RNA–Protein interactions for RNA: ENST00000423723.1

NCDN-204, Transcript of neurochondrin, humanhuman

TSL 3

Gene NCDN, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-204ENST00000423723 PLEKHH1Q9ULM0 1364 aa16.84■□□□□ 0.29
NCDN-204ENST00000423723 DLC1Q96QB1 1528 aa16.84■□□□□ 0.29
NCDN-204ENST00000423723 PHLPP1O60346 1717 aa16.84■□□□□ 0.29
NCDN-204ENST00000423723 CDC42BPGQ6DT37 1551 aa16.83■□□□□ 0.28
NCDN-204ENST00000423723 RGS17Q9UGC6 210 aaPredicted RBP16.83■□□□□ 0.28
NCDN-204ENST00000423723 SOS2Q07890 1332 aaPredicted RBP16.82■□□□□ 0.28
NCDN-204ENST00000423723 SPATA31A6Q5VVP1 1343 aa16.82■□□□□ 0.28
NCDN-204ENST00000423723 ORAI2Q96SN7 254 aa16.82■□□□□ 0.28
NCDN-204ENST00000423723 KDM2AQ9Y2K7 1162 aa16.82■□□□□ 0.28
NCDN-204ENST00000423723 LRRC59Q96AG4 307 aaKnown RBP16.81■□□□□ 0.28
NCDN-204ENST00000423723 CCER1Q8TC90 406 aaPredicted RBP16.8■□□□□ 0.28
NCDN-204ENST00000423723 NHSL1Q5SYE7 1610 aa16.8■□□□□ 0.28
NCDN-204ENST00000423723 PRAM1Q96QH2 718 aa16.77■□□□□ 0.28
NCDN-204ENST00000423723 SHPRHQ149N8 1683 aa16.76■□□□□ 0.27
NCDN-204ENST00000423723 SOCS7O14512 581 aa16.76■□□□□ 0.27
NCDN-204ENST00000423723 DDX17Q92841 729 aaKnown RBP16.76■□□□□ 0.27
NCDN-204ENST00000423723 L3MBTL2Q969R5 705 aa16.75■□□□□ 0.27
NCDN-204ENST00000423723 SIN3AQ96ST3 1273 aa16.74■□□□□ 0.27
NCDN-204ENST00000423723 PHF23Q9BUL5 403 aaPredicted RBP16.74■□□□□ 0.27
NCDN-204ENST00000423723 TRAK1Q9UPV9 953 aa16.74■□□□□ 0.27
NCDN-204ENST00000423723 PNPLA6Q8IY17 1366 aa16.74■□□□□ 0.27
NCDN-204ENST00000423723 KIAA1210Q9ULL0 1709 aa16.73■□□□□ 0.27
NCDN-204ENST00000423723 NPHP3Q7Z494 1330 aa16.73■□□□□ 0.27
NCDN-204ENST00000423723 ESCO1Q5FWF5 840 aa16.73■□□□□ 0.27
NCDN-204ENST00000423723 LRP6O75581 1613 aa16.73■□□□□ 0.27
NCDN-204ENST00000423723 POGKQ9P215 609 aa16.72■□□□□ 0.27
NCDN-204ENST00000423723 FMN2Q9NZ56 1722 aa16.72■□□□□ 0.27
NCDN-204ENST00000423723 ADGRB2O60241 1585 aa16.72■□□□□ 0.27
NCDN-204ENST00000423723 NBPF1Q3BBV0 1214 aa16.71■□□□□ 0.27
NCDN-204ENST00000423723 ANKARQ7Z5J8 1434 aa16.7■□□□□ 0.26
NCDN-204ENST00000423723 PXDNQ92626 1479 aa16.7■□□□□ 0.26
NCDN-204ENST00000423723 FOXO3O43524 673 aa16.7■□□□□ 0.26
NCDN-204ENST00000423723 POTEAQ6S8J7 498 aa16.7■□□□□ 0.26
NCDN-204ENST00000423723 WASLO00401 505 aaPredicted RBP16.69■□□□□ 0.26
NCDN-204ENST00000423723 SAFB2Q14151 953 aaKnown RBP eCLIP16.67■□□□□ 0.26
NCDN-204ENST00000423723 PHF8Q9UPP1 1060 aa16.67■□□□□ 0.26
NCDN-204ENST00000423723 NUTM2FA1L443 756 aa16.66■□□□□ 0.26
NCDN-204ENST00000423723 EIF3AQ14152 1382 aaKnown RBP16.65■□□□□ 0.26
NCDN-204ENST00000423723 SPATA31A3Q5VYP0 1347 aa16.65■□□□□ 0.26
NCDN-204ENST00000423723 PRR36Q9H6K5 1346 aa16.65■□□□□ 0.26
NCDN-204ENST00000423723 ZNF772Q68DY9 489 aaPredicted RBP16.64■□□□□ 0.25
NCDN-204ENST00000423723 KRT28Q7Z3Y7 464 aa16.64■□□□□ 0.25
NCDN-204ENST00000423723 MINK1Q8N4C8 1332 aaPredicted RBP16.64■□□□□ 0.25
NCDN-204ENST00000423723 USP32Q8NFA0 1604 aa16.63■□□□□ 0.25
NCDN-204ENST00000423723 COL22A1Q8NFW1 1626 aaPredicted RBP16.63■□□□□ 0.25
NCDN-204ENST00000423723 KIF1AQ12756 1690 aa16.63■□□□□ 0.25
NCDN-204ENST00000423723 ARHGEF28Q8N1W1 1705 aaKnown RBP16.63■□□□□ 0.25
NCDN-204ENST00000423723 NEUROD1Q13562 356 aa16.63■□□□□ 0.25
NCDN-204ENST00000423723 SBNO1A3KN83 1393 aa16.63■□□□□ 0.25
NCDN-204ENST00000423723 TULP4Q9NRJ4 1543 aa16.62■□□□□ 0.25
NCDN-204ENST00000423723 HIRIP3Q9BW71 556 aaPredicted RBP16.62■□□□□ 0.25
NCDN-204ENST00000423723 GPRASP1Q5JY77 1395 aa16.62■□□□□ 0.25
NCDN-204ENST00000423723 NUTM2BA6NNL0 878 aaPredicted RBP16.61■□□□□ 0.25
NCDN-204ENST00000423723 NUTM2EB1AL46 878 aaPredicted RBP16.61■□□□□ 0.25
NCDN-204ENST00000423723 PSME1Q06323 249 aa16.61■□□□□ 0.25
NCDN-204ENST00000423723 NBPF8Q3BBV2 869 aa16.61■□□□□ 0.25
NCDN-204ENST00000423723 NUTM2AQ8IVF1 878 aaPredicted RBP16.61■□□□□ 0.25
NCDN-204ENST00000423723 FNBP4Q8N3X1 1017 aaPredicted RBP16.61■□□□□ 0.25
NCDN-204ENST00000423723 RGPD8O14715 1765 aaPredicted RBP16.6■□□□□ 0.25
NCDN-204ENST00000423723 XPCQ01831 940 aaPredicted RBP16.59■□□□□ 0.25
NCDN-204ENST00000423723 MEX3CQ5U5Q3 659 aaKnown RBP16.59■□□□□ 0.25
NCDN-204ENST00000423723 NUDT16Q96DE0 195 aaKnown RBP16.59■□□□□ 0.25
NCDN-204ENST00000423723 CDK19Q9BWU1 502 aa16.59■□□□□ 0.25
NCDN-204ENST00000423723 PLEKHG3A1L390 1219 aa16.58■□□□□ 0.24
NCDN-204ENST00000423723 CCDC61Q9Y6R9 512 aa16.58■□□□□ 0.24
NCDN-204ENST00000423723 CENPJQ9HC77 1338 aaPredicted RBP16.58■□□□□ 0.24
NCDN-204ENST00000423723 ATP7BP35670 1465 aa16.58■□□□□ 0.24
NCDN-204ENST00000423723 AFF2P51816 1311 aa16.57■□□□□ 0.24
NCDN-204ENST00000423723 PMFBP1Q8TBY8 1022 aa16.57■□□□□ 0.24
NCDN-204ENST00000423723 TRPM1Q7Z4N2 1603 aa16.56■□□□□ 0.24
NCDN-204ENST00000423723 TNS3Q68CZ2 1445 aa16.56■□□□□ 0.24
NCDN-204ENST00000423723 POLR3AO14802 1390 aaPredicted RBP16.56■□□□□ 0.24
NCDN-204ENST00000423723 ARHGEF10O15013 1369 aa16.54■□□□□ 0.24
NCDN-204ENST00000423723 NGLY1Q96IV0 654 aa16.54■□□□□ 0.24
NCDN-204ENST00000423723 C8orf37Q96NL8 207 aa16.54■□□□□ 0.24
NCDN-204ENST00000423723 CDK12Q9NYV4 1490 aaPredicted RBP16.54■□□□□ 0.24
NCDN-204ENST00000423723 ROCK2O75116 1388 aaKnown RBP16.53■□□□□ 0.24
NCDN-204ENST00000423723 CLSPNQ9HAW4 1339 aa16.53■□□□□ 0.24
NCDN-204ENST00000423723 ADAMTS2O95450 1211 aa16.53■□□□□ 0.24
NCDN-204ENST00000423723 RXRBP28702 533 aa16.52■□□□□ 0.24
NCDN-204ENST00000423723 QTRT2Q9H974 415 aaKnown RBP16.52■□□□□ 0.24
NCDN-204ENST00000423723 TONSLQ96HA7 1378 aa16.51■□□□□ 0.23
NCDN-204ENST00000423723 SBNO2Q9Y2G9 1366 aa16.51■□□□□ 0.23
NCDN-204ENST00000423723 BCL9LQ86UU0 1499 aa16.51■□□□□ 0.23
NCDN-204ENST00000423723 RBM6P78332 1123 aaKnown RBP16.51■□□□□ 0.23
NCDN-204ENST00000423723 TIMELESSQ9UNS1 1208 aa16.51■□□□□ 0.23
NCDN-204ENST00000423723 TRPM3Q9HCF6 1732 aaPredicted RBP16.5■□□□□ 0.23
NCDN-204ENST00000423723 NGDNQ8NEJ9 315 aaKnown RBP16.5■□□□□ 0.23
NCDN-204ENST00000423723 RALGAPBQ86X10 1494 aa16.49■□□□□ 0.23
NCDN-204ENST00000423723 USP21Q9UK80 565 aa16.49■□□□□ 0.23
NCDN-204ENST00000423723 TRPC5Q9UL62 973 aaPredicted RBP16.49■□□□□ 0.23
NCDN-204ENST00000423723 SLIT2O94813 1529 aa16.49■□□□□ 0.23
NCDN-204ENST00000423723 BRD4O60885 1362 aaPredicted RBP16.49■□□□□ 0.23
NCDN-204ENST00000423723 ACEP12821 1306 aa16.48■□□□□ 0.23
NCDN-204ENST00000423723 ATRNO75882 1429 aa16.48■□□□□ 0.23
NCDN-204ENST00000423723 ALS2Q96Q42 1657 aa16.48■□□□□ 0.23
NCDN-204ENST00000423723 EVC2Q86UK5 1308 aa16.47■□□□□ 0.23
NCDN-204ENST00000423723 TOPAZ1Q8N9V7 1692 aa16.47■□□□□ 0.23
NCDN-204ENST00000423723 CABP2Q9NPB3 220 aa16.47■□□□□ 0.23
NCDN-204ENST00000423723 ITSN1Q15811 1721 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms