RNA–Protein interactions for RNA: ENST00000420692.6

CTSB-203, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 2,230 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-203ENST00000420692 USP32Q8NFA0 1604 aa21.34■■□□□ 1.01
CTSB-203ENST00000420692 SHPRHQ149N8 1683 aa21.34■■□□□ 1.01
CTSB-203ENST00000420692 PUS7Q96PZ0 661 aaKnown RBP21.34■■□□□ 1.01
CTSB-203ENST00000420692 C20orf194Q5TEA3 1177 aa21.33■■□□□ 1.01
CTSB-203ENST00000420692 MORC1Q86VD1 984 aa21.33■■□□□ 1
CTSB-203ENST00000420692 CRBNQ96SW2 442 aa21.33■■□□□ 1
CTSB-203ENST00000420692 EVC2Q86UK5 1308 aa21.32■■□□□ 1
CTSB-203ENST00000420692 CABP2Q9NPB3 220 aa21.32■■□□□ 1
CTSB-203ENST00000420692 DMRT2Q9Y5R5 561 aa21.32■■□□□ 1
CTSB-203ENST00000420692 TNNT2P45379 298 aaPredicted RBP21.31■■□□□ 1
CTSB-203ENST00000420692 SAFB2Q14151 953 aaKnown RBP eCLIP21.31■■□□□ 1
CTSB-203ENST00000420692 STK26Q9P289 416 aa21.31■■□□□ 1
CTSB-203ENST00000420692 PTPRMP28827 1452 aa21.29■■□□□ 1
CTSB-203ENST00000420692 MYT1Q01538 1121 aa21.29■■□□□ 1
CTSB-203ENST00000420692 REREQ9P2R6 1566 aa21.29■■□□□ 1
CTSB-203ENST00000420692 ANKRD36BQ8N2N9 1353 aa21.28■■□□□ 1
CTSB-203ENST00000420692 AGLP35573 1532 aa21.27■■□□□ 1
CTSB-203ENST00000420692 CGNL1Q0VF96 1302 aa21.26■□□□□ 0.99
CTSB-203ENST00000420692 YTHDC2Q9H6S0 1430 aaKnown RBP21.25■□□□□ 0.99
CTSB-203ENST00000420692 CLTCQ00610 1675 aaKnown RBP21.24■□□□□ 0.99
CTSB-203ENST00000420692 MTHFSP49914 203 aa21.24■□□□□ 0.99
CTSB-203ENST00000420692 ALKQ9UM73 1620 aa21.24■□□□□ 0.99
CTSB-203ENST00000420692 PRAM1Q96QH2 718 aa21.23■□□□□ 0.99
CTSB-203ENST00000420692 NKTRP30414 1462 aaKnown RBP21.22■□□□□ 0.99
CTSB-203ENST00000420692 A0A1W2PP64 1363 aa21.22■□□□□ 0.99
CTSB-203ENST00000420692 WWC1Q8IX03 1113 aa21.21■□□□□ 0.99
CTSB-203ENST00000420692 NGEFQ8N5V2 710 aa21.21■□□□□ 0.99
CTSB-203ENST00000420692 PPP6R1Q9UPN7 881 aa21.21■□□□□ 0.99
CTSB-203ENST00000420692 E9PSI1 815 aa21.2■□□□□ 0.98
CTSB-203ENST00000420692 MINK1Q8N4C8 1332 aaPredicted RBP21.2■□□□□ 0.98
CTSB-203ENST00000420692 IQSEC2Q5JU85 1478 aa21.2■□□□□ 0.98
CTSB-203ENST00000420692 CD163L1Q9NR16 1453 aa21.2■□□□□ 0.98
CTSB-203ENST00000420692 NSD2O96028 1365 aa21.19■□□□□ 0.98
CTSB-203ENST00000420692 A2ML1A8K2U0 1454 aa21.19■□□□□ 0.98
CTSB-203ENST00000420692 SPATA31D1Q6ZQQ2 1576 aa21.19■□□□□ 0.98
CTSB-203ENST00000420692 ABCC11Q96J66 1382 aa21.19■□□□□ 0.98
CTSB-203ENST00000420692 SRPK2P78362 688 aaKnown RBP21.19■□□□□ 0.98
CTSB-203ENST00000420692 SKAP1Q86WV1 359 aa21.18■□□□□ 0.98
CTSB-203ENST00000420692 PHF23Q9BUL5 403 aaPredicted RBP21.18■□□□□ 0.98
CTSB-203ENST00000420692 BCAR3O75815 825 aa21.17■□□□□ 0.98
CTSB-203ENST00000420692 RUNDC1Q96C34 613 aa21.17■□□□□ 0.98
CTSB-203ENST00000420692 TCERG1O14776 1098 aaKnown RBP21.17■□□□□ 0.98
CTSB-203ENST00000420692 TCP11L2Q8N4U5 519 aa21.16■□□□□ 0.98
CTSB-203ENST00000420692 RRP7AQ9Y3A4 280 aaKnown RBP21.16■□□□□ 0.98
CTSB-203ENST00000420692 NINLQ9Y2I6 1382 aa21.16■□□□□ 0.98
CTSB-203ENST00000420692 KDM2BQ8NHM5 1336 aa21.16■□□□□ 0.98
CTSB-203ENST00000420692 MLECQ14165 292 aa21.16■□□□□ 0.98
CTSB-203ENST00000420692 KIF13AQ9H1H9 1805 aa21.15■□□□□ 0.98
CTSB-203ENST00000420692 ARHGEF40Q8TER5 1519 aa21.15■□□□□ 0.98
CTSB-203ENST00000420692 POGKQ9P215 609 aa21.15■□□□□ 0.98
CTSB-203ENST00000420692 SETD1AO15047 1707 aaKnown RBP21.15■□□□□ 0.98
CTSB-203ENST00000420692 STAG3Q9UJ98 1225 aa21.14■□□□□ 0.98
CTSB-203ENST00000420692 NLRP1Q9C000 1473 aa21.14■□□□□ 0.97
CTSB-203ENST00000420692 GGNBP2Q9H3C7 697 aa21.13■□□□□ 0.97
CTSB-203ENST00000420692 ATAD2Q6PL18 1390 aa21.13■□□□□ 0.97
CTSB-203ENST00000420692 NEUROD2Q15784 382 aa21.13■□□□□ 0.97
CTSB-203ENST00000420692 FYB1O15117 783 aa21.12■□□□□ 0.97
CTSB-203ENST00000420692 CDK19Q9BWU1 502 aa21.12■□□□□ 0.97
CTSB-203ENST00000420692 RIMS2Q9UQ26 1411 aa21.12■□□□□ 0.97
CTSB-203ENST00000420692 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.12■□□□□ 0.97
CTSB-203ENST00000420692 CFAP53Q96M91 514 aa21.12■□□□□ 0.97
CTSB-203ENST00000420692 PDE4AP27815 886 aa21.1■□□□□ 0.97
CTSB-203ENST00000420692 MS4A1P11836 297 aa21.09■□□□□ 0.97
CTSB-203ENST00000420692 WAPLQ7Z5K2 1190 aa21.09■□□□□ 0.97
CTSB-203ENST00000420692 ANKRD26Q9UPS8 1709 aa21.09■□□□□ 0.97
CTSB-203ENST00000420692 COL3A1P02461 1466 aaPredicted RBP21.09■□□□□ 0.97
CTSB-203ENST00000420692 NRXN3Q9Y4C0 1643 aa21.08■□□□□ 0.97
CTSB-203ENST00000420692 BACH2Q9BYV9 841 aa21.08■□□□□ 0.97
CTSB-203ENST00000420692 TERF2IPQ9NYB0 399 aa21.08■□□□□ 0.97
CTSB-203ENST00000420692 DLC1Q96QB1 1528 aa21.08■□□□□ 0.97
CTSB-203ENST00000420692 CABP1Q9NZU7 370 aa21.08■□□□□ 0.96
CTSB-203ENST00000420692 MED14O60244 1454 aa21.07■□□□□ 0.96
CTSB-203ENST00000420692 CCDC27Q2M243 656 aa21.07■□□□□ 0.96
CTSB-203ENST00000420692 ADGRB2O60241 1585 aa21.07■□□□□ 0.96
CTSB-203ENST00000420692 U2AF1L5P0DN76 240 aaPredicted RBP21.06■□□□□ 0.96
CTSB-203ENST00000420692 U2AF1Q01081 240 aaKnown RBP eCLIP21.06■□□□□ 0.96
CTSB-203ENST00000420692 WDR63Q8IWG1 891 aa21.06■□□□□ 0.96
CTSB-203ENST00000420692 PAK3O75914 559 aaPredicted RBP21.06■□□□□ 0.96
CTSB-203ENST00000420692 ZMYM3Q14202 1370 aa21.05■□□□□ 0.96
CTSB-203ENST00000420692 CENPQQ7L2Z9 268 aaPredicted RBP21.04■□□□□ 0.96
CTSB-203ENST00000420692 PLEKHF1Q96S99 279 aa21.04■□□□□ 0.96
CTSB-203ENST00000420692 NCBP3Q53F19 620 aaKnown RBP21.03■□□□□ 0.96
CTSB-203ENST00000420692 METP08581 1390 aa21.03■□□□□ 0.96
CTSB-203ENST00000420692 RARSP54136 660 aaKnown RBP21.02■□□□□ 0.96
CTSB-203ENST00000420692 IPO9Q96P70 1041 aaKnown RBP21.02■□□□□ 0.96
CTSB-203ENST00000420692 KIF20BQ96Q89 1820 aa21.01■□□□□ 0.95
CTSB-203ENST00000420692 HDGFL2Q7Z4V5 671 aaPredicted RBP21.01■□□□□ 0.95
CTSB-203ENST00000420692 NOP58Q9Y2X3 529 aaKnown RBP21.01■□□□□ 0.95
CTSB-203ENST00000420692 ANP32AP39687 249 aaKnown RBP21■□□□□ 0.95
CTSB-203ENST00000420692 PDE3AQ14432 1141 aa21■□□□□ 0.95
CTSB-203ENST00000420692 ERICH6Q7L0X2 663 aa21■□□□□ 0.95
CTSB-203ENST00000420692 PNPLA6Q8IY17 1366 aa20.99■□□□□ 0.95
CTSB-203ENST00000420692 PANK1Q8TE04 598 aa20.99■□□□□ 0.95
CTSB-203ENST00000420692 U2SURPO15042 1029 aaKnown RBP20.98■□□□□ 0.95
CTSB-203ENST00000420692 FBLN1P23142 703 aa20.97■□□□□ 0.95
CTSB-203ENST00000420692 TRIM35Q9UPQ4 493 aa20.97■□□□□ 0.95
CTSB-203ENST00000420692 ATP7BP35670 1465 aa20.96■□□□□ 0.95
CTSB-203ENST00000420692 TNNQ9UQP3 1299 aa20.96■□□□□ 0.95
CTSB-203ENST00000420692 IGHDP01880 384 aa20.96■□□□□ 0.95
CTSB-203ENST00000420692 TMPOP42166 694 aaKnown RBP20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms