RNA–Protein interactions for RNA: ENST00000412585.6

HLA-B-249, Transcript of major histocompatibility complex, class I, B, humanhuman

APPRIS P1 BASIC

Gene HLA-B, Length 1,547 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-249ENST00000412585 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.26■■□□□ 1.31
HLA-B-249ENST00000412585 CENPBP07199 599 aaPredicted RBP23.26■■□□□ 1.31
HLA-B-249ENST00000412585 SAFB2Q14151 953 aaKnown RBP eCLIP23.26■■□□□ 1.31
HLA-B-249ENST00000412585 WAPLQ7Z5K2 1190 aa23.26■■□□□ 1.31
HLA-B-249ENST00000412585 XIRP1Q702N8 1843 aaKnown RBP23.26■■□□□ 1.31
HLA-B-249ENST00000412585 SLC24A1O60721 1099 aa23.24■■□□□ 1.31
HLA-B-249ENST00000412585 LTBP4Q8N2S1 1624 aa23.24■■□□□ 1.31
HLA-B-249ENST00000412585 LRRC7Q96NW7 1537 aa23.23■■□□□ 1.31
HLA-B-249ENST00000412585 NCOA3Q9Y6Q9 1424 aa23.23■■□□□ 1.31
HLA-B-249ENST00000412585 C14orf37Q86TY3 774 aa23.23■■□□□ 1.31
HLA-B-249ENST00000412585 ADGRL3Q9HAR2 1447 aa23.22■■□□□ 1.31
HLA-B-249ENST00000412585 TMEM94Q12767 1356 aa23.22■■□□□ 1.31
HLA-B-249ENST00000412585 MINK1Q8N4C8 1332 aaPredicted RBP23.21■■□□□ 1.31
HLA-B-249ENST00000412585 CDC42BPGQ6DT37 1551 aa23.21■■□□□ 1.31
HLA-B-249ENST00000412585 HIRIP3Q9BW71 556 aaPredicted RBP23.2■■□□□ 1.3
HLA-B-249ENST00000412585 TESK2Q96S53 571 aa23.18■■□□□ 1.3
HLA-B-249ENST00000412585 TULP4Q9NRJ4 1543 aa23.18■■□□□ 1.3
HLA-B-249ENST00000412585 TMF1P82094 1093 aa23.18■■□□□ 1.3
HLA-B-249ENST00000412585 EVC2Q86UK5 1308 aa23.17■■□□□ 1.3
HLA-B-249ENST00000412585 RBM33Q96EV2 1170 aaKnown RBP23.17■■□□□ 1.3
HLA-B-249ENST00000412585 FMN2Q9NZ56 1722 aa23.16■■□□□ 1.3
HLA-B-249ENST00000412585 MSH6P52701 1360 aa23.16■■□□□ 1.3
HLA-B-249ENST00000412585 DCCP43146 1447 aa23.14■■□□□ 1.3
HLA-B-249ENST00000412585 CDCA8Q53HL2 280 aa23.13■■□□□ 1.29
HLA-B-249ENST00000412585 ITSN1Q15811 1721 aa23.13■■□□□ 1.29
HLA-B-249ENST00000412585 DISP3Q9P2K9 1392 aa23.12■■□□□ 1.29
HLA-B-249ENST00000412585 C19orf44Q9H6X5 657 aa23.12■■□□□ 1.29
HLA-B-249ENST00000412585 WASLO00401 505 aaPredicted RBP23.11■■□□□ 1.29
HLA-B-249ENST00000412585 SRPK2P78362 688 aaKnown RBP23.1■■□□□ 1.29
HLA-B-249ENST00000412585 RGPD8O14715 1765 aaPredicted RBP23.08■■□□□ 1.29
HLA-B-249ENST00000412585 IQSEC2Q5JU85 1478 aa23.08■■□□□ 1.28
HLA-B-249ENST00000412585 ATF3P18847 181 aa23.08■■□□□ 1.28
HLA-B-249ENST00000412585 CDK19Q9BWU1 502 aa23.08■■□□□ 1.28
HLA-B-249ENST00000412585 CADPS2Q86UW7 1296 aa23.07■■□□□ 1.28
HLA-B-249ENST00000412585 ATAD2Q6PL18 1390 aa23.06■■□□□ 1.28
HLA-B-249ENST00000412585 TOPAZ1Q8N9V7 1692 aa23.06■■□□□ 1.28
HLA-B-249ENST00000412585 ANKARQ7Z5J8 1434 aa23.06■■□□□ 1.28
HLA-B-249ENST00000412585 USP32Q8NFA0 1604 aa23.06■■□□□ 1.28
HLA-B-249ENST00000412585 PUS7Q96PZ0 661 aaKnown RBP23.05■■□□□ 1.28
HLA-B-249ENST00000412585 POLR3GLQ9BT43 218 aa23.05■■□□□ 1.28
HLA-B-249ENST00000412585 ATP7BP35670 1465 aa23.05■■□□□ 1.28
HLA-B-249ENST00000412585 MYOM1P52179 1685 aa23.04■■□□□ 1.28
HLA-B-249ENST00000412585 CABP2Q9NPB3 220 aa23.04■■□□□ 1.28
HLA-B-249ENST00000412585 KIF7Q2M1P5 1343 aa23.03■■□□□ 1.28
HLA-B-249ENST00000412585 CCDC7Q96M83 1385 aa23.03■■□□□ 1.28
HLA-B-249ENST00000412585 MST1RQ04912 1400 aa23■■□□□ 1.27
HLA-B-249ENST00000412585 NINLQ9Y2I6 1382 aa23■■□□□ 1.27
HLA-B-249ENST00000412585 WASHC2AQ641Q2 1341 aa23■■□□□ 1.27
HLA-B-249ENST00000412585 NUTM2FA1L443 756 aa23■■□□□ 1.27
HLA-B-249ENST00000412585 C11orf95C9JLR9 678 aaPredicted RBP23■■□□□ 1.27
HLA-B-249ENST00000412585 KIF1AQ12756 1690 aa23■■□□□ 1.27
HLA-B-249ENST00000412585 NUDT16Q96DE0 195 aaKnown RBP22.99■■□□□ 1.27
HLA-B-249ENST00000412585 C1orf167Q5SNV9 1468 aa22.97■■□□□ 1.27
HLA-B-249ENST00000412585 PPIP5K1Q6PFW1 1433 aa22.97■■□□□ 1.27
HLA-B-249ENST00000412585 PRR36Q9H6K5 1346 aa22.97■■□□□ 1.27
HLA-B-249ENST00000412585 CERKQ8TCT0 537 aa22.97■■□□□ 1.27
HLA-B-249ENST00000412585 CCDC61Q9Y6R9 512 aa22.97■■□□□ 1.27
HLA-B-249ENST00000412585 TMC1Q8TDI8 760 aa22.96■■□□□ 1.27
HLA-B-249ENST00000412585 AKAP12Q02952 1782 aa22.95■■□□□ 1.26
HLA-B-249ENST00000412585 TOM1O60784 492 aa22.92■■□□□ 1.26
HLA-B-249ENST00000412585 ESCO1Q5FWF5 840 aa22.92■■□□□ 1.26
HLA-B-249ENST00000412585 DDX10Q13206 875 aaKnown RBP22.91■■□□□ 1.26
HLA-B-249ENST00000412585 SLAIN2Q9P270 581 aa22.91■■□□□ 1.26
HLA-B-249ENST00000412585 MON2Q7Z3U7 1717 aa22.9■■□□□ 1.26
HLA-B-249ENST00000412585 CABP1Q9NZU7 370 aa22.9■■□□□ 1.26
HLA-B-249ENST00000412585 ROBO1Q9Y6N7 1651 aa22.89■■□□□ 1.26
HLA-B-249ENST00000412585 PHF8Q9UPP1 1060 aa22.89■■□□□ 1.26
HLA-B-249ENST00000412585 GTF3C3Q9Y5Q9 886 aa22.89■■□□□ 1.26
HLA-B-249ENST00000412585 TERF2IPQ9NYB0 399 aa22.88■■□□□ 1.25
HLA-B-249ENST00000412585 ANKRD36BQ8N2N9 1353 aa22.88■■□□□ 1.25
HLA-B-249ENST00000412585 SLC12A5Q9H2X9 1139 aa22.87■■□□□ 1.25
HLA-B-249ENST00000412585 PLEKHG3A1L390 1219 aa22.87■■□□□ 1.25
HLA-B-249ENST00000412585 UBAP1LF5GYI3 381 aa22.87■■□□□ 1.25
HLA-B-249ENST00000412585 HDGFL2Q7Z4V5 671 aaPredicted RBP22.87■■□□□ 1.25
HLA-B-249ENST00000412585 YTHDC1Q96MU7 727 aaKnown RBP22.87■■□□□ 1.25
HLA-B-249ENST00000412585 NGDNQ8NEJ9 315 aaKnown RBP22.86■■□□□ 1.25
HLA-B-249ENST00000412585 PMFBP1Q8TBY8 1022 aa22.86■■□□□ 1.25
HLA-B-249ENST00000412585 ORAI2Q96SN7 254 aa22.86■■□□□ 1.25
HLA-B-249ENST00000412585 NHSL1Q5SYE7 1610 aa22.85■■□□□ 1.25
HLA-B-249ENST00000412585 A0A1W2PP64 1363 aa22.85■■□□□ 1.25
HLA-B-249ENST00000412585 POLR3AO14802 1390 aaPredicted RBP22.85■■□□□ 1.25
HLA-B-249ENST00000412585 CD163L1Q9NR16 1453 aa22.84■■□□□ 1.25
HLA-B-249ENST00000412585 ACEP12821 1306 aa22.84■■□□□ 1.25
HLA-B-249ENST00000412585 BRINP3Q76B58 766 aa22.82■■□□□ 1.24
HLA-B-249ENST00000412585 CPSF1Q10570 1443 aaKnown RBP22.82■■□□□ 1.24
HLA-B-249ENST00000412585 NRKQ7Z2Y5 1582 aa22.82■■□□□ 1.24
HLA-B-249ENST00000412585 ZNF692Q9BU19 519 aaPredicted RBP22.82■■□□□ 1.24
HLA-B-249ENST00000412585 KTN1Q86UP2 1357 aaKnown RBP22.82■■□□□ 1.24
HLA-B-249ENST00000412585 NPHP3Q7Z494 1330 aa22.81■■□□□ 1.24
HLA-B-249ENST00000412585 PANK3Q9H999 370 aa22.81■■□□□ 1.24
HLA-B-249ENST00000412585 USP6P35125 1406 aa22.8■■□□□ 1.24
HLA-B-249ENST00000412585 KIF20BQ96Q89 1820 aa22.8■■□□□ 1.24
HLA-B-249ENST00000412585 PIP4K2BP78356 416 aa22.78■■□□□ 1.24
HLA-B-249ENST00000412585 AHDC1Q5TGY3 1603 aaPredicted RBP22.78■■□□□ 1.24
HLA-B-249ENST00000412585 EDC4Q6P2E9 1401 aaKnown RBP22.78■■□□□ 1.24
HLA-B-249ENST00000412585 NSD3Q9BZ95 1437 aa22.78■■□□□ 1.24
HLA-B-249ENST00000412585 FOXO3O43524 673 aa22.77■■□□□ 1.24
HLA-B-249ENST00000412585 PSME1Q06323 249 aa22.77■■□□□ 1.24
HLA-B-249ENST00000412585 TRPM3Q9HCF6 1732 aaPredicted RBP22.77■■□□□ 1.24
HLA-B-249ENST00000412585 BRD4O60885 1362 aaPredicted RBP22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms