RNA–Protein interactions for RNA: ENST00000422266.1

MDC1-204, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-204ENST00000422266 ZNF772Q68DY9 489 aaPredicted RBP12.57□□□□□ -0.4
MDC1-204ENST00000422266 DCAF11Q8TEB1 546 aa12.57□□□□□ -0.4
MDC1-204ENST00000422266 KNDC1Q76NI1 1749 aa12.57□□□□□ -0.4
MDC1-204ENST00000422266 CFAP70Q5T0N1 1121 aa12.56□□□□□ -0.4
MDC1-204ENST00000422266 SHPRHQ149N8 1683 aa12.56□□□□□ -0.4
MDC1-204ENST00000422266 NHSL1Q5SYE7 1610 aa12.55□□□□□ -0.4
MDC1-204ENST00000422266 ESCO1Q5FWF5 840 aa12.55□□□□□ -0.4
MDC1-204ENST00000422266 WAPLQ7Z5K2 1190 aa12.55□□□□□ -0.4
MDC1-204ENST00000422266 POGKQ9P215 609 aa12.55□□□□□ -0.4
MDC1-204ENST00000422266 KDM2AQ9Y2K7 1162 aa12.54□□□□□ -0.4
MDC1-204ENST00000422266 SOS2Q07890 1332 aaPredicted RBP12.54□□□□□ -0.4
MDC1-204ENST00000422266 EIF3AQ14152 1382 aaKnown RBP12.54□□□□□ -0.4
MDC1-204ENST00000422266 DLC1Q96QB1 1528 aa12.53□□□□□ -0.4
MDC1-204ENST00000422266 ORAI2Q96SN7 254 aa12.53□□□□□ -0.4
MDC1-204ENST00000422266 RGS17Q9UGC6 210 aaPredicted RBP12.53□□□□□ -0.4
MDC1-204ENST00000422266 PRAM1Q96QH2 718 aa12.52□□□□□ -0.41
MDC1-204ENST00000422266 NUTM2BA6NNL0 878 aaPredicted RBP12.51□□□□□ -0.41
MDC1-204ENST00000422266 NUTM2EB1AL46 878 aaPredicted RBP12.51□□□□□ -0.41
MDC1-204ENST00000422266 NUTM2AQ8IVF1 878 aaPredicted RBP12.51□□□□□ -0.41
MDC1-204ENST00000422266 PNPLA6Q8IY17 1366 aa12.51□□□□□ -0.41
MDC1-204ENST00000422266 PSME1Q06323 249 aa12.5□□□□□ -0.41
MDC1-204ENST00000422266 PLEKHH1Q9ULM0 1364 aa12.5□□□□□ -0.41
MDC1-204ENST00000422266 FOXO3O43524 673 aa12.49□□□□□ -0.41
MDC1-204ENST00000422266 POTEAQ6S8J7 498 aa12.49□□□□□ -0.41
MDC1-204ENST00000422266 DDX17Q92841 729 aaKnown RBP12.49□□□□□ -0.41
MDC1-204ENST00000422266 TRAK1Q9UPV9 953 aa12.49□□□□□ -0.41
MDC1-204ENST00000422266 LRP6O75581 1613 aa12.48□□□□□ -0.41
MDC1-204ENST00000422266 ANKARQ7Z5J8 1434 aa12.48□□□□□ -0.41
MDC1-204ENST00000422266 KIF1AQ12756 1690 aa12.48□□□□□ -0.41
MDC1-204ENST00000422266 ADGRB1O14514 1584 aa12.47□□□□□ -0.41
MDC1-204ENST00000422266 NUTM2FA1L443 756 aa12.47□□□□□ -0.41
MDC1-204ENST00000422266 PHF8Q9UPP1 1060 aa12.47□□□□□ -0.41
MDC1-204ENST00000422266 FMN2Q9NZ56 1722 aa12.46□□□□□ -0.41
MDC1-204ENST00000422266 RXRBP28702 533 aa12.46□□□□□ -0.41
MDC1-204ENST00000422266 SAFB2Q14151 953 aaKnown RBP eCLIP12.46□□□□□ -0.41
MDC1-204ENST00000422266 C8orf37Q96NL8 207 aa12.46□□□□□ -0.41
MDC1-204ENST00000422266 AFF2P51816 1311 aa12.45□□□□□ -0.42
MDC1-204ENST00000422266 ADGRB2O60241 1585 aa12.45□□□□□ -0.42
MDC1-204ENST00000422266 NGLY1Q96IV0 654 aa12.45□□□□□ -0.42
MDC1-204ENST00000422266 WASLO00401 505 aaPredicted RBP12.44□□□□□ -0.42
MDC1-204ENST00000422266 KRT28Q7Z3Y7 464 aa12.44□□□□□ -0.42
MDC1-204ENST00000422266 PXDNQ92626 1479 aa12.44□□□□□ -0.42
MDC1-204ENST00000422266 ARHGEF10O15013 1369 aa12.43□□□□□ -0.42
MDC1-204ENST00000422266 SPATA31A3Q5VYP0 1347 aa12.43□□□□□ -0.42
MDC1-204ENST00000422266 KIAA1210Q9ULL0 1709 aa12.43□□□□□ -0.42
MDC1-204ENST00000422266 CDK12Q9NYV4 1490 aaPredicted RBP12.43□□□□□ -0.42
MDC1-204ENST00000422266 ADAMTS2O95450 1211 aa12.43□□□□□ -0.42
MDC1-204ENST00000422266 SBNO1A3KN83 1393 aa12.43□□□□□ -0.42
MDC1-204ENST00000422266 GPRASP1Q5JY77 1395 aa12.43□□□□□ -0.42
MDC1-204ENST00000422266 MINK1Q8N4C8 1332 aaPredicted RBP12.42□□□□□ -0.42
MDC1-204ENST00000422266 COL22A1Q8NFW1 1626 aaPredicted RBP12.42□□□□□ -0.42
MDC1-204ENST00000422266 RBM6P78332 1123 aaKnown RBP12.42□□□□□ -0.42
MDC1-204ENST00000422266 TRIM26Q12899 539 aaPredicted RBP12.42□□□□□ -0.42
MDC1-204ENST00000422266 FNBP4Q8N3X1 1017 aaPredicted RBP12.42□□□□□ -0.42
MDC1-204ENST00000422266 QTRT2Q9H974 415 aaKnown RBP12.42□□□□□ -0.42
MDC1-204ENST00000422266 HAP1P54257 671 aaPredicted RBP12.41□□□□□ -0.42
MDC1-204ENST00000422266 XPCQ01831 940 aaPredicted RBP12.41□□□□□ -0.42
MDC1-204ENST00000422266 USP21Q9UK80 565 aa12.41□□□□□ -0.42
MDC1-204ENST00000422266 TRPC5Q9UL62 973 aaPredicted RBP12.41□□□□□ -0.42
MDC1-204ENST00000422266 TULP4Q9NRJ4 1543 aa12.41□□□□□ -0.42
MDC1-204ENST00000422266 TNS3Q68CZ2 1445 aa12.4□□□□□ -0.42
MDC1-204ENST00000422266 HIRIP3Q9BW71 556 aaPredicted RBP12.4□□□□□ -0.42
MDC1-204ENST00000422266 NGDNQ8NEJ9 315 aaKnown RBP12.39□□□□□ -0.43
MDC1-204ENST00000422266 L3MBTL2Q969R5 705 aa12.39□□□□□ -0.43
MDC1-204ENST00000422266 NEUROD1Q13562 356 aa12.38□□□□□ -0.43
MDC1-204ENST00000422266 PMFBP1Q8TBY8 1022 aa12.38□□□□□ -0.43
MDC1-204ENST00000422266 CCDC61Q9Y6R9 512 aa12.38□□□□□ -0.43
MDC1-204ENST00000422266 LMOD2Q6P5Q4 547 aa12.37□□□□□ -0.43
MDC1-204ENST00000422266 ARHGEF28Q8N1W1 1705 aaKnown RBP12.37□□□□□ -0.43
MDC1-204ENST00000422266 CENPJQ9HC77 1338 aaPredicted RBP12.37□□□□□ -0.43
MDC1-204ENST00000422266 NBPF1Q3BBV0 1214 aa12.36□□□□□ -0.43
MDC1-204ENST00000422266 NUDT16Q96DE0 195 aaKnown RBP12.36□□□□□ -0.43
MDC1-204ENST00000422266 CDK19Q9BWU1 502 aa12.36□□□□□ -0.43
MDC1-204ENST00000422266 SIN3AQ96ST3 1273 aa12.35□□□□□ -0.43
MDC1-204ENST00000422266 RGPD8O14715 1765 aaPredicted RBP12.35□□□□□ -0.43
MDC1-204ENST00000422266 ITSN1Q15811 1721 aa12.34□□□□□ -0.43
MDC1-204ENST00000422266 ROCK2O75116 1388 aaKnown RBP12.34□□□□□ -0.43
MDC1-204ENST00000422266 SRPK2P78362 688 aaKnown RBP12.34□□□□□ -0.43
MDC1-204ENST00000422266 UNC5CLQ8IV45 518 aa12.34□□□□□ -0.43
MDC1-204ENST00000422266 PRR36Q9H6K5 1346 aa12.34□□□□□ -0.43
MDC1-204ENST00000422266 USP32Q8NFA0 1604 aa12.33□□□□□ -0.43
MDC1-204ENST00000422266 BRD4O60885 1362 aaPredicted RBP12.33□□□□□ -0.44
MDC1-204ENST00000422266 TONSLQ96HA7 1378 aa12.33□□□□□ -0.44
MDC1-204ENST00000422266 PLEKHG3A1L390 1219 aa12.33□□□□□ -0.44
MDC1-204ENST00000422266 PAK3O75914 559 aaPredicted RBP12.33□□□□□ -0.44
MDC1-204ENST00000422266 EVC2Q86UK5 1308 aa12.33□□□□□ -0.44
MDC1-204ENST00000422266 ATP7BP35670 1465 aa12.33□□□□□ -0.44
MDC1-204ENST00000422266 ATRNO75882 1429 aa12.32□□□□□ -0.44
MDC1-204ENST00000422266 SLC24A1O60721 1099 aa12.32□□□□□ -0.44
MDC1-204ENST00000422266 POLR3AO14802 1390 aaPredicted RBP12.31□□□□□ -0.44
MDC1-204ENST00000422266 MARF1Q9Y4F3 1742 aaKnown RBP12.31□□□□□ -0.44
MDC1-204ENST00000422266 GJD4Q96KN9 370 aaPredicted RBP12.31□□□□□ -0.44
MDC1-204ENST00000422266 BCL9LQ86UU0 1499 aa12.31□□□□□ -0.44
MDC1-204ENST00000422266 SLIT2O94813 1529 aa12.31□□□□□ -0.44
MDC1-204ENST00000422266 NBPF8Q3BBV2 869 aa12.3□□□□□ -0.44
MDC1-204ENST00000422266 ACEP12821 1306 aa12.3□□□□□ -0.44
MDC1-204ENST00000422266 ATAD2Q6PL18 1390 aa12.3□□□□□ -0.44
MDC1-204ENST00000422266 RGS12O14924 1447 aa12.29□□□□□ -0.44
MDC1-204ENST00000422266 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.29□□□□□ -0.44
MDC1-204ENST00000422266 UPF1Q92900 1129 aaKnown RBP eCLIP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms