RNA–Protein interactions for RNA: ENST00000411985.5

BRCC3-207, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 688 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-207ENST00000411985 KIF1AQ12756 1690 aa13.45□□□□□ -0.26
BRCC3-207ENST00000411985 NCBP3Q53F19 620 aaKnown RBP13.45□□□□□ -0.26
BRCC3-207ENST00000411985 BRINP3Q76B58 766 aa13.45□□□□□ -0.26
BRCC3-207ENST00000411985 ABCC11Q96J66 1382 aa13.45□□□□□ -0.26
BRCC3-207ENST00000411985 JCADQ9P266 1359 aa13.45□□□□□ -0.26
BRCC3-207ENST00000411985 DLC1Q96QB1 1528 aa13.44□□□□□ -0.26
BRCC3-207ENST00000411985 C1orf167Q5SNV9 1468 aa13.44□□□□□ -0.26
BRCC3-207ENST00000411985 ILDR2Q71H61 639 aa13.44□□□□□ -0.26
BRCC3-207ENST00000411985 C14orf93Q9H972 538 aaKnown RBP13.44□□□□□ -0.26
BRCC3-207ENST00000411985 MARF1Q9Y4F3 1742 aaKnown RBP13.44□□□□□ -0.26
BRCC3-207ENST00000411985 ADGRB2O60241 1585 aa13.43□□□□□ -0.26
BRCC3-207ENST00000411985 TMEM132EQ6IEE7 984 aa13.43□□□□□ -0.26
BRCC3-207ENST00000411985 STK26Q9P289 416 aa13.43□□□□□ -0.26
BRCC3-207ENST00000411985 DHX57Q6P158 1386 aaKnown RBP13.43□□□□□ -0.26
BRCC3-207ENST00000411985 CFAP70Q5T0N1 1121 aa13.42□□□□□ -0.26
BRCC3-207ENST00000411985 RNF216Q9NWF9 866 aaPredicted RBP13.42□□□□□ -0.26
BRCC3-207ENST00000411985 ITSN1Q15811 1721 aa13.42□□□□□ -0.26
BRCC3-207ENST00000411985 DCAF11Q8TEB1 546 aa13.41□□□□□ -0.26
BRCC3-207ENST00000411985 USP32Q8NFA0 1604 aa13.4□□□□□ -0.26
BRCC3-207ENST00000411985 COL22A1Q8NFW1 1626 aaPredicted RBP13.4□□□□□ -0.26
BRCC3-207ENST00000411985 STAC3Q96MF2 364 aa13.4□□□□□ -0.26
BRCC3-207ENST00000411985 PLEKHH1Q9ULM0 1364 aa13.4□□□□□ -0.26
BRCC3-207ENST00000411985 LRP6O75581 1613 aa13.39□□□□□ -0.27
BRCC3-207ENST00000411985 WAPLQ7Z5K2 1190 aa13.39□□□□□ -0.27
BRCC3-207ENST00000411985 KDM2AQ9Y2K7 1162 aa13.39□□□□□ -0.27
BRCC3-207ENST00000411985 SIRT1Q96EB6 747 aa13.38□□□□□ -0.27
BRCC3-207ENST00000411985 TRPM1Q7Z4N2 1603 aa13.38□□□□□ -0.27
BRCC3-207ENST00000411985 SPATA31A6Q5VVP1 1343 aa13.38□□□□□ -0.27
BRCC3-207ENST00000411985 ORAI2Q96SN7 254 aa13.36□□□□□ -0.27
BRCC3-207ENST00000411985 QRICH2Q9H0J4 1663 aa13.36□□□□□ -0.27
BRCC3-207ENST00000411985 DDX17Q92841 729 aaKnown RBP13.35□□□□□ -0.27
BRCC3-207ENST00000411985 ABCA3Q99758 1704 aa13.34□□□□□ -0.27
BRCC3-207ENST00000411985 LRRC59Q96AG4 307 aaKnown RBP13.34□□□□□ -0.27
BRCC3-207ENST00000411985 PRAM1Q96QH2 718 aa13.34□□□□□ -0.27
BRCC3-207ENST00000411985 PXDNQ92626 1479 aa13.34□□□□□ -0.27
BRCC3-207ENST00000411985 ESCO1Q5FWF5 840 aa13.33□□□□□ -0.28
BRCC3-207ENST00000411985 RGS17Q9UGC6 210 aaPredicted RBP13.33□□□□□ -0.28
BRCC3-207ENST00000411985 TOPAZ1Q8N9V7 1692 aa13.33□□□□□ -0.28
BRCC3-207ENST00000411985 SOS2Q07890 1332 aaPredicted RBP13.33□□□□□ -0.28
BRCC3-207ENST00000411985 PNPLA6Q8IY17 1366 aa13.32□□□□□ -0.28
BRCC3-207ENST00000411985 NUTM2FA1L443 756 aa13.32□□□□□ -0.28
BRCC3-207ENST00000411985 SOCS7O14512 581 aa13.32□□□□□ -0.28
BRCC3-207ENST00000411985 TRAK1Q9UPV9 953 aa13.32□□□□□ -0.28
BRCC3-207ENST00000411985 TRPM3Q9HCF6 1732 aaPredicted RBP13.32□□□□□ -0.28
BRCC3-207ENST00000411985 TULP4Q9NRJ4 1543 aa13.31□□□□□ -0.28
BRCC3-207ENST00000411985 TRIM26Q12899 539 aaPredicted RBP13.31□□□□□ -0.28
BRCC3-207ENST00000411985 SAFB2Q14151 953 aaKnown RBP eCLIP13.31□□□□□ -0.285e-6■□□□□ 11
BRCC3-207ENST00000411985 POGKQ9P215 609 aa13.31□□□□□ -0.28
BRCC3-207ENST00000411985 NPHP3Q7Z494 1330 aa13.31□□□□□ -0.28
BRCC3-207ENST00000411985 MEX3CQ5U5Q3 659 aaKnown RBP13.3□□□□□ -0.28
BRCC3-207ENST00000411985 ANKARQ7Z5J8 1434 aa13.3□□□□□ -0.28
BRCC3-207ENST00000411985 ALS2Q96Q42 1657 aa13.29□□□□□ -0.28
BRCC3-207ENST00000411985 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.28□□□□□ -0.28
BRCC3-207ENST00000411985 NUTM2BA6NNL0 878 aaPredicted RBP13.28□□□□□ -0.28
BRCC3-207ENST00000411985 NUTM2EB1AL46 878 aaPredicted RBP13.28□□□□□ -0.28
BRCC3-207ENST00000411985 NUTM2AQ8IVF1 878 aaPredicted RBP13.28□□□□□ -0.28
BRCC3-207ENST00000411985 SIN3AQ96ST3 1273 aa13.28□□□□□ -0.28
BRCC3-207ENST00000411985 EIF3AQ14152 1382 aaKnown RBP13.28□□□□□ -0.28
BRCC3-207ENST00000411985 CRYBG1Q9Y4K1 1723 aa13.27□□□□□ -0.28
BRCC3-207ENST00000411985 FOXO3O43524 673 aa13.27□□□□□ -0.29
BRCC3-207ENST00000411985 NPM3O75607 178 aaKnown RBP13.27□□□□□ -0.29
BRCC3-207ENST00000411985 PLCH1Q4KWH8 1693 aa13.27□□□□□ -0.29
BRCC3-207ENST00000411985 MINK1Q8N4C8 1332 aaPredicted RBP13.26□□□□□ -0.29
BRCC3-207ENST00000411985 L3MBTL2Q969R5 705 aa13.26□□□□□ -0.29
BRCC3-207ENST00000411985 HIRIP3Q9BW71 556 aaPredicted RBP13.26□□□□□ -0.29
BRCC3-207ENST00000411985 DCAF8L1A6NGE4 600 aa13.25□□□□□ -0.29
BRCC3-207ENST00000411985 NEUROD1Q13562 356 aa13.25□□□□□ -0.29
BRCC3-207ENST00000411985 POTEAQ6S8J7 498 aa13.25□□□□□ -0.29
BRCC3-207ENST00000411985 NWD2Q9ULI1 1742 aa13.25□□□□□ -0.29
BRCC3-207ENST00000411985 ATP7BP35670 1465 aa13.24□□□□□ -0.29
BRCC3-207ENST00000411985 XPCQ01831 940 aaPredicted RBP13.24□□□□□ -0.29
BRCC3-207ENST00000411985 ZNF772Q68DY9 489 aaPredicted RBP13.24□□□□□ -0.29
BRCC3-207ENST00000411985 PHF8Q9UPP1 1060 aa13.24□□□□□ -0.29
BRCC3-207ENST00000411985 TNS3Q68CZ2 1445 aa13.23□□□□□ -0.29
BRCC3-207ENST00000411985 WASLO00401 505 aaPredicted RBP13.23□□□□□ -0.29
BRCC3-207ENST00000411985 KCNA4P22459 653 aa13.23□□□□□ -0.29
BRCC3-207ENST00000411985 NBPF1Q3BBV0 1214 aa13.23□□□□□ -0.29
BRCC3-207ENST00000411985 PHRF1Q9P1Y6 1649 aaKnown RBP13.22□□□□□ -0.29
BRCC3-207ENST00000411985 AKAP12Q02952 1782 aa13.22□□□□□ -0.29
BRCC3-207ENST00000411985 AFF2P51816 1311 aa13.21□□□□□ -0.29
BRCC3-207ENST00000411985 SPATA31A3Q5VYP0 1347 aa13.21□□□□□ -0.29
BRCC3-207ENST00000411985 PRR36Q9H6K5 1346 aa13.21□□□□□ -0.29
BRCC3-207ENST00000411985 KRT28Q7Z3Y7 464 aa13.21□□□□□ -0.29
BRCC3-207ENST00000411985 C8orf37Q96NL8 207 aa13.21□□□□□ -0.29
BRCC3-207ENST00000411985 ADAMTS2O95450 1211 aa13.2□□□□□ -0.3
BRCC3-207ENST00000411985 PSME1Q06323 249 aa13.2□□□□□ -0.3
BRCC3-207ENST00000411985 PMFBP1Q8TBY8 1022 aa13.2□□□□□ -0.3
BRCC3-207ENST00000411985 SBNO1A3KN83 1393 aa13.2□□□□□ -0.3
BRCC3-207ENST00000411985 NRAPQ86VF7 1730 aa13.19□□□□□ -0.3
BRCC3-207ENST00000411985 ROCK2O75116 1388 aaKnown RBP13.19□□□□□ -0.3
BRCC3-207ENST00000411985 TONSLQ96HA7 1378 aa13.19□□□□□ -0.3
BRCC3-207ENST00000411985 CENPJQ9HC77 1338 aaPredicted RBP13.18□□□□□ -0.3
BRCC3-207ENST00000411985 ARHGEF10O15013 1369 aa13.18□□□□□ -0.3
BRCC3-207ENST00000411985 COL14A1Q05707 1796 aaKnown RBP13.17□□□□□ -0.3
BRCC3-207ENST00000411985 CDK12Q9NYV4 1490 aaPredicted RBP13.17□□□□□ -0.3
BRCC3-207ENST00000411985 NGLY1Q96IV0 654 aa13.17□□□□□ -0.3
BRCC3-207ENST00000411985 GPRASP1Q5JY77 1395 aa13.17□□□□□ -0.3
BRCC3-207ENST00000411985 RALGAPBQ86X10 1494 aa13.16□□□□□ -0.3
BRCC3-207ENST00000411985 BRWD3Q6RI45 1802 aa13.16□□□□□ -0.3
BRCC3-207ENST00000411985 NUDT16Q96DE0 195 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms