RNA–Protein interactions for RNA: ENST00000414664.5

CPNE1-207, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-207ENST00000414664 POGKQ9P215 609 aa36.36■■■■□ 3.41
CPNE1-207ENST00000414664 TONSLQ96HA7 1378 aa36.34■■■■□ 3.41
CPNE1-207ENST00000414664 CDC42BPGQ6DT37 1551 aa36.32■■■■□ 3.4
CPNE1-207ENST00000414664 BRINP3Q76B58 766 aa36.31■■■■□ 3.4
CPNE1-207ENST00000414664 C1orf167Q5SNV9 1468 aa36.29■■■■□ 3.4
CPNE1-207ENST00000414664 SAFB2Q14151 953 aaKnown RBP eCLIP36.28■■■■□ 3.43e-13■□□□□ 9.1
CPNE1-207ENST00000414664 NBPF1Q3BBV0 1214 aa36.27■■■■□ 3.4
CPNE1-207ENST00000414664 CLSPNQ9HAW4 1339 aa36.25■■■■□ 3.39
CPNE1-207ENST00000414664 PHLPP1O60346 1717 aa36.24■■■■□ 3.39
CPNE1-207ENST00000414664 AHDC1Q5TGY3 1603 aaPredicted RBP36.2■■■■□ 3.39
CPNE1-207ENST00000414664 ARHGEF28Q8N1W1 1705 aaKnown RBP36.18■■■■□ 3.38
CPNE1-207ENST00000414664 TRPM1Q7Z4N2 1603 aa36.17■■■■□ 3.38
CPNE1-207ENST00000414664 ORAI2Q96SN7 254 aa36.17■■■■□ 3.38
CPNE1-207ENST00000414664 FMN2Q9NZ56 1722 aa36.15■■■■□ 3.38
CPNE1-207ENST00000414664 ESCO1Q5FWF5 840 aa36.15■■■■□ 3.38
CPNE1-207ENST00000414664 MINK1Q8N4C8 1332 aaPredicted RBP36.14■■■■□ 3.38
CPNE1-207ENST00000414664 NUTM2FA1L443 756 aa36.14■■■■□ 3.38
CPNE1-207ENST00000414664 NBPF8Q3BBV2 869 aa36.14■■■■□ 3.38
CPNE1-207ENST00000414664 ROCK2O75116 1388 aaKnown RBP36.14■■■■□ 3.38
CPNE1-207ENST00000414664 ADGRB2O60241 1585 aa36.13■■■■□ 3.37
CPNE1-207ENST00000414664 COL16A1Q07092 1604 aaPredicted RBP36.12■■■■□ 3.37
CPNE1-207ENST00000414664 CCER1Q8TC90 406 aaPredicted RBP36.11■■■■□ 3.37
CPNE1-207ENST00000414664 HIRIP3Q9BW71 556 aaPredicted RBP36.11■■■■□ 3.37
CPNE1-207ENST00000414664 NHSL1Q5SYE7 1610 aa36.11■■■■□ 3.37
CPNE1-207ENST00000414664 JCADQ9P266 1359 aa36.1■■■■□ 3.37
CPNE1-207ENST00000414664 EIF3AQ14152 1382 aaKnown RBP36.08■■■■□ 3.37
CPNE1-207ENST00000414664 TIMELESSQ9UNS1 1208 aa36.08■■■■□ 3.37
CPNE1-207ENST00000414664 WASLO00401 505 aaPredicted RBP36.07■■■■□ 3.36
CPNE1-207ENST00000414664 DDX17Q92841 729 aaKnown RBP36.05■■■■□ 3.36
CPNE1-207ENST00000414664 LRRC59Q96AG4 307 aaKnown RBP36.05■■■■□ 3.36
CPNE1-207ENST00000414664 CENPJQ9HC77 1338 aaPredicted RBP36.05■■■■□ 3.36
CPNE1-207ENST00000414664 ANKARQ7Z5J8 1434 aa36.04■■■■□ 3.36
CPNE1-207ENST00000414664 NPHP3Q7Z494 1330 aa36.04■■■■□ 3.36
CPNE1-207ENST00000414664 GPRASP1Q5JY77 1395 aa36.03■■■■□ 3.36
CPNE1-207ENST00000414664 DISP3Q9P2K9 1392 aa36.01■■■■□ 3.35
CPNE1-207ENST00000414664 MED1Q15648 1581 aaPredicted RBP36■■■■□ 3.35
CPNE1-207ENST00000414664 SOS2Q07890 1332 aaPredicted RBP36■■■■□ 3.35
CPNE1-207ENST00000414664 RALGAPBQ86X10 1494 aa35.99■■■■□ 3.35
CPNE1-207ENST00000414664 FOXO3O43524 673 aa35.99■■■■□ 3.35
CPNE1-207ENST00000414664 CARD11Q9BXL7 1154 aa35.99■■■■□ 3.35
CPNE1-207ENST00000414664 PHF8Q9UPP1 1060 aa35.99■■■■□ 3.35
CPNE1-207ENST00000414664 KIF1AQ12756 1690 aa35.98■■■■□ 3.35
CPNE1-207ENST00000414664 TULP4Q9NRJ4 1543 aa35.97■■■■□ 3.35
CPNE1-207ENST00000414664 RGPD8O14715 1765 aaPredicted RBP35.97■■■■□ 3.35
CPNE1-207ENST00000414664 SPATA31A6Q5VVP1 1343 aa35.96■■■■□ 3.35
CPNE1-207ENST00000414664 CDK19Q9BWU1 502 aa35.95■■■■□ 3.35
CPNE1-207ENST00000414664 SHPRHQ149N8 1683 aa35.94■■■■□ 3.34
CPNE1-207ENST00000414664 USP32Q8NFA0 1604 aa35.93■■■■□ 3.34
CPNE1-207ENST00000414664 QRICH2Q9H0J4 1663 aa35.91■■■■□ 3.34
CPNE1-207ENST00000414664 PRR36Q9H6K5 1346 aa35.9■■■■□ 3.34
CPNE1-207ENST00000414664 NUDT16Q96DE0 195 aaKnown RBP35.89■■■■□ 3.34
CPNE1-207ENST00000414664 PHF23Q9BUL5 403 aaPredicted RBP35.88■■■■□ 3.33
CPNE1-207ENST00000414664 PXDNQ92626 1479 aa35.87■■■■□ 3.33
CPNE1-207ENST00000414664 XPCQ01831 940 aaPredicted RBP35.87■■■■□ 3.33
CPNE1-207ENST00000414664 PSME1Q06323 249 aa35.87■■■■□ 3.33
CPNE1-207ENST00000414664 PMFBP1Q8TBY8 1022 aa35.87■■■■□ 3.33
CPNE1-207ENST00000414664 KRT28Q7Z3Y7 464 aa35.86■■■■□ 3.33
CPNE1-207ENST00000414664 PNPLA6Q8IY17 1366 aa35.86■■■■□ 3.33
CPNE1-207ENST00000414664 SRPK2P78362 688 aaKnown RBP35.85■■■■□ 3.33
CPNE1-207ENST00000414664 CCDC61Q9Y6R9 512 aa35.83■■■■□ 3.33
CPNE1-207ENST00000414664 ATP7BP35670 1465 aa35.83■■■■□ 3.33
CPNE1-207ENST00000414664 EVC2Q86UK5 1308 aa35.83■■■■□ 3.33
CPNE1-207ENST00000414664 ITSN1Q15811 1721 aa35.82■■■■□ 3.32
CPNE1-207ENST00000414664 NGDNQ8NEJ9 315 aaKnown RBP35.8■■■■□ 3.32
CPNE1-207ENST00000414664 NUTM2BA6NNL0 878 aaPredicted RBP35.79■■■■□ 3.32
CPNE1-207ENST00000414664 NUTM2EB1AL46 878 aaPredicted RBP35.79■■■■□ 3.32
CPNE1-207ENST00000414664 NUTM2AQ8IVF1 878 aaPredicted RBP35.79■■■■□ 3.32
CPNE1-207ENST00000414664 MEX3CQ5U5Q3 659 aaKnown RBP35.78■■■■□ 3.32
CPNE1-207ENST00000414664 CABP2Q9NPB3 220 aa35.77■■■■□ 3.32
CPNE1-207ENST00000414664 SPATA31A3Q5VYP0 1347 aa35.77■■■■□ 3.32
CPNE1-207ENST00000414664 SBNO2Q9Y2G9 1366 aa35.76■■■■□ 3.32
CPNE1-207ENST00000414664 SBNO1A3KN83 1393 aa35.75■■■■□ 3.31
CPNE1-207ENST00000414664 LRP6O75581 1613 aa35.74■■■■□ 3.31
CPNE1-207ENST00000414664 PLEKHG3A1L390 1219 aa35.73■■■■□ 3.31
CPNE1-207ENST00000414664 COL22A1Q8NFW1 1626 aaPredicted RBP35.71■■■■□ 3.31
CPNE1-207ENST00000414664 TOPAZ1Q8N9V7 1692 aa35.71■■■■□ 3.31
CPNE1-207ENST00000414664 TNS3Q68CZ2 1445 aa35.7■■■■□ 3.31
CPNE1-207ENST00000414664 SLC24A1O60721 1099 aa35.69■■■■□ 3.3
CPNE1-207ENST00000414664 PPIP5K1Q6PFW1 1433 aa35.67■■■■□ 3.3
CPNE1-207ENST00000414664 ACEP12821 1306 aa35.67■■■■□ 3.3
CPNE1-207ENST00000414664 POLR3AO14802 1390 aaPredicted RBP35.66■■■■□ 3.3
CPNE1-207ENST00000414664 ARHGEF10O15013 1369 aa35.66■■■■□ 3.3
CPNE1-207ENST00000414664 ST20-MTHFSA0A0A6YYL1 179 aa35.66■■■■□ 3.3
CPNE1-207ENST00000414664 LMOD2Q6P5Q4 547 aa35.66■■■■□ 3.3
CPNE1-207ENST00000414664 ATAD2Q6PL18 1390 aa35.63■■■■□ 3.29
CPNE1-207ENST00000414664 USP47Q96K76 1375 aa35.63■■■■□ 3.29
CPNE1-207ENST00000414664 CABP1Q9NZU7 370 aa35.62■■■■□ 3.29
CPNE1-207ENST00000414664 TRPM3Q9HCF6 1732 aaPredicted RBP35.61■■■■□ 3.29
CPNE1-207ENST00000414664 PAK3O75914 559 aaPredicted RBP35.61■■■■□ 3.29
CPNE1-207ENST00000414664 RGS17Q9UGC6 210 aaPredicted RBP35.61■■■■□ 3.29
CPNE1-207ENST00000414664 ADAMTS2O95450 1211 aa35.6■■■■□ 3.29
CPNE1-207ENST00000414664 C8orf37Q96NL8 207 aa35.57■■■■□ 3.28
CPNE1-207ENST00000414664 TESK2Q96S53 571 aa35.57■■■■□ 3.28
CPNE1-207ENST00000414664 ZNF772Q68DY9 489 aaPredicted RBP35.56■■■■□ 3.28
CPNE1-207ENST00000414664 PUS7Q96PZ0 661 aaKnown RBP35.56■■■■□ 3.28
CPNE1-207ENST00000414664 HAP1P54257 671 aaPredicted RBP35.55■■■■□ 3.28
CPNE1-207ENST00000414664 ILDR2Q71H61 639 aa35.54■■■■□ 3.28
CPNE1-207ENST00000414664 NGLY1Q96IV0 654 aa35.54■■■■□ 3.28
CPNE1-207ENST00000414664 BRD4O60885 1362 aaPredicted RBP35.53■■■■□ 3.28
CPNE1-207ENST00000414664 ALS2Q96Q42 1657 aa35.53■■■■□ 3.28
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms