RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 PRAM1Q96QH2 718 aa16.95■□□□□ 0.3
ATG4B-207ENST00000415107 CARD11Q9BXL7 1154 aa16.95■□□□□ 0.3
ATG4B-207ENST00000415107 QRICH2Q9H0J4 1663 aa16.94■□□□□ 0.3
ATG4B-207ENST00000415107 FMN2Q9NZ56 1722 aa16.93■□□□□ 0.3
ATG4B-207ENST00000415107 TOM1O60784 492 aa16.93■□□□□ 0.3
ATG4B-207ENST00000415107 WAPLQ7Z5K2 1190 aa16.93■□□□□ 0.3
ATG4B-207ENST00000415107 MST1RQ04912 1400 aa16.93■□□□□ 0.3
ATG4B-207ENST00000415107 CENPJQ9HC77 1338 aaPredicted RBP16.93■□□□□ 0.3
ATG4B-207ENST00000415107 POGKQ9P215 609 aa16.92■□□□□ 0.3
ATG4B-207ENST00000415107 RBM33Q96EV2 1170 aaKnown RBP16.91■□□□□ 0.3
ATG4B-207ENST00000415107 ANKARQ7Z5J8 1434 aa16.9■□□□□ 0.3
ATG4B-207ENST00000415107 C14orf37Q86TY3 774 aa16.9■□□□□ 0.3
ATG4B-207ENST00000415107 ATF3P18847 181 aa16.89■□□□□ 0.29
ATG4B-207ENST00000415107 FBXO41Q8TF61 875 aa16.89■□□□□ 0.29
ATG4B-207ENST00000415107 TULP4Q9NRJ4 1543 aa16.89■□□□□ 0.29
ATG4B-207ENST00000415107 USP47Q96K76 1375 aa16.89■□□□□ 0.29
ATG4B-207ENST00000415107 SLC24A1O60721 1099 aa16.88■□□□□ 0.29
ATG4B-207ENST00000415107 C1orf167Q5SNV9 1468 aa16.87■□□□□ 0.29
ATG4B-207ENST00000415107 UBAP1LF5GYI3 381 aa16.87■□□□□ 0.29
ATG4B-207ENST00000415107 USP32Q8NFA0 1604 aa16.86■□□□□ 0.29
ATG4B-207ENST00000415107 SLAIN2Q9P270 581 aa16.86■□□□□ 0.29
ATG4B-207ENST00000415107 ROBO1Q9Y6N7 1651 aa16.85■□□□□ 0.29
ATG4B-207ENST00000415107 WASLO00401 505 aaPredicted RBP16.85■□□□□ 0.29
ATG4B-207ENST00000415107 ATP7BP35670 1465 aa16.85■□□□□ 0.29
ATG4B-207ENST00000415107 AHDC1Q5TGY3 1603 aaPredicted RBP16.84■□□□□ 0.29
ATG4B-207ENST00000415107 KIF1AQ12756 1690 aa16.84■□□□□ 0.29
ATG4B-207ENST00000415107 TOPAZ1Q8N9V7 1692 aa16.84■□□□□ 0.29
ATG4B-207ENST00000415107 ITSN1Q15811 1721 aa16.84■□□□□ 0.29
ATG4B-207ENST00000415107 ZEB1P37275 1124 aaPredicted RBP16.83■□□□□ 0.28
ATG4B-207ENST00000415107 SAFB2Q14151 953 aaKnown RBP eCLIP16.83■□□□□ 0.28
ATG4B-207ENST00000415107 MINK1Q8N4C8 1332 aaPredicted RBP16.83■□□□□ 0.28
ATG4B-207ENST00000415107 TESK2Q96S53 571 aa16.83■□□□□ 0.28
ATG4B-207ENST00000415107 NHSL1Q5SYE7 1610 aa16.82■□□□□ 0.28
ATG4B-207ENST00000415107 PUS7Q96PZ0 661 aaKnown RBP16.82■□□□□ 0.28
ATG4B-207ENST00000415107 EVC2Q86UK5 1308 aa16.81■□□□□ 0.28
ATG4B-207ENST00000415107 ST20-MTHFSA0A0A6YYL1 179 aa16.81■□□□□ 0.28
ATG4B-207ENST00000415107 BRINP3Q76B58 766 aa16.8■□□□□ 0.28
ATG4B-207ENST00000415107 EIF4G2P78344 907 aaKnown RBP eCLIP16.79■□□□□ 0.28
ATG4B-207ENST00000415107 HIRIP3Q9BW71 556 aaPredicted RBP16.79■□□□□ 0.28
ATG4B-207ENST00000415107 ATAD2Q6PL18 1390 aa16.78■□□□□ 0.28
ATG4B-207ENST00000415107 PRR36Q9H6K5 1346 aa16.78■□□□□ 0.28
ATG4B-207ENST00000415107 CDK19Q9BWU1 502 aa16.77■□□□□ 0.28
ATG4B-207ENST00000415107 RGPD8O14715 1765 aaPredicted RBP16.77■□□□□ 0.27
ATG4B-207ENST00000415107 COL16A1Q07092 1604 aaPredicted RBP16.75■□□□□ 0.27
ATG4B-207ENST00000415107 CCDC61Q9Y6R9 512 aa16.75■□□□□ 0.27
ATG4B-207ENST00000415107 POLR3AO14802 1390 aaPredicted RBP16.75■□□□□ 0.27
ATG4B-207ENST00000415107 NINLQ9Y2I6 1382 aa16.75■□□□□ 0.27
ATG4B-207ENST00000415107 NUDT16Q96DE0 195 aaKnown RBP16.74■□□□□ 0.27
ATG4B-207ENST00000415107 PLEKHG3A1L390 1219 aa16.73■□□□□ 0.27
ATG4B-207ENST00000415107 PIP4K2BP78356 416 aa16.73■□□□□ 0.27
ATG4B-207ENST00000415107 TMF1P82094 1093 aa16.73■□□□□ 0.27
ATG4B-207ENST00000415107 ORAI2Q96SN7 254 aa16.73■□□□□ 0.27
ATG4B-207ENST00000415107 PXDNQ92626 1479 aa16.73■□□□□ 0.27
ATG4B-207ENST00000415107 SOS2Q07890 1332 aaPredicted RBP16.72■□□□□ 0.27
ATG4B-207ENST00000415107 NPHP3Q7Z494 1330 aa16.72■□□□□ 0.27
ATG4B-207ENST00000415107 HSPA5P11021 654 aaKnown RBP16.72■□□□□ 0.27
ATG4B-207ENST00000415107 SRPK2P78362 688 aaKnown RBP16.72■□□□□ 0.27
ATG4B-207ENST00000415107 CDCA8Q53HL2 280 aa16.72■□□□□ 0.27
ATG4B-207ENST00000415107 ESCO1Q5FWF5 840 aa16.72■□□□□ 0.27
ATG4B-207ENST00000415107 PHF8Q9UPP1 1060 aa16.72■□□□□ 0.27
ATG4B-207ENST00000415107 PHLPP1O60346 1717 aa16.72■□□□□ 0.27
ATG4B-207ENST00000415107 DISP3Q9P2K9 1392 aa16.72■□□□□ 0.27
ATG4B-207ENST00000415107 PPIP5K1Q6PFW1 1433 aa16.71■□□□□ 0.27
ATG4B-207ENST00000415107 BRD4O60885 1362 aaPredicted RBP16.71■□□□□ 0.27
ATG4B-207ENST00000415107 CABP2Q9NPB3 220 aa16.7■□□□□ 0.26
ATG4B-207ENST00000415107 NUTM2FA1L443 756 aa16.69■□□□□ 0.26
ATG4B-207ENST00000415107 SCAF1Q9H7N4 1312 aaKnown RBP16.69■□□□□ 0.26
ATG4B-207ENST00000415107 TRPM3Q9HCF6 1732 aaPredicted RBP16.68■□□□□ 0.26
ATG4B-207ENST00000415107 SBNO1A3KN83 1393 aa16.68■□□□□ 0.26
ATG4B-207ENST00000415107 CPSF1Q10570 1443 aaKnown RBP16.68■□□□□ 0.26
ATG4B-207ENST00000415107 AKAP12Q02952 1782 aa16.67■□□□□ 0.26
ATG4B-207ENST00000415107 SHPRHQ149N8 1683 aa16.67■□□□□ 0.26
ATG4B-207ENST00000415107 MYOM1P52179 1685 aa16.66■□□□□ 0.26
ATG4B-207ENST00000415107 HSPA1LP34931 641 aa16.66■□□□□ 0.26
ATG4B-207ENST00000415107 ILDR1Q86SU0 546 aaPredicted RBP16.66■□□□□ 0.26
ATG4B-207ENST00000415107 CD163L1Q9NR16 1453 aa16.66■□□□□ 0.26
ATG4B-207ENST00000415107 MON2Q7Z3U7 1717 aa16.65■□□□□ 0.26
ATG4B-207ENST00000415107 NRKQ7Z2Y5 1582 aa16.65■□□□□ 0.26
ATG4B-207ENST00000415107 SSH2Q76I76 1423 aa16.65■□□□□ 0.26
ATG4B-207ENST00000415107 COL22A1Q8NFW1 1626 aaPredicted RBP16.65■□□□□ 0.26
ATG4B-207ENST00000415107 USP6P35125 1406 aa16.64■□□□□ 0.25
ATG4B-207ENST00000415107 FOXO3O43524 673 aa16.64■□□□□ 0.25
ATG4B-207ENST00000415107 ALS2Q96Q42 1657 aa16.64■□□□□ 0.25
ATG4B-207ENST00000415107 ACEP12821 1306 aa16.64■□□□□ 0.25
ATG4B-207ENST00000415107 JCADQ9P266 1359 aa16.64■□□□□ 0.25
ATG4B-207ENST00000415107 TNS3Q68CZ2 1445 aa16.63■□□□□ 0.25
ATG4B-207ENST00000415107 LRRC59Q96AG4 307 aaKnown RBP16.63■□□□□ 0.25
ATG4B-207ENST00000415107 CABP1Q9NZU7 370 aa16.63■□□□□ 0.25
ATG4B-207ENST00000415107 PSME1Q06323 249 aa16.62■□□□□ 0.25
ATG4B-207ENST00000415107 NGDNQ8NEJ9 315 aaKnown RBP16.62■□□□□ 0.25
ATG4B-207ENST00000415107 PMFBP1Q8TBY8 1022 aa16.62■□□□□ 0.25
ATG4B-207ENST00000415107 ZNF692Q9BU19 519 aaPredicted RBP16.62■□□□□ 0.25
ATG4B-207ENST00000415107 MED1Q15648 1581 aaPredicted RBP16.62■□□□□ 0.25
ATG4B-207ENST00000415107 ANKRD36BQ8N2N9 1353 aa16.62■□□□□ 0.25
ATG4B-207ENST00000415107 SPATA31A3Q5VYP0 1347 aa16.61■□□□□ 0.25
ATG4B-207ENST00000415107 ARHGEF10O15013 1369 aa16.61■□□□□ 0.25
ATG4B-207ENST00000415107 KRT28Q7Z3Y7 464 aa16.6■□□□□ 0.25
ATG4B-207ENST00000415107 PNPLA6Q8IY17 1366 aa16.6■□□□□ 0.25
ATG4B-207ENST00000415107 USP54Q70EL1 1684 aa16.59■□□□□ 0.25
ATG4B-207ENST00000415107 DDX17Q92841 729 aaKnown RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms