ -0.87
CTNND1-207ENST00000426142 DNAJC2Q99543 621 aaKnown RBP9.63□□□□□ -0.87
CTNND1-207ENST00000426142 CHMP4CQ96CF2 233 aa9.63□□□□□ -0.87
CTNND1-207ENST00000426142 BICD2Q8TD16 824 aa9.63□□□□□ -0.87
CTNND1-207ENST00000426142 BRD4O60885 1362 aaPredicted RBP9.62□□□□□ -0.87
CTNND1-207ENST00000426142 SMG6Q86US8 1419 aaKnown RBP9.62□□□□□ -0.87
CTNND1-207ENST00000426142 SURF6O75683 361 aaKnown RBP9.62□□□□□ -0.87
CTNND1-207ENST00000426142 KIF6Q6ZMV9 814 aa9.62□□□□□ -0.87
CTNND1-207ENST00000426142 TOM1L2Q6ZVM7 507 aa9.62□□□□□ -0.87
CTNND1-207ENST00000426142 CNKSR2Q8WXI2 1034 aa9.62□□□□□ -0.87
CTNND1-207ENST00000426142 HECW1Q76N89 1606 aa9.62□□□□□ -0.87
CTNND1-207ENST00000426142 PIP4K2BP78356 416 aa9.62□□□□□ -0.87
CTNND1-207ENST00000426142 RRS1Q15050 365 aaKnown RBP9.62□□□□□ -0.87
CTNND1-207ENST00000426142 TWISTNBQ3B726 338 aaPredicted RBP9.62□□□□□ -0.87
CTNND1-207ENST00000426142 ERBINQ96RT1 1412 aa9.62□□□□□ -0.87
CTNND1-207ENST00000426142 PCMTD1Q96MG8 357 aaPredicted RBP9.62□□□□□ -0.87
CTNND1-207ENST00000426142 PPP1R1BQ9UD71 204 aaPredicted RBP9.62□□□□□ -0.87
CTNND1-207ENST00000426142 SMC3Q9UQE7 1217 aa9.62□□□□□ -0.87
CTNND1-207ENST00000426142 KIAA1107Q9UPP5 1409 aa9.62□□□□□ -0.87
CTNND1-207ENST00000426142 FSD1Q9BTV5 496 aa9.62□□□□□ -0.87
CTNND1-207ENST00000426142 CDK13Q14004 1512 aaKnown RBP9.61□□□□□ -0.87
CTNND1-207ENST00000426142 TATP17735 454 aaPredicted RBP9.61□□□□□ -0.87
CTNND1-207ENST00000426142 TSR1Q2NL82 804 aaKnown RBP9.61□□□□□ -0.87
CTNND1-207ENST00000426142 CCAR2Q8N163 923 aaKnown RBP9.61□□□□□ -0.87
CTNND1-207ENST00000426142 CWC22Q9HCG8 908 aaKnown RBP9.61□□□□□ -0.87
CTNND1-207ENST00000426142 NOB1Q9ULX3 412 aaKnown RBP9.61□□□□□ -0.87
CTNND1-207ENST00000426142 RALYLQ86SE5 291 aaKnown RBP9.61□□□□□ -0.87
CTNND1-207ENST00000426142 C22orf23Q9BZE7 217 aa9.61□□□□□ -0.87
CTNND1-207ENST00000426142 TROQ12816 1431 aaPredicted RBP9.61□□□□□ -0.87
CTNND1-207ENST00000426142 EFCAB5A4FU69 1503 aa9.61□□□□□ -0.87
CTNND1-207ENST00000426142 TPM2P07951 284 aa9.61□□□□□ -0.87
CTNND1-207ENST00000426142 TOP2BQ02880 1626 aa9.61□□□□□ -0.87
CTNND1-207ENST00000426142 SLC4A2P04920 1241 aa9.6□□□□□ -0.87
CTNND1-207ENST00000426142 MYL6BP14649 208 aa9.6□□□□□ -0.87
CTNND1-207ENST00000426142 RTEL1-TNFRSF6BF6WH68 1400 aa9.6□□□□□ -0.87
CTNND1-207ENST00000426142 CABP4P57796 275 aa9.6□□□□□ -0.87
CTNND1-207ENST00000426142 BCAR3O75815 825 aa9.6□□□□□ -0.87
CTNND1-207ENST00000426142 SKOR2Q2VWA4 1001 aaPredicted RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms