RNA–Protein interactions for RNA: ENST00000420774.1

AC004540.1-205, humanhuman

TSL 2

Gene AC004540.1, Length 496 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-205ENST00000420774 FAM135BQ49AJ0 1406 aa18.13■□□□□ 0.49
AC004540.1-205ENST00000420774 TIMELESSQ9UNS1 1208 aa18.12■□□□□ 0.49
AC004540.1-205ENST00000420774 QRICH2Q9H0J4 1663 aa18.1■□□□□ 0.49
AC004540.1-205ENST00000420774 GPRASP1Q5JY77 1395 aa18.1■□□□□ 0.49
AC004540.1-205ENST00000420774 C19orf44Q9H6X5 657 aa18.09■□□□□ 0.49
AC004540.1-205ENST00000420774 POGKQ9P215 609 aa18.09■□□□□ 0.49
AC004540.1-205ENST00000420774 CDC42BPGQ6DT37 1551 aa18.08■□□□□ 0.49
AC004540.1-205ENST00000420774 PIP4K2BP78356 416 aa18.08■□□□□ 0.48
AC004540.1-205ENST00000420774 SIRT1Q96EB6 747 aa18.08■□□□□ 0.48
AC004540.1-205ENST00000420774 DCCP43146 1447 aa18.07■□□□□ 0.48
AC004540.1-205ENST00000420774 FMN2Q9NZ56 1722 aa18.07■□□□□ 0.48
AC004540.1-205ENST00000420774 SCAF1Q9H7N4 1312 aaKnown RBP18.07■□□□□ 0.48
AC004540.1-205ENST00000420774 TOM1O60784 492 aa18.07■□□□□ 0.48
AC004540.1-205ENST00000420774 FBXO41Q8TF61 875 aa18.07■□□□□ 0.48
AC004540.1-205ENST00000420774 ROBO1Q9Y6N7 1651 aa18.06■□□□□ 0.48
AC004540.1-205ENST00000420774 ADGRB2O60241 1585 aa18.06■□□□□ 0.48
AC004540.1-205ENST00000420774 ATF3P18847 181 aa18.06■□□□□ 0.48
AC004540.1-205ENST00000420774 HIRIP3Q9BW71 556 aaPredicted RBP18.06■□□□□ 0.48
AC004540.1-205ENST00000420774 CARD11Q9BXL7 1154 aa18.06■□□□□ 0.48
AC004540.1-205ENST00000420774 RGPD8O14715 1765 aaPredicted RBP18.06■□□□□ 0.48
AC004540.1-205ENST00000420774 MINK1Q8N4C8 1332 aaPredicted RBP18.05■□□□□ 0.48
AC004540.1-205ENST00000420774 MST1RQ04912 1400 aa18.05■□□□□ 0.48
AC004540.1-205ENST00000420774 CADPS2Q86UW7 1296 aa18.04■□□□□ 0.48
AC004540.1-205ENST00000420774 CENPJQ9HC77 1338 aaPredicted RBP18.02■□□□□ 0.48
AC004540.1-205ENST00000420774 NUTM2FA1L443 756 aa18.02■□□□□ 0.48
AC004540.1-205ENST00000420774 SLAIN2Q9P270 581 aa18.02■□□□□ 0.48
AC004540.1-205ENST00000420774 USP32Q8NFA0 1604 aa18.01■□□□□ 0.47
AC004540.1-205ENST00000420774 ILDR1Q86SU0 546 aaPredicted RBP18.01■□□□□ 0.47
AC004540.1-205ENST00000420774 C1orf167Q5SNV9 1468 aa18.01■□□□□ 0.47
AC004540.1-205ENST00000420774 EIF3AQ14152 1382 aaKnown RBP17.99■□□□□ 0.47
AC004540.1-205ENST00000420774 TULP4Q9NRJ4 1543 aa17.98■□□□□ 0.47
AC004540.1-205ENST00000420774 USP47Q96K76 1375 aa17.97■□□□□ 0.47
AC004540.1-205ENST00000420774 ORAI2Q96SN7 254 aa17.96■□□□□ 0.47
AC004540.1-205ENST00000420774 NHSL1Q5SYE7 1610 aa17.95■□□□□ 0.46
AC004540.1-205ENST00000420774 WASLO00401 505 aaPredicted RBP17.95■□□□□ 0.46
AC004540.1-205ENST00000420774 BRINP3Q76B58 766 aa17.95■□□□□ 0.46
AC004540.1-205ENST00000420774 PHLPP1O60346 1717 aa17.95■□□□□ 0.46
AC004540.1-205ENST00000420774 PRR36Q9H6K5 1346 aa17.94■□□□□ 0.46
AC004540.1-205ENST00000420774 TOPAZ1Q8N9V7 1692 aa17.93■□□□□ 0.46
AC004540.1-205ENST00000420774 ITSN1Q15811 1721 aa17.93■□□□□ 0.46
AC004540.1-205ENST00000420774 ST20-MTHFSA0A0A6YYL1 179 aa17.93■□□□□ 0.46
AC004540.1-205ENST00000420774 DDX17Q92841 729 aaKnown RBP17.93■□□□□ 0.46
AC004540.1-205ENST00000420774 CDK19Q9BWU1 502 aa17.93■□□□□ 0.46
AC004540.1-205ENST00000420774 ATP7BP35670 1465 aa17.93■□□□□ 0.46
AC004540.1-205ENST00000420774 HSPA1LP34931 641 aa17.92■□□□□ 0.46
AC004540.1-205ENST00000420774 AHDC1Q5TGY3 1603 aaPredicted RBP17.91■□□□□ 0.46
AC004540.1-205ENST00000420774 KIF1AQ12756 1690 aa17.91■□□□□ 0.46
AC004540.1-205ENST00000420774 ESCO1Q5FWF5 840 aa17.91■□□□□ 0.46
AC004540.1-205ENST00000420774 COL16A1Q07092 1604 aaPredicted RBP17.9■□□□□ 0.46
AC004540.1-205ENST00000420774 ANKARQ7Z5J8 1434 aa17.9■□□□□ 0.46
AC004540.1-205ENST00000420774 CABP2Q9NPB3 220 aa17.9■□□□□ 0.46
AC004540.1-205ENST00000420774 SBNO2Q9Y2G9 1366 aa17.9■□□□□ 0.46
AC004540.1-205ENST00000420774 TESK2Q96S53 571 aa17.89■□□□□ 0.45
AC004540.1-205ENST00000420774 SRPK2P78362 688 aaKnown RBP17.88■□□□□ 0.45
AC004540.1-205ENST00000420774 NUDT16Q96DE0 195 aaKnown RBP17.87■□□□□ 0.45
AC004540.1-205ENST00000420774 EVC2Q86UK5 1308 aa17.87■□□□□ 0.45
AC004540.1-205ENST00000420774 PMFBP1Q8TBY8 1022 aa17.86■□□□□ 0.45
AC004540.1-205ENST00000420774 FOXO3O43524 673 aa17.85■□□□□ 0.45
AC004540.1-205ENST00000420774 HSPA5P11021 654 aaKnown RBP17.85■□□□□ 0.45
AC004540.1-205ENST00000420774 XPCQ01831 940 aaPredicted RBP17.85■□□□□ 0.45
AC004540.1-205ENST00000420774 DISP3Q9P2K9 1392 aa17.85■□□□□ 0.45
AC004540.1-205ENST00000420774 PHF8Q9UPP1 1060 aa17.85■□□□□ 0.45
AC004540.1-205ENST00000420774 PXDNQ92626 1479 aa17.83■□□□□ 0.45
AC004540.1-205ENST00000420774 PPIP5K1Q6PFW1 1433 aa17.83■□□□□ 0.45
AC004540.1-205ENST00000420774 EIF4G2P78344 907 aaKnown RBP eCLIP17.83■□□□□ 0.44
AC004540.1-205ENST00000420774 TRPM3Q9HCF6 1732 aaPredicted RBP17.81■□□□□ 0.44
AC004540.1-205ENST00000420774 NPHP3Q7Z494 1330 aa17.8■□□□□ 0.44
AC004540.1-205ENST00000420774 CCDC61Q9Y6R9 512 aa17.8■□□□□ 0.44
AC004540.1-205ENST00000420774 AKAP12Q02952 1782 aa17.79■□□□□ 0.44
AC004540.1-205ENST00000420774 SOS2Q07890 1332 aaPredicted RBP17.79■□□□□ 0.44
AC004540.1-205ENST00000420774 SHPRHQ149N8 1683 aa17.79■□□□□ 0.44
AC004540.1-205ENST00000420774 MYOM1P52179 1685 aa17.78■□□□□ 0.44
AC004540.1-205ENST00000420774 CABP1Q9NZU7 370 aa17.78■□□□□ 0.44
AC004540.1-205ENST00000420774 ATAD2Q6PL18 1390 aa17.78■□□□□ 0.44
AC004540.1-205ENST00000420774 ACEP12821 1306 aa17.77■□□□□ 0.44
AC004540.1-205ENST00000420774 TMF1P82094 1093 aa17.77■□□□□ 0.44
AC004540.1-205ENST00000420774 NGDNQ8NEJ9 315 aaKnown RBP17.77■□□□□ 0.44
AC004540.1-205ENST00000420774 POLR3AO14802 1390 aaPredicted RBP17.77■□□□□ 0.43
AC004540.1-205ENST00000420774 PLEKHG3A1L390 1219 aa17.76■□□□□ 0.43
AC004540.1-205ENST00000420774 KRT28Q7Z3Y7 464 aa17.76■□□□□ 0.43
AC004540.1-205ENST00000420774 ALS2Q96Q42 1657 aa17.75■□□□□ 0.43
AC004540.1-205ENST00000420774 PSME1Q06323 249 aa17.75■□□□□ 0.43
AC004540.1-205ENST00000420774 MON2Q7Z3U7 1717 aa17.75■□□□□ 0.43
AC004540.1-205ENST00000420774 CD163L1Q9NR16 1453 aa17.74■□□□□ 0.43
AC004540.1-205ENST00000420774 TMC1Q8TDI8 760 aa17.73■□□□□ 0.43
AC004540.1-205ENST00000420774 LRRC59Q96AG4 307 aaKnown RBP17.73■□□□□ 0.43
AC004540.1-205ENST00000420774 PNPLA6Q8IY17 1366 aa17.73■□□□□ 0.43
AC004540.1-205ENST00000420774 JCADQ9P266 1359 aa17.73■□□□□ 0.43
AC004540.1-205ENST00000420774 NRKQ7Z2Y5 1582 aa17.73■□□□□ 0.43
AC004540.1-205ENST00000420774 TNS3Q68CZ2 1445 aa17.72■□□□□ 0.43
AC004540.1-205ENST00000420774 COL22A1Q8NFW1 1626 aaPredicted RBP17.72■□□□□ 0.43
AC004540.1-205ENST00000420774 C11orf95C9JLR9 678 aaPredicted RBP17.72■□□□□ 0.43
AC004540.1-205ENST00000420774 SLC12A5Q9H2X9 1139 aa17.72■□□□□ 0.43
AC004540.1-205ENST00000420774 SLC24A1O60721 1099 aa17.71■□□□□ 0.43
AC004540.1-205ENST00000420774 PUS7Q96PZ0 661 aaKnown RBP17.71■□□□□ 0.43
AC004540.1-205ENST00000420774 POLR3GLQ9BT43 218 aa17.71■□□□□ 0.43
AC004540.1-205ENST00000420774 SPATA31A3Q5VYP0 1347 aa17.71■□□□□ 0.42
AC004540.1-205ENST00000420774 ABCA3Q99758 1704 aa17.7■□□□□ 0.42
AC004540.1-205ENST00000420774 ZEB1P37275 1124 aaPredicted RBP17.7■□□□□ 0.42
AC004540.1-205ENST00000420774 USP6P35125 1406 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 195.7 ms