RNA–Protein interactions for RNA: ENST00000421340.5

ABCF3-202, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 690 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-202ENST00000421340 PLEKHH1Q9ULM0 1364 aa29.94■■■□□ 2.38
ABCF3-202ENST00000421340 QRICH2Q9H0J4 1663 aa29.94■■■□□ 2.38
ABCF3-202ENST00000421340 NWD1Q149M9 1564 aa29.92■■■□□ 2.38
ABCF3-202ENST00000421340 SAFB2Q14151 953 aaKnown RBP eCLIP29.91■■■□□ 2.38
ABCF3-202ENST00000421340 MINK1Q8N4C8 1332 aaPredicted RBP29.89■■■□□ 2.38
ABCF3-202ENST00000421340 AEBP2Q6ZN18 517 aaPredicted RBP29.88■■■□□ 2.37
ABCF3-202ENST00000421340 NKTRP30414 1462 aaKnown RBP29.87■■■□□ 2.37
ABCF3-202ENST00000421340 DDX10Q13206 875 aaKnown RBP29.85■■■□□ 2.37
ABCF3-202ENST00000421340 TULP4Q9NRJ4 1543 aa29.84■■■□□ 2.37
ABCF3-202ENST00000421340 WASLO00401 505 aaPredicted RBP29.83■■■□□ 2.37
ABCF3-202ENST00000421340 CDK19Q9BWU1 502 aa29.82■■■□□ 2.36
ABCF3-202ENST00000421340 ADGRB2O60241 1585 aa29.81■■■□□ 2.36
ABCF3-202ENST00000421340 NCOA3Q9Y6Q9 1424 aa29.8■■■□□ 2.36
ABCF3-202ENST00000421340 POLR3GLQ9BT43 218 aa29.8■■■□□ 2.36
ABCF3-202ENST00000421340 DIEXFQ68CQ4 756 aaKnown RBP29.79■■■□□ 2.36
ABCF3-202ENST00000421340 PROSER2Q86WR7 435 aaPredicted RBP29.79■■■□□ 2.36
ABCF3-202ENST00000421340 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.78■■■□□ 2.36
ABCF3-202ENST00000421340 ATAD2Q6PL18 1390 aa29.77■■■□□ 2.36
ABCF3-202ENST00000421340 SRPK2P78362 688 aaKnown RBP29.77■■■□□ 2.36
ABCF3-202ENST00000421340 CABP2Q9NPB3 220 aa29.76■■■□□ 2.35
ABCF3-202ENST00000421340 NINLQ9Y2I6 1382 aa29.75■■■□□ 2.35
ABCF3-202ENST00000421340 ADGRL3Q9HAR2 1447 aa29.72■■■□□ 2.35
ABCF3-202ENST00000421340 ZNF335Q9H4Z2 1342 aaPredicted RBP29.7■■■□□ 2.34
ABCF3-202ENST00000421340 STRCP1A6NGW2 1772 aa29.68■■■□□ 2.34
ABCF3-202ENST00000421340 C19orf44Q9H6X5 657 aa29.68■■■□□ 2.34
ABCF3-202ENST00000421340 TMEM94Q12767 1356 aa29.67■■■□□ 2.34
ABCF3-202ENST00000421340 NUDT16Q96DE0 195 aaKnown RBP29.67■■■□□ 2.34
ABCF3-202ENST00000421340 CCDC61Q9Y6R9 512 aa29.67■■■□□ 2.34
ABCF3-202ENST00000421340 PANK3Q9H999 370 aa29.66■■■□□ 2.34
ABCF3-202ENST00000421340 CDC42BPGQ6DT37 1551 aa29.65■■■□□ 2.34
ABCF3-202ENST00000421340 ANKARQ7Z5J8 1434 aa29.64■■■□□ 2.34
ABCF3-202ENST00000421340 C14orf37Q86TY3 774 aa29.64■■■□□ 2.34
ABCF3-202ENST00000421340 TMC1Q8TDI8 760 aa29.64■■■□□ 2.34
ABCF3-202ENST00000421340 SLC12A5Q9H2X9 1139 aa29.64■■■□□ 2.34
ABCF3-202ENST00000421340 LRRC7Q96NW7 1537 aa29.63■■■□□ 2.33
ABCF3-202ENST00000421340 RBM33Q96EV2 1170 aaKnown RBP29.63■■■□□ 2.33
ABCF3-202ENST00000421340 PER1O15534 1290 aaPredicted RBP29.62■■■□□ 2.33
ABCF3-202ENST00000421340 MYOM1P52179 1685 aa29.61■■■□□ 2.33
ABCF3-202ENST00000421340 PRR36Q9H6K5 1346 aa29.61■■■□□ 2.33
ABCF3-202ENST00000421340 DCCP43146 1447 aa29.61■■■□□ 2.33
ABCF3-202ENST00000421340 ATP7BP35670 1465 aa29.61■■■□□ 2.33
ABCF3-202ENST00000421340 NALCNQ8IZF0 1738 aa29.6■■■□□ 2.33
ABCF3-202ENST00000421340 CABP1Q9NZU7 370 aa29.6■■■□□ 2.33
ABCF3-202ENST00000421340 PLEKHG3A1L390 1219 aa29.59■■■□□ 2.33
ABCF3-202ENST00000421340 TERF2IPQ9NYB0 399 aa29.59■■■□□ 2.33
ABCF3-202ENST00000421340 ANKRD36BQ8N2N9 1353 aa29.59■■■□□ 2.33
ABCF3-202ENST00000421340 PPIP5K1Q6PFW1 1433 aa29.56■■■□□ 2.32
ABCF3-202ENST00000421340 FMN2Q9NZ56 1722 aa29.55■■■□□ 2.32
ABCF3-202ENST00000421340 MSH6P52701 1360 aa29.54■■■□□ 2.32
ABCF3-202ENST00000421340 HDGFL2Q7Z4V5 671 aaPredicted RBP29.54■■■□□ 2.32
ABCF3-202ENST00000421340 CADPS2Q86UW7 1296 aa29.54■■■□□ 2.32
ABCF3-202ENST00000421340 ATF3P18847 181 aa29.53■■■□□ 2.32
ABCF3-202ENST00000421340 ZNF692Q9BU19 519 aaPredicted RBP29.53■■■□□ 2.32
ABCF3-202ENST00000421340 KNSTRNQ9Y448 316 aa29.53■■■□□ 2.32
ABCF3-202ENST00000421340 CARD14Q9BXL6 1004 aa29.52■■■□□ 2.32
ABCF3-202ENST00000421340 CD163L1Q9NR16 1453 aa29.51■■■□□ 2.31
ABCF3-202ENST00000421340 CPSF1Q10570 1443 aaKnown RBP29.51■■■□□ 2.31
ABCF3-202ENST00000421340 LTBP4Q8N2S1 1624 aa29.5■■■□□ 2.31
ABCF3-202ENST00000421340 USP32Q8NFA0 1604 aa29.5■■■□□ 2.31
ABCF3-202ENST00000421340 NUTM2FA1L443 756 aa29.49■■■□□ 2.31
ABCF3-202ENST00000421340 ANP32CO43423 234 aa29.49■■■□□ 2.31
ABCF3-202ENST00000421340 TOPAZ1Q8N9V7 1692 aa29.49■■■□□ 2.31
ABCF3-202ENST00000421340 A0A1W2PP64 1363 aa29.49■■■□□ 2.31
ABCF3-202ENST00000421340 NPC1L1Q9UHC9 1359 aa29.49■■■□□ 2.31
ABCF3-202ENST00000421340 POLR3AO14802 1390 aaPredicted RBP29.46■■■□□ 2.31
ABCF3-202ENST00000421340 XIRP1Q702N8 1843 aaKnown RBP29.45■■■□□ 2.3
ABCF3-202ENST00000421340 KTN1Q86UP2 1357 aaKnown RBP29.44■■■□□ 2.3
ABCF3-202ENST00000421340 AMER1Q5JTC6 1135 aaPredicted RBP29.44■■■□□ 2.3
ABCF3-202ENST00000421340 ITSN1Q15811 1721 aa29.44■■■□□ 2.3
ABCF3-202ENST00000421340 ACEP12821 1306 aa29.44■■■□□ 2.3
ABCF3-202ENST00000421340 C1orf167Q5SNV9 1468 aa29.43■■■□□ 2.3
ABCF3-202ENST00000421340 PHF8Q9UPP1 1060 aa29.43■■■□□ 2.3
ABCF3-202ENST00000421340 MST1RQ04912 1400 aa29.43■■■□□ 2.3
ABCF3-202ENST00000421340 NSD3Q9BZ95 1437 aa29.43■■■□□ 2.3
ABCF3-202ENST00000421340 PRKRIP1Q9H875 184 aaPredicted RBP29.41■■■□□ 2.3
ABCF3-202ENST00000421340 CGNL1Q0VF96 1302 aa29.41■■■□□ 2.3
ABCF3-202ENST00000421340 ESCO1Q5FWF5 840 aa29.4■■■□□ 2.3
ABCF3-202ENST00000421340 MIER1Q8N108 512 aa29.4■■■□□ 2.3
ABCF3-202ENST00000421340 NGDNQ8NEJ9 315 aaKnown RBP29.4■■■□□ 2.3
ABCF3-202ENST00000421340 EDC4Q6P2E9 1401 aaKnown RBP29.39■■■□□ 2.3
ABCF3-202ENST00000421340 RALBP1Q15311 655 aa29.39■■■□□ 2.3
ABCF3-202ENST00000421340 BRD4O60885 1362 aaPredicted RBP29.39■■■□□ 2.29
ABCF3-202ENST00000421340 PMFBP1Q8TBY8 1022 aa29.38■■■□□ 2.29
ABCF3-202ENST00000421340 NSD2O96028 1365 aa29.37■■■□□ 2.29
ABCF3-202ENST00000421340 ORAI2Q96SN7 254 aa29.35■■■□□ 2.29
ABCF3-202ENST00000421340 SLAIN2Q9P270 581 aa29.35■■■□□ 2.29
ABCF3-202ENST00000421340 USP6P35125 1406 aa29.35■■■□□ 2.29
ABCF3-202ENST00000421340 PARD3Q8TEW0 1356 aa29.33■■■□□ 2.29
ABCF3-202ENST00000421340 SSH2Q76I76 1423 aa29.33■■■□□ 2.29
ABCF3-202ENST00000421340 RGPD8O14715 1765 aaPredicted RBP29.33■■■□□ 2.29
ABCF3-202ENST00000421340 AKAP12Q02952 1782 aa29.32■■■□□ 2.28
ABCF3-202ENST00000421340 FYB1O15117 783 aa29.31■■■□□ 2.28
ABCF3-202ENST00000421340 CC2D1BQ5T0F9 858 aaKnown RBP29.31■■■□□ 2.28
ABCF3-202ENST00000421340 TTC21BQ7Z4L5 1316 aa29.3■■■□□ 2.28
ABCF3-202ENST00000421340 TTC21AQ8NDW8 1320 aa29.3■■■□□ 2.28
ABCF3-202ENST00000421340 MON2Q7Z3U7 1717 aa29.3■■■□□ 2.28
ABCF3-202ENST00000421340 KIF1AQ12756 1690 aa29.29■■■□□ 2.28
ABCF3-202ENST00000421340 CCER2I3L3R5 266 aa29.29■■■□□ 2.28
ABCF3-202ENST00000421340 PSME1Q06323 249 aa29.27■■■□□ 2.28
ABCF3-202ENST00000421340 IQSEC2Q5JU85 1478 aa29.27■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms