RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 ATF3P18847 181 aa26.49■■□□□ 1.83
HDAC6-205ENST00000423941 TRAK1Q9UPV9 953 aa26.49■■□□□ 1.83
HDAC6-205ENST00000423941 GPRASP1Q5JY77 1395 aa26.47■■□□□ 1.83
HDAC6-205ENST00000423941 CDC42BPGQ6DT37 1551 aa26.47■■□□□ 1.83
HDAC6-205ENST00000423941 PIP4K2BP78356 416 aa26.47■■□□□ 1.83
HDAC6-205ENST00000423941 PRAM1Q96QH2 718 aa26.47■■□□□ 1.83
HDAC6-205ENST00000423941 MST1RQ04912 1400 aa26.46■■□□□ 1.83
HDAC6-205ENST00000423941 ROBO1Q9Y6N7 1651 aa26.44■■□□□ 1.82
HDAC6-205ENST00000423941 RALGAPBQ86X10 1494 aa26.42■■□□□ 1.82
HDAC6-205ENST00000423941 ADGRB2O60241 1585 aa26.41■■□□□ 1.82
HDAC6-205ENST00000423941 POGKQ9P215 609 aa26.41■■□□□ 1.82
HDAC6-205ENST00000423941 ROCK2O75116 1388 aaKnown RBP26.4■■□□□ 1.82
HDAC6-205ENST00000423941 FMN2Q9NZ56 1722 aa26.39■■□□□ 1.81
HDAC6-205ENST00000423941 C1orf167Q5SNV9 1468 aa26.38■■□□□ 1.81
HDAC6-205ENST00000423941 SCAF1Q9H7N4 1312 aaKnown RBP26.38■■□□□ 1.81
HDAC6-205ENST00000423941 SAFB2Q14151 953 aaKnown RBP eCLIP26.36■■□□□ 1.81
HDAC6-205ENST00000423941 BRINP3Q76B58 766 aa26.35■■□□□ 1.81
HDAC6-205ENST00000423941 HSPA1LP34931 641 aa26.34■■□□□ 1.81
HDAC6-205ENST00000423941 MINK1Q8N4C8 1332 aaPredicted RBP26.31■■□□□ 1.8
HDAC6-205ENST00000423941 AHDC1Q5TGY3 1603 aaPredicted RBP26.31■■□□□ 1.8
HDAC6-205ENST00000423941 CARD11Q9BXL7 1154 aa26.3■■□□□ 1.8
HDAC6-205ENST00000423941 CENPJQ9HC77 1338 aaPredicted RBP26.3■■□□□ 1.8
HDAC6-205ENST00000423941 RGPD8O14715 1765 aaPredicted RBP26.3■■□□□ 1.8
HDAC6-205ENST00000423941 NHSL1Q5SYE7 1610 aa26.29■■□□□ 1.8
HDAC6-205ENST00000423941 WASLO00401 505 aaPredicted RBP26.29■■□□□ 1.8
HDAC6-205ENST00000423941 USP32Q8NFA0 1604 aa26.28■■□□□ 1.8
HDAC6-205ENST00000423941 QRICH2Q9H0J4 1663 aa26.28■■□□□ 1.8
HDAC6-205ENST00000423941 ORAI2Q96SN7 254 aa26.28■■□□□ 1.8
HDAC6-205ENST00000423941 HIRIP3Q9BW71 556 aaPredicted RBP26.27■■□□□ 1.8
HDAC6-205ENST00000423941 ANKARQ7Z5J8 1434 aa26.27■■□□□ 1.8
HDAC6-205ENST00000423941 PHLPP1O60346 1717 aa26.26■■□□□ 1.79
HDAC6-205ENST00000423941 COL16A1Q07092 1604 aaPredicted RBP26.25■■□□□ 1.79
HDAC6-205ENST00000423941 EIF3AQ14152 1382 aaKnown RBP26.24■■□□□ 1.79
HDAC6-205ENST00000423941 TULP4Q9NRJ4 1543 aa26.24■■□□□ 1.79
HDAC6-205ENST00000423941 SBNO2Q9Y2G9 1366 aa26.23■■□□□ 1.79
HDAC6-205ENST00000423941 PRR36Q9H6K5 1346 aa26.22■■□□□ 1.79
HDAC6-205ENST00000423941 NUTM2FA1L443 756 aa26.22■■□□□ 1.79
HDAC6-205ENST00000423941 ESCO1Q5FWF5 840 aa26.21■■□□□ 1.79
HDAC6-205ENST00000423941 KIF1AQ12756 1690 aa26.2■■□□□ 1.78
HDAC6-205ENST00000423941 CDK19Q9BWU1 502 aa26.2■■□□□ 1.78
HDAC6-205ENST00000423941 SOS2Q07890 1332 aaPredicted RBP26.18■■□□□ 1.78
HDAC6-205ENST00000423941 ATP7BP35670 1465 aa26.17■■□□□ 1.78
HDAC6-205ENST00000423941 DDX17Q92841 729 aaKnown RBP26.16■■□□□ 1.78
HDAC6-205ENST00000423941 PHF8Q9UPP1 1060 aa26.15■■□□□ 1.78
HDAC6-205ENST00000423941 ITSN1Q15811 1721 aa26.14■■□□□ 1.78
HDAC6-205ENST00000423941 NUDT16Q96DE0 195 aaKnown RBP26.14■■□□□ 1.78
HDAC6-205ENST00000423941 TOPAZ1Q8N9V7 1692 aa26.14■■□□□ 1.78
HDAC6-205ENST00000423941 NPHP3Q7Z494 1330 aa26.14■■□□□ 1.77
HDAC6-205ENST00000423941 FOXO3O43524 673 aa26.13■■□□□ 1.77
HDAC6-205ENST00000423941 TESK2Q96S53 571 aa26.13■■□□□ 1.77
HDAC6-205ENST00000423941 PXDNQ92626 1479 aa26.12■■□□□ 1.77
HDAC6-205ENST00000423941 EVC2Q86UK5 1308 aa26.12■■□□□ 1.77
HDAC6-205ENST00000423941 USP47Q96K76 1375 aa26.11■■□□□ 1.77
HDAC6-205ENST00000423941 ST20-MTHFSA0A0A6YYL1 179 aa26.11■■□□□ 1.77
HDAC6-205ENST00000423941 CCDC61Q9Y6R9 512 aa26.11■■□□□ 1.77
HDAC6-205ENST00000423941 SHPRHQ149N8 1683 aa26.1■■□□□ 1.77
HDAC6-205ENST00000423941 LRRC59Q96AG4 307 aaKnown RBP26.1■■□□□ 1.77
HDAC6-205ENST00000423941 JCADQ9P266 1359 aa26.09■■□□□ 1.77
HDAC6-205ENST00000423941 PLEKHG3A1L390 1219 aa26.08■■□□□ 1.77
HDAC6-205ENST00000423941 CABP2Q9NPB3 220 aa26.08■■□□□ 1.77
HDAC6-205ENST00000423941 SLC24A1O60721 1099 aa26.07■■□□□ 1.76
HDAC6-205ENST00000423941 SRPK2P78362 688 aaKnown RBP26.06■■□□□ 1.76
HDAC6-205ENST00000423941 PMFBP1Q8TBY8 1022 aa26.06■■□□□ 1.76
HDAC6-205ENST00000423941 PUS7Q96PZ0 661 aaKnown RBP26.06■■□□□ 1.76
HDAC6-205ENST00000423941 POLR3AO14802 1390 aaPredicted RBP26.05■■□□□ 1.76
HDAC6-205ENST00000423941 KRT28Q7Z3Y7 464 aa26.04■■□□□ 1.76
HDAC6-205ENST00000423941 PNPLA6Q8IY17 1366 aa26.02■■□□□ 1.76
HDAC6-205ENST00000423941 TRPM3Q9HCF6 1732 aaPredicted RBP26.02■■□□□ 1.76
HDAC6-205ENST00000423941 SBNO1A3KN83 1393 aa26.01■■□□□ 1.75
HDAC6-205ENST00000423941 COL22A1Q8NFW1 1626 aaPredicted RBP26■■□□□ 1.75
HDAC6-205ENST00000423941 PPIP5K1Q6PFW1 1433 aa26■■□□□ 1.75
HDAC6-205ENST00000423941 SPATA31A6Q5VVP1 1343 aa26■■□□□ 1.75
HDAC6-205ENST00000423941 SPATA31A3Q5VYP0 1347 aa26■■□□□ 1.75
HDAC6-205ENST00000423941 XPCQ01831 940 aaPredicted RBP26■■□□□ 1.75
HDAC6-205ENST00000423941 ATAD2Q6PL18 1390 aa25.99■■□□□ 1.75
HDAC6-205ENST00000423941 PSME1Q06323 249 aa25.99■■□□□ 1.75
HDAC6-205ENST00000423941 ACEP12821 1306 aa25.98■■□□□ 1.75
HDAC6-205ENST00000423941 NGDNQ8NEJ9 315 aaKnown RBP25.97■■□□□ 1.75
HDAC6-205ENST00000423941 CABP1Q9NZU7 370 aa25.97■■□□□ 1.75
HDAC6-205ENST00000423941 MED1Q15648 1581 aaPredicted RBP25.96■■□□□ 1.75
HDAC6-205ENST00000423941 ALS2Q96Q42 1657 aa25.96■■□□□ 1.75
HDAC6-205ENST00000423941 EIF4G2P78344 907 aaKnown RBP eCLIP25.95■■□□□ 1.74
HDAC6-205ENST00000423941 TNS3Q68CZ2 1445 aa25.94■■□□□ 1.74
HDAC6-205ENST00000423941 DISP3Q9P2K9 1392 aa25.94■■□□□ 1.74
HDAC6-205ENST00000423941 AKAP12Q02952 1782 aa25.92■■□□□ 1.74
HDAC6-205ENST00000423941 CPSF1Q10570 1443 aaKnown RBP25.92■■□□□ 1.74
HDAC6-205ENST00000423941 HSPA5P11021 654 aaKnown RBP25.92■■□□□ 1.74
HDAC6-205ENST00000423941 TMF1P82094 1093 aa25.92■■□□□ 1.74
HDAC6-205ENST00000423941 BRD4O60885 1362 aaPredicted RBP25.92■■□□□ 1.74
HDAC6-205ENST00000423941 LRP6O75581 1613 aa25.92■■□□□ 1.74
HDAC6-205ENST00000423941 SSH2Q76I76 1423 aa25.9■■□□□ 1.74
HDAC6-205ENST00000423941 ZNF692Q9BU19 519 aaPredicted RBP25.89■■□□□ 1.74
HDAC6-205ENST00000423941 CD163L1Q9NR16 1453 aa25.88■■□□□ 1.73
HDAC6-205ENST00000423941 ARHGEF10O15013 1369 aa25.88■■□□□ 1.73
HDAC6-205ENST00000423941 USP6P35125 1406 aa25.88■■□□□ 1.73
HDAC6-205ENST00000423941 NINLQ9Y2I6 1382 aa25.86■■□□□ 1.73
HDAC6-205ENST00000423941 SLC12A5Q9H2X9 1139 aa25.86■■□□□ 1.73
HDAC6-205ENST00000423941 CDCA8Q53HL2 280 aa25.85■■□□□ 1.73
HDAC6-205ENST00000423941 MON2Q7Z3U7 1717 aa25.85■■□□□ 1.73
HDAC6-205ENST00000423941 CRYBG1Q9Y4K1 1723 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms