RNA–Protein interactions for RNA: ENST00000422080.5

HDLBP-208, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-208ENST00000422080 CFAP70Q5T0N1 1121 aa26.08■■□□□ 1.77
HDLBP-208ENST00000422080 LRP6O75581 1613 aa26.07■■□□□ 1.76
HDLBP-208ENST00000422080 NHSL1Q5SYE7 1610 aa26.06■■□□□ 1.76
HDLBP-208ENST00000422080 DHX57Q6P158 1386 aaKnown RBP26.06■■□□□ 1.76
HDLBP-208ENST00000422080 SHPRHQ149N8 1683 aa26.06■■□□□ 1.76
HDLBP-208ENST00000422080 STAC3Q96MF2 364 aa26.05■■□□□ 1.76
HDLBP-208ENST00000422080 SOS2Q07890 1332 aaPredicted RBP26.05■■□□□ 1.76
HDLBP-208ENST00000422080 NUTM2BA6NNL0 878 aaPredicted RBP26.04■■□□□ 1.76
HDLBP-208ENST00000422080 NUTM2EB1AL46 878 aaPredicted RBP26.04■■□□□ 1.76
HDLBP-208ENST00000422080 NUTM2AQ8IVF1 878 aaPredicted RBP26.04■■□□□ 1.76
HDLBP-208ENST00000422080 PLEKHH1Q9ULM0 1364 aa26.04■■□□□ 1.76
HDLBP-208ENST00000422080 ZNF772Q68DY9 489 aaPredicted RBP26.03■■□□□ 1.76
HDLBP-208ENST00000422080 ESCO1Q5FWF5 840 aa26.02■■□□□ 1.76
HDLBP-208ENST00000422080 CDC42BPGQ6DT37 1551 aa26.01■■□□□ 1.75
HDLBP-208ENST00000422080 PNPLA6Q8IY17 1366 aa26.01■■□□□ 1.75
HDLBP-208ENST00000422080 DCAF11Q8TEB1 546 aa25.99■■□□□ 1.75
HDLBP-208ENST00000422080 NPHP3Q7Z494 1330 aa25.98■■□□□ 1.75
HDLBP-208ENST00000422080 KDM2AQ9Y2K7 1162 aa25.98■■□□□ 1.75
HDLBP-208ENST00000422080 LAMC1P11047 1609 aa25.98■■□□□ 1.75
HDLBP-208ENST00000422080 KNDC1Q76NI1 1749 aa25.97■■□□□ 1.75
HDLBP-208ENST00000422080 NUTM2FA1L443 756 aa25.95■■□□□ 1.74
HDLBP-208ENST00000422080 PRAM1Q96QH2 718 aa25.95■■□□□ 1.74
HDLBP-208ENST00000422080 FOXO3O43524 673 aa25.94■■□□□ 1.74
HDLBP-208ENST00000422080 POGKQ9P215 609 aa25.92■■□□□ 1.74
HDLBP-208ENST00000422080 AFF2P51816 1311 aa25.9■■□□□ 1.74
HDLBP-208ENST00000422080 DLC1Q96QB1 1528 aa25.89■■□□□ 1.74
HDLBP-208ENST00000422080 C8orf37Q96NL8 207 aa25.89■■□□□ 1.74
HDLBP-208ENST00000422080 ADGRB1O14514 1584 aa25.88■■□□□ 1.73
HDLBP-208ENST00000422080 SAFB2Q14151 953 aaKnown RBP eCLIP25.88■■□□□ 1.73
HDLBP-208ENST00000422080 TRAK1Q9UPV9 953 aa25.88■■□□□ 1.73
HDLBP-208ENST00000422080 ADAMTS2O95450 1211 aa25.87■■□□□ 1.73
HDLBP-208ENST00000422080 RXRBP28702 533 aa25.87■■□□□ 1.73
HDLBP-208ENST00000422080 PXDNQ92626 1479 aa25.86■■□□□ 1.73
HDLBP-208ENST00000422080 XPCQ01831 940 aaPredicted RBP25.85■■□□□ 1.73
HDLBP-208ENST00000422080 NGLY1Q96IV0 654 aa25.85■■□□□ 1.73
HDLBP-208ENST00000422080 PHF8Q9UPP1 1060 aa25.84■■□□□ 1.73
HDLBP-208ENST00000422080 KRT28Q7Z3Y7 464 aa25.82■■□□□ 1.72
HDLBP-208ENST00000422080 QTRT2Q9H974 415 aaKnown RBP25.82■■□□□ 1.72
HDLBP-208ENST00000422080 FMN2Q9NZ56 1722 aa25.82■■□□□ 1.72
HDLBP-208ENST00000422080 SPATA31A3Q5VYP0 1347 aa25.8■■□□□ 1.72
HDLBP-208ENST00000422080 PSME1Q06323 249 aa25.79■■□□□ 1.72
HDLBP-208ENST00000422080 FNBP4Q8N3X1 1017 aaPredicted RBP25.79■■□□□ 1.72
HDLBP-208ENST00000422080 RBM6P78332 1123 aaKnown RBP25.78■■□□□ 1.72
HDLBP-208ENST00000422080 ANKARQ7Z5J8 1434 aa25.78■■□□□ 1.72
HDLBP-208ENST00000422080 HIRIP3Q9BW71 556 aaPredicted RBP25.77■■□□□ 1.72
HDLBP-208ENST00000422080 COL22A1Q8NFW1 1626 aaPredicted RBP25.77■■□□□ 1.72
HDLBP-208ENST00000422080 USP21Q9UK80 565 aa25.76■■□□□ 1.71
HDLBP-208ENST00000422080 MINK1Q8N4C8 1332 aaPredicted RBP25.76■■□□□ 1.71
HDLBP-208ENST00000422080 CDK12Q9NYV4 1490 aaPredicted RBP25.76■■□□□ 1.71
HDLBP-208ENST00000422080 KIF1AQ12756 1690 aa25.75■■□□□ 1.71
HDLBP-208ENST00000422080 WASLO00401 505 aaPredicted RBP25.75■■□□□ 1.71
HDLBP-208ENST00000422080 EIF3AQ14152 1382 aaKnown RBP25.74■■□□□ 1.71
HDLBP-208ENST00000422080 ADGRB2O60241 1585 aa25.73■■□□□ 1.71
HDLBP-208ENST00000422080 SBNO1A3KN83 1393 aa25.72■■□□□ 1.71
HDLBP-208ENST00000422080 TRPC5Q9UL62 973 aaPredicted RBP25.72■■□□□ 1.71
HDLBP-208ENST00000422080 PMFBP1Q8TBY8 1022 aa25.71■■□□□ 1.71
HDLBP-208ENST00000422080 PRR36Q9H6K5 1346 aa25.69■■□□□ 1.7
HDLBP-208ENST00000422080 TNS3Q68CZ2 1445 aa25.69■■□□□ 1.7
HDLBP-208ENST00000422080 NBPF1Q3BBV0 1214 aa25.67■■□□□ 1.7
HDLBP-208ENST00000422080 UPF1Q92900 1129 aaKnown RBP eCLIP25.66■■□□□ 1.7
HDLBP-208ENST00000422080 L3MBTL2Q969R5 705 aa25.66■■□□□ 1.7
HDLBP-208ENST00000422080 TULP4Q9NRJ4 1543 aa25.65■■□□□ 1.7
HDLBP-208ENST00000422080 ARHGEF10O15013 1369 aa25.65■■□□□ 1.7
HDLBP-208ENST00000422080 ATRNO75882 1429 aa25.64■■□□□ 1.7
HDLBP-208ENST00000422080 USP32Q8NFA0 1604 aa25.64■■□□□ 1.7
HDLBP-208ENST00000422080 GPRASP1Q5JY77 1395 aa25.64■■□□□ 1.69
HDLBP-208ENST00000422080 BCL9LQ86UU0 1499 aa25.64■■□□□ 1.69
HDLBP-208ENST00000422080 LMOD2Q6P5Q4 547 aa25.63■■□□□ 1.69
HDLBP-208ENST00000422080 NUDT16Q96DE0 195 aaKnown RBP25.63■■□□□ 1.69
HDLBP-208ENST00000422080 SIN3AQ96ST3 1273 aa25.63■■□□□ 1.69
HDLBP-208ENST00000422080 RGS12O14924 1447 aa25.63■■□□□ 1.69
HDLBP-208ENST00000422080 RGPD8O14715 1765 aaPredicted RBP25.62■■□□□ 1.69
HDLBP-208ENST00000422080 HAP1P54257 671 aaPredicted RBP25.62■■□□□ 1.69
HDLBP-208ENST00000422080 NGDNQ8NEJ9 315 aaKnown RBP25.62■■□□□ 1.69
HDLBP-208ENST00000422080 CDK19Q9BWU1 502 aa25.62■■□□□ 1.69
HDLBP-208ENST00000422080 KIAA1210Q9ULL0 1709 aa25.61■■□□□ 1.69
HDLBP-208ENST00000422080 CABLES1Q8TDN4 633 aa25.61■■□□□ 1.69
HDLBP-208ENST00000422080 UNC5CLQ8IV45 518 aa25.6■■□□□ 1.69
HDLBP-208ENST00000422080 NEUROD1Q13562 356 aa25.58■■□□□ 1.69
HDLBP-208ENST00000422080 ARHGEF28Q8N1W1 1705 aaKnown RBP25.57■■□□□ 1.68
HDLBP-208ENST00000422080 GJD4Q96KN9 370 aaPredicted RBP25.57■■□□□ 1.68
HDLBP-208ENST00000422080 SLIT2O94813 1529 aa25.57■■□□□ 1.68
HDLBP-208ENST00000422080 CCDC61Q9Y6R9 512 aa25.56■■□□□ 1.68
HDLBP-208ENST00000422080 ATP7BP35670 1465 aa25.55■■□□□ 1.68
HDLBP-208ENST00000422080 CENPJQ9HC77 1338 aaPredicted RBP25.55■■□□□ 1.68
HDLBP-208ENST00000422080 PLEKHG5O94827 1062 aa25.54■■□□□ 1.68
HDLBP-208ENST00000422080 PLEKHG3A1L390 1219 aa25.52■■□□□ 1.68
HDLBP-208ENST00000422080 MARF1Q9Y4F3 1742 aaKnown RBP25.51■■□□□ 1.68
HDLBP-208ENST00000422080 PAK3O75914 559 aaPredicted RBP25.51■■□□□ 1.67
HDLBP-208ENST00000422080 FAM83GA6ND36 823 aa25.5■■□□□ 1.67
HDLBP-208ENST00000422080 POLR3AO14802 1390 aaPredicted RBP25.49■■□□□ 1.67
HDLBP-208ENST00000422080 VPS72Q15906 364 aa25.49■■□□□ 1.67
HDLBP-208ENST00000422080 NBPF8Q3BBV2 869 aa25.49■■□□□ 1.67
HDLBP-208ENST00000422080 ATAD2Q6PL18 1390 aa25.48■■□□□ 1.67
HDLBP-208ENST00000422080 ACEP12821 1306 aa25.48■■□□□ 1.67
HDLBP-208ENST00000422080 TRPM3Q9HCF6 1732 aaPredicted RBP25.48■■□□□ 1.67
HDLBP-208ENST00000422080 SRPK2P78362 688 aaKnown RBP25.47■■□□□ 1.67
HDLBP-208ENST00000422080 TRIM26Q12899 539 aaPredicted RBP25.46■■□□□ 1.67
HDLBP-208ENST00000422080 RALGAPBQ86X10 1494 aa25.46■■□□□ 1.67
HDLBP-208ENST00000422080 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 129.7 ms