RNA–Protein interactions for RNA: ENST00000421816.6

GCDH-202, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,109 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-202ENST00000421816 ATF3P18847 181 aa27.72■■■□□ 2.03
GCDH-202ENST00000421816 PIP4K2BP78356 416 aa27.72■■■□□ 2.03
GCDH-202ENST00000421816 CDC42BPGQ6DT37 1551 aa27.7■■■□□ 2.03
GCDH-202ENST00000421816 PRAM1Q96QH2 718 aa27.7■■■□□ 2.02
GCDH-202ENST00000421816 SLAIN2Q9P270 581 aa27.7■■■□□ 2.02
GCDH-202ENST00000421816 SCAF1Q9H7N4 1312 aaKnown RBP27.67■■■□□ 2.02
GCDH-202ENST00000421816 MST1RQ04912 1400 aa27.67■■■□□ 2.02
GCDH-202ENST00000421816 RALGAPBQ86X10 1494 aa27.67■■■□□ 2.02
GCDH-202ENST00000421816 ROBO1Q9Y6N7 1651 aa27.66■■■□□ 2.02
GCDH-202ENST00000421816 ROCK2O75116 1388 aaKnown RBP27.66■■■□□ 2.02
GCDH-202ENST00000421816 GPRASP1Q5JY77 1395 aa27.66■■■□□ 2.02
GCDH-202ENST00000421816 POGKQ9P215 609 aa27.66■■■□□ 2.02
GCDH-202ENST00000421816 ADGRB2O60241 1585 aa27.64■■■□□ 2.01
GCDH-202ENST00000421816 FMN2Q9NZ56 1722 aa27.61■■■□□ 2.01
GCDH-202ENST00000421816 SAFB2Q14151 953 aaKnown RBP eCLIP27.61■■■□□ 2.01
GCDH-202ENST00000421816 C1orf167Q5SNV9 1468 aa27.59■■■□□ 2.01
GCDH-202ENST00000421816 MINK1Q8N4C8 1332 aaPredicted RBP27.55■■■□□ 2
GCDH-202ENST00000421816 HSPA1LP34931 641 aa27.54■■■□□ 2
GCDH-202ENST00000421816 BRINP3Q76B58 766 aa27.54■■■□□ 2
GCDH-202ENST00000421816 CARD11Q9BXL7 1154 aa27.54■■■□□ 2
GCDH-202ENST00000421816 QRICH2Q9H0J4 1663 aa27.54■■■□□ 2
GCDH-202ENST00000421816 CENPJQ9HC77 1338 aaPredicted RBP27.53■■■□□ 2
GCDH-202ENST00000421816 HIRIP3Q9BW71 556 aaPredicted RBP27.52■■■□□ 2
GCDH-202ENST00000421816 AHDC1Q5TGY3 1603 aaPredicted RBP27.51■■□□□ 1.99
GCDH-202ENST00000421816 EIF3AQ14152 1382 aaKnown RBP27.5■■□□□ 1.99
GCDH-202ENST00000421816 NHSL1Q5SYE7 1610 aa27.49■■□□□ 1.99
GCDH-202ENST00000421816 USP32Q8NFA0 1604 aa27.49■■□□□ 1.99
GCDH-202ENST00000421816 RGPD8O14715 1765 aaPredicted RBP27.49■■□□□ 1.99
GCDH-202ENST00000421816 PHLPP1O60346 1717 aa27.49■■□□□ 1.99
GCDH-202ENST00000421816 WASLO00401 505 aaPredicted RBP27.48■■□□□ 1.99
GCDH-202ENST00000421816 ORAI2Q96SN7 254 aa27.47■■□□□ 1.99
GCDH-202ENST00000421816 ANKARQ7Z5J8 1434 aa27.47■■□□□ 1.99
GCDH-202ENST00000421816 TULP4Q9NRJ4 1543 aa27.46■■□□□ 1.99
GCDH-202ENST00000421816 NUTM2FA1L443 756 aa27.46■■□□□ 1.99
GCDH-202ENST00000421816 COL16A1Q07092 1604 aaPredicted RBP27.44■■□□□ 1.98
GCDH-202ENST00000421816 ESCO1Q5FWF5 840 aa27.43■■□□□ 1.98
GCDH-202ENST00000421816 KIF1AQ12756 1690 aa27.43■■□□□ 1.98
GCDH-202ENST00000421816 PRR36Q9H6K5 1346 aa27.41■■□□□ 1.98
GCDH-202ENST00000421816 SBNO2Q9Y2G9 1366 aa27.4■■□□□ 1.98
GCDH-202ENST00000421816 CDK19Q9BWU1 502 aa27.4■■□□□ 1.98
GCDH-202ENST00000421816 ATP7BP35670 1465 aa27.38■■□□□ 1.97
GCDH-202ENST00000421816 ITSN1Q15811 1721 aa27.38■■□□□ 1.97
GCDH-202ENST00000421816 TOPAZ1Q8N9V7 1692 aa27.36■■□□□ 1.97
GCDH-202ENST00000421816 DDX17Q92841 729 aaKnown RBP27.36■■□□□ 1.97
GCDH-202ENST00000421816 PHF8Q9UPP1 1060 aa27.35■■□□□ 1.97
GCDH-202ENST00000421816 USP47Q96K76 1375 aa27.35■■□□□ 1.97
GCDH-202ENST00000421816 NUDT16Q96DE0 195 aaKnown RBP27.34■■□□□ 1.97
GCDH-202ENST00000421816 EVC2Q86UK5 1308 aa27.34■■□□□ 1.97
GCDH-202ENST00000421816 SOS2Q07890 1332 aaPredicted RBP27.33■■□□□ 1.97
GCDH-202ENST00000421816 NPHP3Q7Z494 1330 aa27.33■■□□□ 1.97
GCDH-202ENST00000421816 PXDNQ92626 1479 aa27.32■■□□□ 1.96
GCDH-202ENST00000421816 ST20-MTHFSA0A0A6YYL1 179 aa27.32■■□□□ 1.96
GCDH-202ENST00000421816 FOXO3O43524 673 aa27.31■■□□□ 1.96
GCDH-202ENST00000421816 SRPK2P78362 688 aaKnown RBP27.3■■□□□ 1.96
GCDH-202ENST00000421816 TESK2Q96S53 571 aa27.3■■□□□ 1.96
GCDH-202ENST00000421816 SHPRHQ149N8 1683 aa27.3■■□□□ 1.96
GCDH-202ENST00000421816 CABP2Q9NPB3 220 aa27.29■■□□□ 1.96
GCDH-202ENST00000421816 JCADQ9P266 1359 aa27.29■■□□□ 1.96
GCDH-202ENST00000421816 CCDC61Q9Y6R9 512 aa27.28■■□□□ 1.96
GCDH-202ENST00000421816 PMFBP1Q8TBY8 1022 aa27.27■■□□□ 1.96
GCDH-202ENST00000421816 LRRC59Q96AG4 307 aaKnown RBP27.27■■□□□ 1.96
GCDH-202ENST00000421816 PLEKHG3A1L390 1219 aa27.24■■□□□ 1.95
GCDH-202ENST00000421816 SLC24A1O60721 1099 aa27.23■■□□□ 1.95
GCDH-202ENST00000421816 XPCQ01831 940 aaPredicted RBP27.23■■□□□ 1.95
GCDH-202ENST00000421816 KRT28Q7Z3Y7 464 aa27.23■■□□□ 1.95
GCDH-202ENST00000421816 PPIP5K1Q6PFW1 1433 aa27.23■■□□□ 1.95
GCDH-202ENST00000421816 POLR3AO14802 1390 aaPredicted RBP27.22■■□□□ 1.95
GCDH-202ENST00000421816 TRPM3Q9HCF6 1732 aaPredicted RBP27.21■■□□□ 1.95
GCDH-202ENST00000421816 PNPLA6Q8IY17 1366 aa27.21■■□□□ 1.95
GCDH-202ENST00000421816 PUS7Q96PZ0 661 aaKnown RBP27.2■■□□□ 1.94
GCDH-202ENST00000421816 ATAD2Q6PL18 1390 aa27.2■■□□□ 1.94
GCDH-202ENST00000421816 PSME1Q06323 249 aa27.19■■□□□ 1.94
GCDH-202ENST00000421816 NGDNQ8NEJ9 315 aaKnown RBP27.19■■□□□ 1.94
GCDH-202ENST00000421816 SBNO1A3KN83 1393 aa27.19■■□□□ 1.94
GCDH-202ENST00000421816 COL22A1Q8NFW1 1626 aaPredicted RBP27.18■■□□□ 1.94
GCDH-202ENST00000421816 MED1Q15648 1581 aaPredicted RBP27.18■■□□□ 1.94
GCDH-202ENST00000421816 ACEP12821 1306 aa27.17■■□□□ 1.94
GCDH-202ENST00000421816 EIF4G2P78344 907 aaKnown RBP eCLIP27.17■■□□□ 1.94
GCDH-202ENST00000421816 SPATA31A6Q5VVP1 1343 aa27.16■■□□□ 1.94
GCDH-202ENST00000421816 SPATA31A3Q5VYP0 1347 aa27.16■■□□□ 1.94
GCDH-202ENST00000421816 CABP1Q9NZU7 370 aa27.16■■□□□ 1.94
GCDH-202ENST00000421816 DISP3Q9P2K9 1392 aa27.15■■□□□ 1.94
GCDH-202ENST00000421816 TNS3Q68CZ2 1445 aa27.15■■□□□ 1.94
GCDH-202ENST00000421816 HSPA5P11021 654 aaKnown RBP27.14■■□□□ 1.94
GCDH-202ENST00000421816 TMF1P82094 1093 aa27.14■■□□□ 1.94
GCDH-202ENST00000421816 ALS2Q96Q42 1657 aa27.14■■□□□ 1.93
GCDH-202ENST00000421816 AKAP12Q02952 1782 aa27.12■■□□□ 1.93
GCDH-202ENST00000421816 LRP6O75581 1613 aa27.11■■□□□ 1.93
GCDH-202ENST00000421816 CPSF1Q10570 1443 aaKnown RBP27.08■■□□□ 1.93
GCDH-202ENST00000421816 ARHGEF10O15013 1369 aa27.08■■□□□ 1.93
GCDH-202ENST00000421816 BRD4O60885 1362 aaPredicted RBP27.07■■□□□ 1.92
GCDH-202ENST00000421816 USP6P35125 1406 aa27.07■■□□□ 1.92
GCDH-202ENST00000421816 CD163L1Q9NR16 1453 aa27.06■■□□□ 1.92
GCDH-202ENST00000421816 MON2Q7Z3U7 1717 aa27.05■■□□□ 1.92
GCDH-202ENST00000421816 CDCA8Q53HL2 280 aa27.05■■□□□ 1.92
GCDH-202ENST00000421816 NINLQ9Y2I6 1382 aa27.05■■□□□ 1.92
GCDH-202ENST00000421816 SSH2Q76I76 1423 aa27.05■■□□□ 1.92
GCDH-202ENST00000421816 ZNF692Q9BU19 519 aaPredicted RBP27.04■■□□□ 1.92
GCDH-202ENST00000421816 NUTM2BA6NNL0 878 aaPredicted RBP27.03■■□□□ 1.92
GCDH-202ENST00000421816 NUTM2EB1AL46 878 aaPredicted RBP27.03■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms