RNA–Protein interactions for RNA: ENST00000421851.1

RC3H1-IT1-201, RC3H1 intronic transcript 1, humanhuman

TSL 5 BASIC

Gene RC3H1-IT1, Length 448 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-IT1-201ENST00000421851 GJD4Q96KN9 370 aaPredicted RBP10.77□□□□□ -0.69
RC3H1-IT1-201ENST00000421851 ZSWIM6Q9HCJ5 1215 aa10.77□□□□□ -0.69
RC3H1-IT1-201ENST00000421851 MTMR7Q9Y216 660 aa10.77□□□□□ -0.69
RC3H1-IT1-201ENST00000421851 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.76□□□□□ -0.69
RC3H1-IT1-201ENST00000421851 GCGRP47871 477 aa10.76□□□□□ -0.69
RC3H1-IT1-201ENST00000421851 CTDSPL2Q05D32 466 aa10.76□□□□□ -0.69
RC3H1-IT1-201ENST00000421851 GPR153Q6NV75 609 aa10.76□□□□□ -0.69
RC3H1-IT1-201ENST00000421851 HOXA2O43364 376 aa10.75□□□□□ -0.69
RC3H1-IT1-201ENST00000421851 VAC14Q08AM6 782 aa10.75□□□□□ -0.69
RC3H1-IT1-201ENST00000421851 RGS22Q8NE09 1264 aa10.75□□□□□ -0.69
RC3H1-IT1-201ENST00000421851 HOXB3P14651 431 aaPredicted RBP10.74□□□□□ -0.69
RC3H1-IT1-201ENST00000421851 HELBQ8NG08 1087 aaPredicted RBP10.74□□□□□ -0.69
RC3H1-IT1-201ENST00000421851 ADAMTS19Q8TE59 1207 aa10.74□□□□□ -0.69
RC3H1-IT1-201ENST00000421851 HMX1Q9NP08 348 aaPredicted RBP10.73□□□□□ -0.69
RC3H1-IT1-201ENST00000421851 GUCA2AQ02747 115 aa10.72□□□□□ -0.69
RC3H1-IT1-201ENST00000421851 CFAP70Q5T0N1 1121 aa10.72□□□□□ -0.69
RC3H1-IT1-201ENST00000421851 PPP1R12CQ9BZL4 782 aa10.72□□□□□ -0.69
RC3H1-IT1-201ENST00000421851 BRD1O95696 1058 aa10.71□□□□□ -0.69
RC3H1-IT1-201ENST00000421851 KCNA1Q09470 495 aa10.71□□□□□ -0.69
RC3H1-IT1-201ENST00000421851 MTMR2Q13614 643 aa10.71□□□□□ -0.69
RC3H1-IT1-201ENST00000421851 PCDHGC3Q9UN70 934 aa10.71□□□□□ -0.69
RC3H1-IT1-201ENST00000421851 USTQ9Y2C2 406 aa10.71□□□□□ -0.69
RC3H1-IT1-201ENST00000421851 LMOD1P29536 600 aaPredicted RBP10.7□□□□□ -0.7
RC3H1-IT1-201ENST00000421851 PROX2Q3B8N5 592 aa10.7□□□□□ -0.7
RC3H1-IT1-201ENST00000421851 LRRN4Q8WUT4 740 aa10.7□□□□□ -0.7
RC3H1-IT1-201ENST00000421851 C6orf229H3BNL8 230 aa10.69□□□□□ -0.7
RC3H1-IT1-201ENST00000421851 FOXD4L5Q5VV16 416 aaPredicted RBP10.69□□□□□ -0.7
RC3H1-IT1-201ENST00000421851 FOXD4L4Q8WXT5 416 aaPredicted RBP10.69□□□□□ -0.7
RC3H1-IT1-201ENST00000421851 HLA-CQ95604 372 aa10.69□□□□□ -0.7
RC3H1-IT1-201ENST00000421851 TRIM34Q9BYJ4 488 aa10.69□□□□□ -0.7
RC3H1-IT1-201ENST00000421851 HDGFP51858 240 aaKnown RBP10.68□□□□□ -0.7
RC3H1-IT1-201ENST00000421851 PALM3A6NDB9 673 aaPredicted RBP10.67□□□□□ -0.7
RC3H1-IT1-201ENST00000421851 RBM25P49756 843 aaKnown RBP10.67□□□□□ -0.7
RC3H1-IT1-201ENST00000421851 CDCA8Q53HL2 280 aa10.67□□□□□ -0.7
RC3H1-IT1-201ENST00000421851 KCNH8Q96L42 1107 aa10.67□□□□□ -0.7
RC3H1-IT1-201ENST00000421851 ALG2Q9H553 416 aa10.67□□□□□ -0.7
RC3H1-IT1-201ENST00000421851 KIAA1468Q9P260 1216 aa10.67□□□□□ -0.7
RC3H1-IT1-201ENST00000421851 TFIP11Q9UBB9 837 aaKnown RBP10.67□□□□□ -0.7
RC3H1-IT1-201ENST00000421851 SLC10A3P09131 477 aa10.66□□□□□ -0.7
RC3H1-IT1-201ENST00000421851 SEMA3FQ13275 785 aa10.66□□□□□ -0.7
RC3H1-IT1-201ENST00000421851 GRIPAP1Q4V328 841 aa10.66□□□□□ -0.7
RC3H1-IT1-201ENST00000421851 SWT1Q5T5J6 900 aaKnown RBP10.66□□□□□ -0.7
RC3H1-IT1-201ENST00000421851 KCNK17Q96T54 332 aa10.66□□□□□ -0.7
RC3H1-IT1-201ENST00000421851 MYT1LQ9UL68 1186 aa10.66□□□□□ -0.7
RC3H1-IT1-201ENST00000421851 CARNS1A5YM72 827 aa10.65□□□□□ -0.7
RC3H1-IT1-201ENST00000421851 SLC4A3P48751 1232 aa10.65□□□□□ -0.7
RC3H1-IT1-201ENST00000421851 SRPK2P78362 688 aaKnown RBP10.65□□□□□ -0.7
RC3H1-IT1-201ENST00000421851 CFAP99D6REC4 459 aa10.64□□□□□ -0.71
RC3H1-IT1-201ENST00000421851 PNMA1Q8ND90 353 aa10.64□□□□□ -0.71
RC3H1-IT1-201ENST00000421851 SOX11P35716 441 aa10.63□□□□□ -0.71
RC3H1-IT1-201ENST00000421851 EPS8L1Q8TE68 723 aa10.63□□□□□ -0.71
RC3H1-IT1-201ENST00000421851 PRR7Q8TB68 274 aa10.62□□□□□ -0.71
RC3H1-IT1-201ENST00000421851 VRTNQ9H8Y1 702 aa10.62□□□□□ -0.71
RC3H1-IT1-201ENST00000421851 GPR37L1O60883 481 aa10.61□□□□□ -0.71
RC3H1-IT1-201ENST00000421851 SLF2Q8IX21 1173 aa10.61□□□□□ -0.71
RC3H1-IT1-201ENST00000421851 NR6A1Q15406 480 aa10.6□□□□□ -0.71
RC3H1-IT1-201ENST00000421851 FUT2Q10981 343 aa10.59□□□□□ -0.71
RC3H1-IT1-201ENST00000421851 SYMPKQ92797 1274 aaKnown RBP10.59□□□□□ -0.71
RC3H1-IT1-201ENST00000421851 ZNF428Q96B54 188 aa10.59□□□□□ -0.71
RC3H1-IT1-201ENST00000421851 IVNS1ABPQ9Y6Y0 642 aa10.59□□□□□ -0.71
RC3H1-IT1-201ENST00000421851 UCN2Q96RP3 112 aa10.58□□□□□ -0.72
RC3H1-IT1-201ENST00000421851 SEPT9Q9UHD8 586 aaPredicted RBP10.58□□□□□ -0.72
RC3H1-IT1-201ENST00000421851 ATG7O95352 703 aa10.57□□□□□ -0.72
RC3H1-IT1-201ENST00000421851 EIF4G2P78344 907 aaKnown RBP eCLIP10.57□□□□□ -0.72
RC3H1-IT1-201ENST00000421851 ZBED2Q9BTP6 218 aa10.57□□□□□ -0.72
RC3H1-IT1-201ENST00000421851 ATP6V1AP38606 617 aa10.56□□□□□ -0.72
RC3H1-IT1-201ENST00000421851 CCDC27Q2M243 656 aa10.56□□□□□ -0.72
RC3H1-IT1-201ENST00000421851 MAFBQ9Y5Q3 323 aaPredicted RBP10.56□□□□□ -0.72
RC3H1-IT1-201ENST00000421851 RNF40O75150 1001 aa10.55□□□□□ -0.72
RC3H1-IT1-201ENST00000421851 CFHP08603 1231 aa10.55□□□□□ -0.72
RC3H1-IT1-201ENST00000421851 TBC1D9Q6ZT07 1266 aa10.55□□□□□ -0.72
RC3H1-IT1-201ENST00000421851 E9PSI1 815 aa10.54□□□□□ -0.72
RC3H1-IT1-201ENST00000421851 RABGEF1Q9UJ41 708 aa10.54□□□□□ -0.72
RC3H1-IT1-201ENST00000421851 NISCHQ9Y2I1 1504 aa10.53□□□□□ -0.72
RC3H1-IT1-201ENST00000421851 ATP9BO43861 1147 aa10.53□□□□□ -0.72
RC3H1-IT1-201ENST00000421851 HOXB1P14653 301 aaPredicted RBP10.53□□□□□ -0.72
RC3H1-IT1-201ENST00000421851 PSEN2P49810 448 aa10.53□□□□□ -0.72
RC3H1-IT1-201ENST00000421851 PER1O15534 1290 aaPredicted RBP10.52□□□□□ -0.73
RC3H1-IT1-201ENST00000421851 TMEM88BA6NKF7 163 aa10.51□□□□□ -0.73
RC3H1-IT1-201ENST00000421851 SND1Q7KZF4 910 aaKnown RBP eCLIP10.51□□□□□ -0.73
RC3H1-IT1-201ENST00000421851 FAM98CQ17RN3 349 aaKnown RBP10.5□□□□□ -0.73
RC3H1-IT1-201ENST00000421851 KMT5BQ4FZB7 885 aa10.5□□□□□ -0.73
RC3H1-IT1-201ENST00000421851 B4GALNT3Q6L9W6 998 aa10.5□□□□□ -0.73
RC3H1-IT1-201ENST00000421851 SAMD7Q7Z3H4 446 aa10.5□□□□□ -0.73
RC3H1-IT1-201ENST00000421851 RETREG3Q86VR2 466 aa10.5□□□□□ -0.73
RC3H1-IT1-201ENST00000421851 ERBB3P21860 1342 aa10.5□□□□□ -0.73
RC3H1-IT1-201ENST00000421851 NR1H3Q13133 447 aa10.49□□□□□ -0.73
RC3H1-IT1-201ENST00000421851 Q3C1V9 767 aa10.47□□□□□ -0.73
RC3H1-IT1-201ENST00000421851 ARHGAP33O14559 1287 aa10.46□□□□□ -0.73
RC3H1-IT1-201ENST00000421851 PUS10Q3MIT2 529 aaKnown RBP10.46□□□□□ -0.73
RC3H1-IT1-201ENST00000421851 ZBBXA8MT70 800 aa10.45□□□□□ -0.74
RC3H1-IT1-201ENST00000421851 SKIP12755 728 aa10.45□□□□□ -0.74
RC3H1-IT1-201ENST00000421851 KANK4Q5T7N3 995 aaPredicted RBP10.45□□□□□ -0.74
RC3H1-IT1-201ENST00000421851 DESI1Q6ICB0 168 aa10.45□□□□□ -0.74
RC3H1-IT1-201ENST00000421851 FBXO45P0C2W1 286 aa10.44□□□□□ -0.74
RC3H1-IT1-201ENST00000421851 MORN1Q5T089 497 aa10.44□□□□□ -0.74
RC3H1-IT1-201ENST00000421851 LYPD8Q6UX82 237 aa10.44□□□□□ -0.74
RC3H1-IT1-201ENST00000421851 CCER1Q8TC90 406 aaPredicted RBP10.44□□□□□ -0.74
RC3H1-IT1-201ENST00000421851 AMOTL2Q9Y2J4 779 aa10.44□□□□□ -0.74
RC3H1-IT1-201ENST00000421851 SLC27A5Q9Y2P5 690 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms