RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 GOLGA6L10A0A0M3HER8 536 aa8.85□□□□□ -0.99
PTPN3-203ENST00000412145 STIM1Q13586 685 aa8.85□□□□□ -0.99
PTPN3-203ENST00000412145 SPATA24Q86W54 205 aa8.85□□□□□ -0.99
PTPN3-203ENST00000412145 ARID3AQ99856 593 aa8.85□□□□□ -0.99
PTPN3-203ENST00000412145 APBB1O00213 710 aa8.85□□□□□ -0.99
PTPN3-203ENST00000412145 MAGEC2Q9UBF1 373 aaPredicted RBP8.85□□□□□ -0.99
PTPN3-203ENST00000412145 CBFA2T2O43439 604 aa8.85□□□□□ -0.99
PTPN3-203ENST00000412145 PPM1EQ8WY54 764 aa8.85□□□□□ -0.99
PTPN3-203ENST00000412145 SMC3Q9UQE7 1217 aa8.85□□□□□ -0.99
PTPN3-203ENST00000412145 CCDC91Q7Z6B0 441 aa8.85□□□□□ -0.99
PTPN3-203ENST00000412145 SLC3A2P08195 630 aaKnown RBP8.85□□□□□ -0.99
PTPN3-203ENST00000412145 ZNF396Q96N95 335 aaPredicted RBP8.85□□□□□ -0.99
PTPN3-203ENST00000412145 CT47B1P0C2W7 299 aaPredicted RBP8.84□□□□□ -0.99
PTPN3-203ENST00000412145 HSPA5P11021 654 aaKnown RBP8.84□□□□□ -0.99
PTPN3-203ENST00000412145 PDE4CQ08493 712 aa8.84□□□□□ -0.99
PTPN3-203ENST00000412145 SIN3AQ96ST3 1273 aa8.84□□□□□ -0.99
PTPN3-203ENST00000412145 C1orf141Q5JVX7 400 aa8.84□□□□□ -0.99
PTPN3-203ENST00000412145 FAM13BQ9NYF5 915 aa8.84□□□□□ -0.99
PTPN3-203ENST00000412145 RALYLQ86SE5 291 aaKnown RBP8.84□□□□□ -0.99
PTPN3-203ENST00000412145 KINO60870 393 aaKnown RBP8.83□□□□□ -1
PTPN3-203ENST00000412145 STAMBPO95630 424 aa8.83□□□□□ -1
PTPN3-203ENST00000412145 IFIT2P09913 472 aaKnown RBP8.83□□□□□ -1
PTPN3-203ENST00000412145 NASPP49321 788 aaPredicted RBP8.83□□□□□ -1
PTPN3-203ENST00000412145 HNRNPMP52272 730 aaKnown RBP eCLIP8.83□□□□□ -1
PTPN3-203ENST00000412145 DDX11Q96FC9 970 aa8.83□□□□□ -1
PTPN3-203ENST00000412145 CCDC7Q96M83 1385 aa8.82□□□□□ -1
PTPN3-203ENST00000412145 MIA2Q96PC5 1412 aa8.82□□□□□ -1
PTPN3-203ENST00000412145 CCDC112Q8NEF3 446 aa8.82□□□□□ -1
PTPN3-203ENST00000412145 TTC5Q8N0Z6 440 aa8.82□□□□□ -1
PTPN3-203ENST00000412145 ANO2Q9NQ90 1003 aa8.82□□□□□ -1
PTPN3-203ENST00000412145 ANKRD1Q15327 319 aa8.82□□□□□ -1
PTPN3-203ENST00000412145 AMPHP49418 695 aa8.82□□□□□ -1
PTPN3-203ENST00000412145 CCAR1Q8IX12 1150 aaKnown RBP8.82□□□□□ -1
PTPN3-203ENST00000412145 DDX12PQ92771 950 aa8.82□□□□□ -1
PTPN3-203ENST00000412145 MAP9Q49MG5 647 aa8.81□□□□□ -1
PTPN3-203ENST00000412145 PDE4AP27815 886 aa8.81□□□□□ -1
PTPN3-203ENST00000412145 AXDND1Q5T1B0 1012 aaPredicted RBP8.81□□□□□ -1
PTPN3-203ENST00000412145 NUTM2DQ5VT03 806 aaPredicted RBP8.81□□□□□ -1
PTPN3-203ENST00000412145 NFXL1Q6ZNB6 911 aa8.81□□□□□ -1
PTPN3-203ENST00000412145 CWC22Q9HCG8 908 aaKnown RBP8.81□□□□□ -1
PTPN3-203ENST00000412145 EVC2Q86UK5 1308 aa8.81□□□□□ -1
PTPN3-203ENST00000412145 WASHC2CQ9Y4E1 1318 aa8.81□□□□□ -1
PTPN3-203ENST00000412145 CETN2P41208 172 aa8.81□□□□□ -1
PTPN3-203ENST00000412145 NUP155O75694 1391 aa8.81□□□□□ -1
PTPN3-203ENST00000412145 MICALCLQ6ZW33 695 aa8.81□□□□□ -1
PTPN3-203ENST00000412145 G3BP1Q13283 466 aaKnown RBP eCLIP8.8□□□□□ -1
PTPN3-203ENST00000412145 VPS37DQ86XT2 251 aa8.8□□□□□ -1
PTPN3-203ENST00000412145 AEBP1Q8IUX7 1158 aa8.8□□□□□ -1
PTPN3-203ENST00000412145 C9orf78Q9NZ63 289 aaPredicted RBP8.8□□□□□ -1
PTPN3-203ENST00000412145 CCDC144AA2RUR9 1427 aa8.8□□□□□ -1
PTPN3-203ENST00000412145 ANKRD18BA2A2Z9 1011 aa8.8□□□□□ -1
PTPN3-203ENST00000412145 NUTM2FA1L443 756 aa8.8□□□□□ -1
PTPN3-203ENST00000412145 RRP9O43818 475 aaKnown RBP8.8□□□□□ -1
PTPN3-203ENST00000412145 SLC4A10Q6U841 1118 aa8.8□□□□□ -1
PTPN3-203ENST00000412145 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.8□□□□□ -1
PTPN3-203ENST00000412145 ZNF330Q9Y3S2 320 aaPredicted RBP8.8□□□□□ -1
PTPN3-203ENST00000412145 PKD2Q13563 968 aa8.8□□□□□ -1
PTPN3-203ENST00000412145 SMARCA2P51531 1590 aa8.8□□□□□ -1
PTPN3-203ENST00000412145 RILPL2Q969X0 211 aa8.79□□□□□ -1
PTPN3-203ENST00000412145 CFAP57Q96MR6 1250 aa8.79□□□□□ -1
PTPN3-203ENST00000412145 ERC1Q8IUD2 1116 aa8.79□□□□□ -1
PTPN3-203ENST00000412145 JAKMIP3Q5VZ66 844 aa8.79□□□□□ -1
PTPN3-203ENST00000412145 DZIP1LQ8IYY4 767 aaKnown RBP8.79□□□□□ -1
PTPN3-203ENST00000412145 SEPT11Q9NVA2 429 aaKnown RBP8.79□□□□□ -1
PTPN3-203ENST00000412145 CADPSQ9ULU8 1353 aa8.79□□□□□ -1
PTPN3-203ENST00000412145 CDC45O75419 566 aa8.79□□□□□ -1
PTPN3-203ENST00000412145 RRP1P56182 461 aaKnown RBP8.79□□□□□ -1
PTPN3-203ENST00000412145 SMC2O95347 1197 aa8.79□□□□□ -1
PTPN3-203ENST00000412145 ENOX2Q16206 610 aaKnown RBP8.79□□□□□ -1
PTPN3-203ENST00000412145 ANKRD45Q5TZF3 282 aa8.79□□□□□ -1
PTPN3-203ENST00000412145 CDK5RAP3Q96JB5 506 aa8.79□□□□□ -1
PTPN3-203ENST00000412145 SDF4Q9BRK5 362 aa8.79□□□□□ -1
PTPN3-203ENST00000412145 POTEB2H3BUK9 544 aa8.78□□□□□ -1
PTPN3-203ENST00000412145 CCDC192P0DO97 292 aa8.78□□□□□ -1
PTPN3-203ENST00000412145 NGDNQ8NEJ9 315 aaKnown RBP8.78□□□□□ -1
PTPN3-203ENST00000412145 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.78□□□□□ -1
PTPN3-203ENST00000412145 V9GYY5 206 aaPredicted RBP8.78□□□□□ -1
PTPN3-203ENST00000412145 POTEJP0CG39 1038 aa8.78□□□□□ -1
PTPN3-203ENST00000412145 FAM69CQ0P6D2 419 aa8.78□□□□□ -1
PTPN3-203ENST00000412145 TSPY26PQ9H489 355 aa8.78□□□□□ -1
PTPN3-203ENST00000412145 CNTLNQ9NXG0 1405 aa8.78□□□□□ -1
PTPN3-203ENST00000412145 TEFQ10587 303 aa8.78□□□□□ -1
PTPN3-203ENST00000412145 CCDC181Q5TID7 509 aa8.78□□□□□ -1
PTPN3-203ENST00000412145 COG3Q96JB2 828 aa8.78□□□□□ -1
PTPN3-203ENST00000412145 CDKL5O76039 1030 aa8.78□□□□□ -1
PTPN3-203ENST00000412145 GIMAP7Q8NHV1 300 aa8.78□□□□□ -1
PTPN3-203ENST00000412145 RRBP1Q9P2E9 1410 aaKnown RBP8.78□□□□□ -1
PTPN3-203ENST00000412145 ZFYVE27Q5T4F4 411 aa8.77□□□□□ -1
PTPN3-203ENST00000412145 CLASRPQ8N2M8 674 aaKnown RBP8.77□□□□□ -1
PTPN3-203ENST00000412145 SHTN1A0MZ66 631 aa8.77□□□□□ -1
PTPN3-203ENST00000412145 PPFIBP1Q86W92 1011 aa8.77□□□□□ -1
PTPN3-203ENST00000412145 GNAI1P63096 354 aa8.77□□□□□ -1.01
PTPN3-203ENST00000412145 FOXD1Q16676 465 aa8.77□□□□□ -1.01
PTPN3-203ENST00000412145 HSP90AB3PQ58FF7 597 aa8.77□□□□□ -1.01
PTPN3-203ENST00000412145 CNTROBQ8N137 903 aa8.77□□□□□ -1.01
PTPN3-203ENST00000412145 CCDC88BA6NC98 1476 aa8.77□□□□□ -1.01
PTPN3-203ENST00000412145 LUZP1Q86V48 1076 aa8.77□□□□□ -1.01
PTPN3-203ENST00000412145 TRIM5Q9C035 493 aa8.77□□□□□ -1.01
PTPN3-203ENST00000412145 CUX1P39880 1505 aa8.76□□□□□ -1.01
PTPN3-203ENST00000412145 TSHZ2Q9NRE2 1034 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms