RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 TNFRSF10AO00220 468 aa10.56□□□□□ -0.72
CLK1-203ENST00000409769 USB1Q9BQ65 265 aaKnown RBP10.56□□□□□ -0.72
CLK1-203ENST00000409769 FAM187AA6NFU0 413 aa10.55□□□□□ -0.72
CLK1-203ENST00000409769 HOXA2O43364 376 aa10.55□□□□□ -0.72
CLK1-203ENST00000409769 PRDM9Q9NQV7 894 aa10.55□□□□□ -0.72
CLK1-203ENST00000409769 ZNF787Q6DD87 383 aa10.54□□□□□ -0.72
CLK1-203ENST00000409769 PKD2L1Q9P0L9 805 aa10.54□□□□□ -0.72
CLK1-203ENST00000409769 MYT1Q01538 1121 aa10.53□□□□□ -0.72
CLK1-203ENST00000409769 BARGINQ6ZT62 677 aa10.53□□□□□ -0.72
CLK1-203ENST00000409769 NUTM1Q86Y26 1132 aa10.53□□□□□ -0.72
CLK1-203ENST00000409769 DXOO77932 396 aaKnown RBP10.52□□□□□ -0.73
CLK1-203ENST00000409769 FOXC1Q12948 553 aa10.52□□□□□ -0.73
CLK1-203ENST00000409769 ZMYND10O75800 440 aa10.51□□□□□ -0.73
CLK1-203ENST00000409769 CYP4X1Q8N118 509 aa10.5□□□□□ -0.73
CLK1-203ENST00000409769 AMHR2Q16671 573 aa10.48□□□□□ -0.73
CLK1-203ENST00000409769 TOR4AQ9NXH8 423 aa10.48□□□□□ -0.73
CLK1-203ENST00000409769 SSTR3P32745 418 aaPredicted RBP10.47□□□□□ -0.73
CLK1-203ENST00000409769 TRIM32Q13049 653 aa10.47□□□□□ -0.73
CLK1-203ENST00000409769 RETREG3Q86VR2 466 aa10.47□□□□□ -0.73
CLK1-203ENST00000409769 ZC3H15Q8WU90 426 aaKnown RBP10.47□□□□□ -0.73
CLK1-203ENST00000409769 WNT7AO00755 349 aa10.46□□□□□ -0.73
CLK1-203ENST00000409769 TTLL12Q14166 644 aaPredicted RBP10.46□□□□□ -0.73
CLK1-203ENST00000409769 CRIPAKQ8N1N5 446 aa10.46□□□□□ -0.73
CLK1-203ENST00000409769 REPIN1Q9BWE0 567 aaKnown RBP10.46□□□□□ -0.73
CLK1-203ENST00000409769 AVPP01185 164 aa10.45□□□□□ -0.74
CLK1-203ENST00000409769 JUNDP17535 347 aa10.45□□□□□ -0.74
CLK1-203ENST00000409769 HLA-CQ95604 372 aa10.45□□□□□ -0.74
CLK1-203ENST00000409769 FDX1P10109 184 aa10.44□□□□□ -0.74
CLK1-203ENST00000409769 CTC1Q2NKJ3 1217 aa10.44□□□□□ -0.74
CLK1-203ENST00000409769 TTC24A2A3L6 582 aaPredicted RBP10.43□□□□□ -0.74
CLK1-203ENST00000409769 DIXDC1Q155Q3 683 aa10.43□□□□□ -0.74
CLK1-203ENST00000409769 BCANQ96GW7 911 aa10.43□□□□□ -0.74
CLK1-203ENST00000409769 WNT7BP56706 349 aa10.42□□□□□ -0.74
CLK1-203ENST00000409769 GUCA2AQ02747 115 aa10.42□□□□□ -0.74
CLK1-203ENST00000409769 CCDC24Q8N4L8 307 aa10.42□□□□□ -0.74
CLK1-203ENST00000409769 AAASQ9NRG9 546 aa10.42□□□□□ -0.74
CLK1-203ENST00000409769 SNIP1Q8TAD8 396 aaKnown RBP10.41□□□□□ -0.74
CLK1-203ENST00000409769 SPIRE2Q8WWL2 714 aa10.41□□□□□ -0.74
CLK1-203ENST00000409769 SMCPP49901 116 aaPredicted RBP10.4□□□□□ -0.74
CLK1-203ENST00000409769 GIGYF2Q6Y7W6 1299 aaKnown RBP10.4□□□□□ -0.74
CLK1-203ENST00000409769 SPDYE5A6NIY4 337 aa10.39□□□□□ -0.75
CLK1-203ENST00000409769 C6orf229H3BNL8 230 aa10.39□□□□□ -0.75
CLK1-203ENST00000409769 GJA5P36382 358 aa10.39□□□□□ -0.75
CLK1-203ENST00000409769 NUDT12Q9BQG2 462 aa10.39□□□□□ -0.75
CLK1-203ENST00000409769 AXIN1O15169 862 aa10.38□□□□□ -0.75
CLK1-203ENST00000409769 SYMPKQ92797 1274 aaKnown RBP10.38□□□□□ -0.75
CLK1-203ENST00000409769 MRGPRX2Q96LB1 330 aa10.37□□□□□ -0.75
CLK1-203ENST00000409769 ST8SIA5O15466 376 aa10.36□□□□□ -0.75
CLK1-203ENST00000409769 MS4A1P11836 297 aa10.36□□□□□ -0.75
CLK1-203ENST00000409769 AK7Q96M32 723 aa10.36□□□□□ -0.75
CLK1-203ENST00000409769 PCDHGC3Q9UN70 934 aa10.36□□□□□ -0.75
CLK1-203ENST00000409769 PTPRNQ16849 979 aa10.35□□□□□ -0.75
CLK1-203ENST00000409769 DESI1Q6ICB0 168 aa10.35□□□□□ -0.75
CLK1-203ENST00000409769 ZNF775Q96BV0 537 aaPredicted RBP10.35□□□□□ -0.75
CLK1-203ENST00000409769 BEGAINQ9BUH8 593 aa10.35□□□□□ -0.75
CLK1-203ENST00000409769 MOXD2PA6NHM9 499 aa10.34□□□□□ -0.75
CLK1-203ENST00000409769 CCNYL3P0C7X3 344 aa10.34□□□□□ -0.75
CLK1-203ENST00000409769 MTMR2Q13614 643 aa10.34□□□□□ -0.75
CLK1-203ENST00000409769 RC3H1Q5TC82 1133 aaKnown RBP10.34□□□□□ -0.75
CLK1-203ENST00000409769 TRIM66O15016 1216 aa10.33□□□□□ -0.76
CLK1-203ENST00000409769 SMPD1P17405 629 aa10.33□□□□□ -0.76
CLK1-203ENST00000409769 NDUFV2P19404 249 aa10.32□□□□□ -0.76
CLK1-203ENST00000409769 SKOR1P84550 965 aa10.32□□□□□ -0.76
CLK1-203ENST00000409769 PARP9Q8IXQ6 854 aa10.32□□□□□ -0.76
CLK1-203ENST00000409769 POTECB2RU33 542 aa10.3□□□□□ -0.76
CLK1-203ENST00000409769 PRR7Q8TB68 274 aa10.3□□□□□ -0.76
CLK1-203ENST00000409769 TBC1D2Q9BYX2 928 aa10.3□□□□□ -0.76
CLK1-203ENST00000409769 EVA1BQ9NVM1 165 aa10.3□□□□□ -0.76
CLK1-203ENST00000409769 RSBN1LQ6PCB5 846 aaPredicted RBP10.29□□□□□ -0.76
CLK1-203ENST00000409769 J3QL48 77 aa10.28□□□□□ -0.76
CLK1-203ENST00000409769 EHBP1Q8NDI1 1231 aa10.28□□□□□ -0.76
CLK1-203ENST00000409769 SPTLC1O15269 473 aa10.27□□□□□ -0.77
CLK1-203ENST00000409769 KCNH2Q12809 1159 aa10.27□□□□□ -0.77
CLK1-203ENST00000409769 PRPF38BQ5VTL8 546 aaKnown RBP10.27□□□□□ -0.77
CLK1-203ENST00000409769 PTCRAQ6ISU1 281 aaPredicted RBP10.27□□□□□ -0.77
CLK1-203ENST00000409769 UNC93B1Q9H1C4 597 aa10.26□□□□□ -0.77
CLK1-203ENST00000409769 ZBTB3Q9H5J0 574 aa10.26□□□□□ -0.77
CLK1-203ENST00000409769 SENP2Q9HC62 589 aa10.26□□□□□ -0.77
CLK1-203ENST00000409769 GMPR2Q9P2T1 348 aaKnown RBP10.26□□□□□ -0.77
CLK1-203ENST00000409769 DACH1Q9UI36 760 aa10.25□□□□□ -0.77
CLK1-203ENST00000409769 C11orf95C9JLR9 678 aaPredicted RBP10.24□□□□□ -0.77
CLK1-203ENST00000409769 SIAH2O43255 324 aa10.24□□□□□ -0.77
CLK1-203ENST00000409769 ALDH1A1P00352 501 aa10.24□□□□□ -0.77
CLK1-203ENST00000409769 SH3BP2P78314 561 aa10.24□□□□□ -0.77
CLK1-203ENST00000409769 ATP13A2Q9NQ11 1180 aa10.24□□□□□ -0.77
CLK1-203ENST00000409769 PDE4DQ08499 809 aa10.23□□□□□ -0.77
CLK1-203ENST00000409769 TUSC1Q2TAM9 212 aa10.22□□□□□ -0.77
CLK1-203ENST00000409769 LYPD8Q6UX82 237 aa10.22□□□□□ -0.77
CLK1-203ENST00000409769 RIC3Q7Z5B4 369 aa10.22□□□□□ -0.77
CLK1-203ENST00000409769 HPS1Q92902 700 aa10.22□□□□□ -0.77
CLK1-203ENST00000409769 KIFC2Q96AC6 838 aa10.22□□□□□ -0.77
CLK1-203ENST00000409769 WASF2Q9Y6W5 498 aa10.22□□□□□ -0.77
CLK1-203ENST00000409769 PLEKHG3A1L390 1219 aa10.21□□□□□ -0.77
CLK1-203ENST00000409769 VARSP26640 1264 aaKnown RBP10.21□□□□□ -0.77
CLK1-203ENST00000409769 MPNDQ8N594 471 aa10.21□□□□□ -0.77
CLK1-203ENST00000409769 HRCP23327 699 aa10.2□□□□□ -0.78
CLK1-203ENST00000409769 TREML4Q6UXN2 200 aa10.2□□□□□ -0.78
CLK1-203ENST00000409769 ZNF511Q8NB15 262 aa10.2□□□□□ -0.78
CLK1-203ENST00000409769 TRIM47Q96LD4 638 aa10.19□□□□□ -0.78
CLK1-203ENST00000409769 PCDHB15Q9Y5E8 787 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms