RNA–Protein interactions for RNA: ENST00000420515.1

FAAP20-207, Transcript of FA core complex associated protein 20, humanhuman

TSL 1 (best)

Gene FAAP20, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAAP20-207ENST00000420515 ADGRB2O60241 1585 aa38.46■■■■□ 3.75
FAAP20-207ENST00000420515 MSH6P52701 1360 aa38.45■■■■□ 3.75
FAAP20-207ENST00000420515 USP47Q96K76 1375 aa38.45■■■■□ 3.75
FAAP20-207ENST00000420515 CENPJQ9HC77 1338 aaPredicted RBP38.45■■■■□ 3.75
FAAP20-207ENST00000420515 MINK1Q8N4C8 1332 aaPredicted RBP38.44■■■■□ 3.74
FAAP20-207ENST00000420515 EIF3AQ14152 1382 aaKnown RBP38.44■■■■□ 3.74
FAAP20-207ENST00000420515 CDC42BPGQ6DT37 1551 aa38.44■■■■□ 3.74
FAAP20-207ENST00000420515 HIRIP3Q9BW71 556 aaPredicted RBP38.43■■■■□ 3.74
FAAP20-207ENST00000420515 C19orf44Q9H6X5 657 aa38.43■■■■□ 3.74
FAAP20-207ENST00000420515 FMN2Q9NZ56 1722 aa38.39■■■■□ 3.74
FAAP20-207ENST00000420515 DCCP43146 1447 aa38.38■■■■□ 3.73
FAAP20-207ENST00000420515 ST20-MTHFSA0A0A6YYL1 179 aa38.36■■■■□ 3.73
FAAP20-207ENST00000420515 RGPD8O14715 1765 aaPredicted RBP38.36■■■■□ 3.73
FAAP20-207ENST00000420515 TULP4Q9NRJ4 1543 aa38.34■■■■□ 3.73
FAAP20-207ENST00000420515 USP32Q8NFA0 1604 aa38.32■■■■□ 3.72
FAAP20-207ENST00000420515 ZEB1P37275 1124 aaPredicted RBP38.31■■■■□ 3.72
FAAP20-207ENST00000420515 MST1RQ04912 1400 aa38.31■■■■□ 3.72
FAAP20-207ENST00000420515 ATF3P18847 181 aa38.3■■■■□ 3.72
FAAP20-207ENST00000420515 NUTM2FA1L443 756 aa38.28■■■■□ 3.72
FAAP20-207ENST00000420515 UBAP1LF5GYI3 381 aa38.28■■■■□ 3.72
FAAP20-207ENST00000420515 CADPS2Q86UW7 1296 aa38.28■■■■□ 3.72
FAAP20-207ENST00000420515 TESK2Q96S53 571 aa38.28■■■■□ 3.72
FAAP20-207ENST00000420515 HSPA5P11021 654 aaKnown RBP38.27■■■■□ 3.72
FAAP20-207ENST00000420515 SBNO2Q9Y2G9 1366 aa38.26■■■■□ 3.72
FAAP20-207ENST00000420515 WASLO00401 505 aaPredicted RBP38.24■■■■□ 3.71
FAAP20-207ENST00000420515 EIF4G2P78344 907 aaKnown RBP eCLIP38.23■■■■□ 3.71
FAAP20-207ENST00000420515 C1orf167Q5SNV9 1468 aa38.22■■■■□ 3.71
FAAP20-207ENST00000420515 ROBO1Q9Y6N7 1651 aa38.21■■■■□ 3.71
FAAP20-207ENST00000420515 TOM1O60784 492 aa38.21■■■■□ 3.71
FAAP20-207ENST00000420515 CDK19Q9BWU1 502 aa38.21■■■■□ 3.71
FAAP20-207ENST00000420515 SLAIN2Q9P270 581 aa38.2■■■■□ 3.71
FAAP20-207ENST00000420515 PRR36Q9H6K5 1346 aa38.18■■■■□ 3.7
FAAP20-207ENST00000420515 ATP7BP35670 1465 aa38.17■■■■□ 3.7
FAAP20-207ENST00000420515 PIP4K2BP78356 416 aa38.17■■■■□ 3.7
FAAP20-207ENST00000420515 TOPAZ1Q8N9V7 1692 aa38.17■■■■□ 3.7
FAAP20-207ENST00000420515 DISP3Q9P2K9 1392 aa38.15■■■■□ 3.7
FAAP20-207ENST00000420515 CABP2Q9NPB3 220 aa38.15■■■■□ 3.7
FAAP20-207ENST00000420515 EVC2Q86UK5 1308 aa38.13■■■■□ 3.7
FAAP20-207ENST00000420515 ITSN1Q15811 1721 aa38.13■■■■□ 3.69
FAAP20-207ENST00000420515 ORAI2Q96SN7 254 aa38.12■■■■□ 3.69
FAAP20-207ENST00000420515 ANKARQ7Z5J8 1434 aa38.11■■■■□ 3.69
FAAP20-207ENST00000420515 SCAF1Q9H7N4 1312 aaKnown RBP38.11■■■■□ 3.69
FAAP20-207ENST00000420515 SRPK2P78362 688 aaKnown RBP38.11■■■■□ 3.69
FAAP20-207ENST00000420515 BRINP3Q76B58 766 aa38.08■■■■□ 3.69
FAAP20-207ENST00000420515 NUDT16Q96DE0 195 aaKnown RBP38.07■■■■□ 3.68
FAAP20-207ENST00000420515 ESCO1Q5FWF5 840 aa38.05■■■■□ 3.68
FAAP20-207ENST00000420515 KIF1AQ12756 1690 aa38.04■■■■□ 3.68
FAAP20-207ENST00000420515 NHSL1Q5SYE7 1610 aa38.03■■■■□ 3.68
FAAP20-207ENST00000420515 TMF1P82094 1093 aa38.02■■■■□ 3.68
FAAP20-207ENST00000420515 FBXO41Q8TF61 875 aa38.01■■■■□ 3.67
FAAP20-207ENST00000420515 C11orf95C9JLR9 678 aaPredicted RBP38■■■■□ 3.67
FAAP20-207ENST00000420515 DDX17Q92841 729 aaKnown RBP38■■■■□ 3.67
FAAP20-207ENST00000420515 PPIP5K1Q6PFW1 1433 aa37.98■■■■□ 3.67
FAAP20-207ENST00000420515 PMFBP1Q8TBY8 1022 aa37.97■■■■□ 3.67
FAAP20-207ENST00000420515 MYOM1P52179 1685 aa37.97■■■■□ 3.67
FAAP20-207ENST00000420515 PHF8Q9UPP1 1060 aa37.96■■■■□ 3.67
FAAP20-207ENST00000420515 PHLPP1O60346 1717 aa37.96■■■■□ 3.67
FAAP20-207ENST00000420515 AHDC1Q5TGY3 1603 aaPredicted RBP37.95■■■■□ 3.67
FAAP20-207ENST00000420515 CCDC61Q9Y6R9 512 aa37.95■■■■□ 3.67
FAAP20-207ENST00000420515 ATAD2Q6PL18 1390 aa37.94■■■■□ 3.66
FAAP20-207ENST00000420515 SLC24A1O60721 1099 aa37.93■■■■□ 3.66
FAAP20-207ENST00000420515 CABP1Q9NZU7 370 aa37.9■■■■□ 3.66
FAAP20-207ENST00000420515 AKAP12Q02952 1782 aa37.9■■■■□ 3.66
FAAP20-207ENST00000420515 FOXO3O43524 673 aa37.89■■■■□ 3.66
FAAP20-207ENST00000420515 COL16A1Q07092 1604 aaPredicted RBP37.88■■■■□ 3.66
FAAP20-207ENST00000420515 PUS7Q96PZ0 661 aaKnown RBP37.88■■■■□ 3.65
FAAP20-207ENST00000420515 PLEKHG3A1L390 1219 aa37.86■■■■□ 3.65
FAAP20-207ENST00000420515 XPCQ01831 940 aaPredicted RBP37.86■■■■□ 3.65
FAAP20-207ENST00000420515 PXDNQ92626 1479 aa37.86■■■■□ 3.65
FAAP20-207ENST00000420515 POLR3GLQ9BT43 218 aa37.85■■■■□ 3.65
FAAP20-207ENST00000420515 CD163L1Q9NR16 1453 aa37.85■■■■□ 3.65
FAAP20-207ENST00000420515 ACEP12821 1306 aa37.84■■■■□ 3.65
FAAP20-207ENST00000420515 POLR3AO14802 1390 aaPredicted RBP37.84■■■■□ 3.65
FAAP20-207ENST00000420515 SLC12A5Q9H2X9 1139 aa37.84■■■■□ 3.65
FAAP20-207ENST00000420515 TRPM3Q9HCF6 1732 aaPredicted RBP37.83■■■■□ 3.65
FAAP20-207ENST00000420515 KIF7Q2M1P5 1343 aa37.83■■■■□ 3.65
FAAP20-207ENST00000420515 HSPA1LP34931 641 aa37.82■■■■□ 3.65
FAAP20-207ENST00000420515 TMC1Q8TDI8 760 aa37.82■■■■□ 3.65
FAAP20-207ENST00000420515 CDCA8Q53HL2 280 aa37.82■■■■□ 3.64
FAAP20-207ENST00000420515 NGDNQ8NEJ9 315 aaKnown RBP37.81■■■■□ 3.64
FAAP20-207ENST00000420515 MON2Q7Z3U7 1717 aa37.8■■■■□ 3.64
FAAP20-207ENST00000420515 NPHP3Q7Z494 1330 aa37.8■■■■□ 3.64
FAAP20-207ENST00000420515 SOS2Q07890 1332 aaPredicted RBP37.77■■■■□ 3.64
FAAP20-207ENST00000420515 WASHC2AQ641Q2 1341 aa37.77■■■■□ 3.64
FAAP20-207ENST00000420515 CPSF1Q10570 1443 aaKnown RBP37.76■■■■□ 3.64
FAAP20-207ENST00000420515 NRKQ7Z2Y5 1582 aa37.76■■■■□ 3.64
FAAP20-207ENST00000420515 CCDC7Q96M83 1385 aa37.75■■■■□ 3.63
FAAP20-207ENST00000420515 KRT28Q7Z3Y7 464 aa37.74■■■■□ 3.63
FAAP20-207ENST00000420515 A0A1W2PP64 1363 aa37.73■■■■□ 3.63
FAAP20-207ENST00000420515 PSME1Q06323 249 aa37.73■■■■□ 3.63
FAAP20-207ENST00000420515 ILDR1Q86SU0 546 aaPredicted RBP37.73■■■■□ 3.63
FAAP20-207ENST00000420515 NINLQ9Y2I6 1382 aa37.72■■■■□ 3.63
FAAP20-207ENST00000420515 USP6P35125 1406 aa37.71■■■■□ 3.63
FAAP20-207ENST00000420515 ALS2Q96Q42 1657 aa37.71■■■■□ 3.63
FAAP20-207ENST00000420515 ANKRD36BQ8N2N9 1353 aa37.66■■■■□ 3.62
FAAP20-207ENST00000420515 SSH2Q76I76 1423 aa37.66■■■■□ 3.62
FAAP20-207ENST00000420515 KTN1Q86UP2 1357 aaKnown RBP37.65■■■■□ 3.62
FAAP20-207ENST00000420515 SHPRHQ149N8 1683 aa37.63■■■■□ 3.61
FAAP20-207ENST00000420515 TNS3Q68CZ2 1445 aa37.63■■■■□ 3.61
FAAP20-207ENST00000420515 SBNO1A3KN83 1393 aa37.62■■■■□ 3.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms