RNA–Protein interactions for RNA: ENST00000410940.1

RNU4-78P-201, Transcript of RNA, U4 small nuclear 78, pseudogene, humanhuman

BASIC

Gene RNU4-78P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-78P-201ENST00000410940 TNFRSF10AO00220 468 aa6.36□□□□□ -1.39
RNU4-78P-201ENST00000410940 SOCS7O14512 581 aa6.36□□□□□ -1.39
RNU4-78P-201ENST00000410940 GDF9O60383 454 aa6.36□□□□□ -1.39
RNU4-78P-201ENST00000410940 ZPR1O75312 459 aa6.36□□□□□ -1.39
RNU4-78P-201ENST00000410940 MS4A1P11836 297 aa6.36□□□□□ -1.39
RNU4-78P-201ENST00000410940 TSR1Q2NL82 804 aaKnown RBP6.36□□□□□ -1.39
RNU4-78P-201ENST00000410940 CDCA7LQ96GN5 454 aa6.36□□□□□ -1.39
RNU4-78P-201ENST00000410940 FAM198AQ9UFP1 575 aa6.36□□□□□ -1.39
RNU4-78P-201ENST00000410940 ZNF777Q9ULD5 760 aaPredicted RBP6.36□□□□□ -1.39
RNU4-78P-201ENST00000410940 C3orf80F5H4A9 247 aa6.35□□□□□ -1.39
RNU4-78P-201ENST00000410940 HDGFP51858 240 aaKnown RBP6.35□□□□□ -1.39
RNU4-78P-201ENST00000410940 TMEM259Q4ZIN3 620 aa6.35□□□□□ -1.39
RNU4-78P-201ENST00000410940 ZNF697Q5TEC3 545 aa6.35□□□□□ -1.39
RNU4-78P-201ENST00000410940 DDX12PQ92771 950 aa6.35□□□□□ -1.39
RNU4-78P-201ENST00000410940 TATDN2Q93075 761 aa6.35□□□□□ -1.39
RNU4-78P-201ENST00000410940 SSTR3P32745 418 aaPredicted RBP6.34□□□□□ -1.39
RNU4-78P-201ENST00000410940 PRSS12P56730 875 aa6.34□□□□□ -1.39
RNU4-78P-201ENST00000410940 EN1Q05925 392 aaPredicted RBP6.34□□□□□ -1.39
RNU4-78P-201ENST00000410940 MAP3K7O43318 606 aa6.33□□□□□ -1.4
RNU4-78P-201ENST00000410940 OATP04181 439 aa6.33□□□□□ -1.4
RNU4-78P-201ENST00000410940 TMCO4Q5TGY1 634 aa6.33□□□□□ -1.4
RNU4-78P-201ENST00000410940 LIAT1Q6ZQX7 453 aa6.33□□□□□ -1.4
RNU4-78P-201ENST00000410940 DACH1Q9UI36 760 aa6.33□□□□□ -1.4
RNU4-78P-201ENST00000410940 PNMA3Q9UL41 463 aa6.33□□□□□ -1.4
RNU4-78P-201ENST00000410940 ATP1B4Q9UN42 357 aaPredicted RBP6.33□□□□□ -1.4
RNU4-78P-201ENST00000410940 NBPF26B4DH59 902 aa6.32□□□□□ -1.4
RNU4-78P-201ENST00000410940 FECHP22830 423 aa6.32□□□□□ -1.4
RNU4-78P-201ENST00000410940 AEBP1Q8IUX7 1158 aa6.32□□□□□ -1.4
RNU4-78P-201ENST00000410940 ANKLE1Q8NAG6 615 aa6.32□□□□□ -1.4
RNU4-78P-201ENST00000410940 ZNF330Q9Y3S2 320 aaPredicted RBP6.32□□□□□ -1.4
RNU4-78P-201ENST00000410940 C11orf95C9JLR9 678 aaPredicted RBP6.31□□□□□ -1.4
RNU4-78P-201ENST00000410940 CRIPAKQ8N1N5 446 aa6.31□□□□□ -1.4
RNU4-78P-201ENST00000410940 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.31□□□□□ -1.4
RNU4-78P-201ENST00000410940 GMPR2Q9P2T1 348 aaKnown RBP6.31□□□□□ -1.4
RNU4-78P-201ENST00000410940 CERKQ8TCT0 537 aa6.3□□□□□ -1.4
RNU4-78P-201ENST00000410940 BEGAINQ9BUH8 593 aa6.3□□□□□ -1.4
RNU4-78P-201ENST00000410940 PPEF1O14829 653 aaPredicted RBP6.29□□□□□ -1.4
RNU4-78P-201ENST00000410940 TUSC1Q2TAM9 212 aa6.29□□□□□ -1.4
RNU4-78P-201ENST00000410940 LCE2CQ5TA81 110 aa6.29□□□□□ -1.4
RNU4-78P-201ENST00000410940 NUDT18Q6ZVK8 323 aa6.29□□□□□ -1.4
RNU4-78P-201ENST00000410940 RGS22Q8NE09 1264 aa6.29□□□□□ -1.4
RNU4-78P-201ENST00000410940 COG6Q9Y2V7 657 aa6.29□□□□□ -1.4
RNU4-78P-201ENST00000410940 MDM2Q00987 491 aaPredicted RBP6.28□□□□□ -1.4
RNU4-78P-201ENST00000410940 REPIN1Q9BWE0 567 aaKnown RBP6.28□□□□□ -1.4
RNU4-78P-201ENST00000410940 FAM217BQ9NTX9 383 aaPredicted RBP6.28□□□□□ -1.4
RNU4-78P-201ENST00000410940 CLK2P49760 499 aaKnown RBP6.27□□□□□ -1.41
RNU4-78P-201ENST00000410940 KCNA1Q09470 495 aa6.27□□□□□ -1.41
RNU4-78P-201ENST00000410940 SWT1Q5T5J6 900 aaKnown RBP6.27□□□□□ -1.41
RNU4-78P-201ENST00000410940 PPP2R2DQ66LE6 453 aa6.27□□□□□ -1.41
RNU4-78P-201ENST00000410940 SLF2Q8IX21 1173 aa6.27□□□□□ -1.41
RNU4-78P-201ENST00000410940 PCDHB3Q9Y5E6 796 aa6.27□□□□□ -1.41
RNU4-78P-201ENST00000410940 TLL1O43897 1013 aa6.26□□□□□ -1.41
RNU4-78P-201ENST00000410940 S1PR4O95977 384 aa6.26□□□□□ -1.41
RNU4-78P-201ENST00000410940 AVPP01185 164 aa6.26□□□□□ -1.41
RNU4-78P-201ENST00000410940 BLOC1S3Q6QNY0 202 aa6.26□□□□□ -1.41
RNU4-78P-201ENST00000410940 RETREG2Q8NC44 543 aa6.26□□□□□ -1.41
RNU4-78P-201ENST00000410940 AXIN1O15169 862 aa6.25□□□□□ -1.41
RNU4-78P-201ENST00000410940 BRD1O95696 1058 aa6.25□□□□□ -1.41
RNU4-78P-201ENST00000410940 RFC5P40937 340 aa6.25□□□□□ -1.41
RNU4-78P-201ENST00000410940 MFAP1P55081 439 aaKnown RBP6.25□□□□□ -1.41
RNU4-78P-201ENST00000410940 SUZ12Q15022 739 aaKnown RBP6.25□□□□□ -1.41
RNU4-78P-201ENST00000410940 MYSM1Q5VVJ2 828 aa6.25□□□□□ -1.41
RNU4-78P-201ENST00000410940 PROCA1Q8NCQ7 364 aaPredicted RBP6.25□□□□□ -1.41
RNU4-78P-201ENST00000410940 POM121Q96HA1 1249 aa6.25□□□□□ -1.41
RNU4-78P-201ENST00000410940 CALR3Q96L12 384 aaKnown RBP6.25□□□□□ -1.41
RNU4-78P-201ENST00000410940 GZF1Q9H116 711 aaPredicted RBP6.25□□□□□ -1.41
RNU4-78P-201ENST00000410940 POLR3EQ9NVU0 708 aa6.25□□□□□ -1.41
RNU4-78P-201ENST00000410940 USTQ9Y2C2 406 aa6.25□□□□□ -1.41
RNU4-78P-201ENST00000410940 FAM181BA6NEQ2 426 aa6.24□□□□□ -1.41
RNU4-78P-201ENST00000410940 TERTO14746 1132 aaKnown RBP6.24□□□□□ -1.41
RNU4-78P-201ENST00000410940 GJA5P36382 358 aa6.24□□□□□ -1.41
RNU4-78P-201ENST00000410940 PRR14Q9BWN1 585 aa6.24□□□□□ -1.41
RNU4-78P-201ENST00000410940 NPDC1Q9NQX5 325 aaPredicted RBP6.24□□□□□ -1.41
RNU4-78P-201ENST00000410940 PKD2L1Q9P0L9 805 aa6.24□□□□□ -1.41
RNU4-78P-201ENST00000410940 RBM27Q9P2N5 1060 aaKnown RBP6.24□□□□□ -1.41
RNU4-78P-201ENST00000410940 FOXC1Q12948 553 aa6.23□□□□□ -1.41
RNU4-78P-201ENST00000410940 PLA2G2CQ5R387 149 aa6.23□□□□□ -1.41
RNU4-78P-201ENST00000410940 AMOTL2Q9Y2J4 779 aa6.23□□□□□ -1.41
RNU4-78P-201ENST00000410940 E9PSI1 815 aa6.22□□□□□ -1.41
RNU4-78P-201ENST00000410940 CTC1Q2NKJ3 1217 aa6.22□□□□□ -1.41
RNU4-78P-201ENST00000410940 METTL3Q86U44 580 aaKnown RBP6.22□□□□□ -1.41
RNU4-78P-201ENST00000410940 SLC4A3P48751 1232 aa6.21□□□□□ -1.42
RNU4-78P-201ENST00000410940 PRIM1P49642 420 aaKnown RBP6.21□□□□□ -1.42
RNU4-78P-201ENST00000410940 SMCPP49901 116 aaPredicted RBP6.21□□□□□ -1.42
RNU4-78P-201ENST00000410940 WASHC4Q2M389 1173 aa6.21□□□□□ -1.42
RNU4-78P-201ENST00000410940 PBXIP1Q96AQ6 731 aa6.21□□□□□ -1.42
RNU4-78P-201ENST00000410940 TBC1D2Q9BYX2 928 aa6.21□□□□□ -1.42
RNU4-78P-201ENST00000410940 TOR4AQ9NXH8 423 aa6.21□□□□□ -1.42
RNU4-78P-201ENST00000410940 SNRKQ9NRH2 765 aa6.2□□□□□ -1.42
RNU4-78P-201ENST00000410940 MTMR7Q9Y216 660 aa6.2□□□□□ -1.42
RNU4-78P-201ENST00000410940 CSB-PGBD3P0DP91 1061 aa6.19□□□□□ -1.42
RNU4-78P-201ENST00000410940 IRF5Q13568 498 aa6.19□□□□□ -1.42
RNU4-78P-201ENST00000410940 RIC3Q7Z5B4 369 aa6.19□□□□□ -1.42
RNU4-78P-201ENST00000410940 SULF1Q8IWU6 871 aa6.19□□□□□ -1.42
RNU4-78P-201ENST00000410940 RBM46Q8TBY0 533 aaKnown RBP6.19□□□□□ -1.42
RNU4-78P-201ENST00000410940 PXYLP1Q8TE99 480 aa6.19□□□□□ -1.42
RNU4-78P-201ENST00000410940 PHOX2BQ99453 314 aa6.19□□□□□ -1.42
RNU4-78P-201ENST00000410940 SHROOM4Q9ULL8 1493 aa6.19□□□□□ -1.42
RNU4-78P-201ENST00000410940 SPTLC1O15269 473 aa6.18□□□□□ -1.42
RNU4-78P-201ENST00000410940 GLMNQ92990 594 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms