RNA–Protein interactions for RNA: ENST00000409598.8

SH3D19-203, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 5,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-203ENST00000409598 PNISRQ8TF01 805 aaKnown RBP9.44□□□□□ -0.9
SH3D19-203ENST00000409598 SMARCC1Q92922 1105 aaPredicted RBP9.44□□□□□ -0.9
SH3D19-203ENST00000409598 TULP1O00294 542 aaPredicted RBP9.44□□□□□ -0.9
SH3D19-203ENST00000409598 ST20-MTHFSA0A0A6YYL1 179 aa9.44□□□□□ -0.9
SH3D19-203ENST00000409598 CFAP44Q96MT7 982 aa9.44□□□□□ -0.9
SH3D19-203ENST00000409598 EIF2S2P20042 333 aaKnown RBP9.43□□□□□ -0.9
SH3D19-203ENST00000409598 USP21Q9UK80 565 aa9.43□□□□□ -0.9
SH3D19-203ENST00000409598 GLIPR1L2Q4G1C9 344 aa9.43□□□□□ -0.9
SH3D19-203ENST00000409598 TBX22Q9Y458 520 aa9.43□□□□□ -0.9
SH3D19-203ENST00000409598 TRPC5Q9UL62 973 aaPredicted RBP9.43□□□□□ -0.9
SH3D19-203ENST00000409598 SUPT6HQ7KZ85 1726 aaKnown RBP9.43□□□□□ -0.9
SH3D19-203ENST00000409598 DDB1Q16531 1140 aa9.42□□□□□ -0.9
SH3D19-203ENST00000409598 TSHZ2Q9NRE2 1034 aa9.42□□□□□ -0.9
SH3D19-203ENST00000409598 KIAA1107Q9UPP5 1409 aa9.42□□□□□ -0.9
SH3D19-203ENST00000409598 KDM6BO15054 1643 aa9.42□□□□□ -0.9
SH3D19-203ENST00000409598 ZNF530Q6P9A1 599 aaPredicted RBP9.42□□□□□ -0.9
SH3D19-203ENST00000409598 CABP1Q9NZU7 370 aa9.42□□□□□ -0.9
SH3D19-203ENST00000409598 ZFYVE16Q7Z3T8 1539 aa9.42□□□□□ -0.9
SH3D19-203ENST00000409598 KDM5BQ9UGL1 1544 aa9.42□□□□□ -0.9
SH3D19-203ENST00000409598 SLAIN2Q9P270 581 aa9.42□□□□□ -0.9
SH3D19-203ENST00000409598 UGGT2Q9NYU1 1516 aa9.42□□□□□ -0.9
SH3D19-203ENST00000409598 MTHFSP49914 203 aa9.41□□□□□ -0.9
SH3D19-203ENST00000409598 A0A087WZG4 1122 aa9.41□□□□□ -0.9
SH3D19-203ENST00000409598 IRX6P78412 446 aaPredicted RBP9.41□□□□□ -0.9
SH3D19-203ENST00000409598 RAPGEF6Q8TEU7 1601 aa9.41□□□□□ -0.9
SH3D19-203ENST00000409598 SLC4A10Q6U841 1118 aa9.41□□□□□ -0.9
SH3D19-203ENST00000409598 C9orf78Q9NZ63 289 aaPredicted RBP9.41□□□□□ -0.9
SH3D19-203ENST00000409598 BEGAINQ9BUH8 593 aa9.41□□□□□ -0.9
SH3D19-203ENST00000409598 NAP1L2Q9ULW6 460 aaPredicted RBP9.41□□□□□ -0.9
SH3D19-203ENST00000409598 TRAPPC8Q9Y2L5 1435 aa9.41□□□□□ -0.9
SH3D19-203ENST00000409598 CAMSAP2Q08AD1 1489 aa9.4□□□□□ -0.9
SH3D19-203ENST00000409598 RIC3Q7Z5B4 369 aa9.4□□□□□ -0.9
SH3D19-203ENST00000409598 PANK3Q9H999 370 aa9.4□□□□□ -0.9
SH3D19-203ENST00000409598 RIMS2Q9UQ26 1411 aa9.4□□□□□ -0.9
SH3D19-203ENST00000409598 GGNBP2Q9H3C7 697 aa9.4□□□□□ -0.91
SH3D19-203ENST00000409598 CFAP74Q9C0B2 1584 aa9.39□□□□□ -0.91
SH3D19-203ENST00000409598 BIVM-ERCC5R4GMW8 1640 aa9.39□□□□□ -0.91
SH3D19-203ENST00000409598 RPRD2Q5VT52 1461 aaKnown RBP9.39□□□□□ -0.91
SH3D19-203ENST00000409598 RBM19Q9Y4C8 960 aaKnown RBP9.39□□□□□ -0.91
SH3D19-203ENST00000409598 TMOD2Q9NZR1 351 aa9.39□□□□□ -0.91
SH3D19-203ENST00000409598 TSPYL4Q9UJ04 414 aa9.39□□□□□ -0.91
SH3D19-203ENST00000409598 MAGI2Q86UL8 1455 aa9.39□□□□□ -0.91
SH3D19-203ENST00000409598 WASLO00401 505 aaPredicted RBP9.38□□□□□ -0.91
SH3D19-203ENST00000409598 NCBP3Q53F19 620 aaKnown RBP9.38□□□□□ -0.91
SH3D19-203ENST00000409598 CLSTN1O94985 981 aa9.38□□□□□ -0.91
SH3D19-203ENST00000409598 RFC4P35249 363 aa9.38□□□□□ -0.91
SH3D19-203ENST00000409598 AMOTQ4VCS5 1084 aa9.38□□□□□ -0.91
SH3D19-203ENST00000409598 KIAA1211Q6ZU35 1233 aa9.38□□□□□ -0.91
SH3D19-203ENST00000409598 PTPRKQ15262 1439 aa9.38□□□□□ -0.91
SH3D19-203ENST00000409598 FAM177BA6PVY3 158 aa9.38□□□□□ -0.91
SH3D19-203ENST00000409598 TEX13AQ9BXU3 409 aaPredicted RBP9.38□□□□□ -0.91
SH3D19-203ENST00000409598 TFCP2L1Q9NZI6 479 aa9.38□□□□□ -0.91
SH3D19-203ENST00000409598 CCDC136Q96JN2 1154 aa9.37□□□□□ -0.91
SH3D19-203ENST00000409598 ZRSR1Q15695 479 aaKnown RBP9.37□□□□□ -0.91
SH3D19-203ENST00000409598 GPR162Q16538 588 aa9.37□□□□□ -0.91
SH3D19-203ENST00000409598 QTRT2Q9H974 415 aaKnown RBP9.37□□□□□ -0.91
SH3D19-203ENST00000409598 RRP7AQ9Y3A4 280 aaKnown RBP9.37□□□□□ -0.91
SH3D19-203ENST00000409598 ARAP1Q96P48 1450 aa9.37□□□□□ -0.91
SH3D19-203ENST00000409598 DEKP35659 375 aaKnown RBP9.37□□□□□ -0.91
SH3D19-203ENST00000409598 WAPLQ7Z5K2 1190 aa9.37□□□□□ -0.91
SH3D19-203ENST00000409598 GNL3LQ9NVN8 582 aaKnown RBP9.37□□□□□ -0.91
SH3D19-203ENST00000409598 KIAA0556O60303 1618 aa9.37□□□□□ -0.91
SH3D19-203ENST00000409598 MCCP23508 829 aa9.37□□□□□ -0.91
SH3D19-203ENST00000409598 TCEAL9Q9UHQ7 104 aa9.36□□□□□ -0.91
SH3D19-203ENST00000409598 RTN4Q9NQC3 1192 aaKnown RBP9.36□□□□□ -0.91
SH3D19-203ENST00000409598 CLEC11AQ9Y240 323 aa9.36□□□□□ -0.91
SH3D19-203ENST00000409598 USP47Q96K76 1375 aa9.36□□□□□ -0.91
SH3D19-203ENST00000409598 TTLL12Q14166 644 aaPredicted RBP9.35□□□□□ -0.91
SH3D19-203ENST00000409598 TOMM22Q9NS69 142 aa9.35□□□□□ -0.91
SH3D19-203ENST00000409598 KRI1Q8N9T8 703 aaKnown RBP9.35□□□□□ -0.91
SH3D19-203ENST00000409598 THOC2Q8NI27 1593 aaKnown RBP9.35□□□□□ -0.91
SH3D19-203ENST00000409598 ST5P78524 1137 aa9.35□□□□□ -0.91
SH3D19-203ENST00000409598 RPGRQ92834 1020 aaKnown RBP9.35□□□□□ -0.91
SH3D19-203ENST00000409598 PARP3Q9Y6F1 533 aa9.35□□□□□ -0.91
SH3D19-203ENST00000409598 BICDL1Q6ZP65 573 aa9.34□□□□□ -0.91
SH3D19-203ENST00000409598 ARHGEF10O15013 1369 aa9.34□□□□□ -0.91
SH3D19-203ENST00000409598 YEATS2Q9ULM3 1422 aa9.34□□□□□ -0.91
SH3D19-203ENST00000409598 GNAI1P63096 354 aa9.34□□□□□ -0.91
SH3D19-203ENST00000409598 APBA3O96018 575 aa9.34□□□□□ -0.91
SH3D19-203ENST00000409598 MPRIPQ6WCQ1 1025 aa9.34□□□□□ -0.91
SH3D19-203ENST00000409598 FBXO41Q8TF61 875 aa9.34□□□□□ -0.91
SH3D19-203ENST00000409598 RAD21O60216 631 aa9.33□□□□□ -0.92
SH3D19-203ENST00000409598 PRKCSHP14314 528 aaPredicted RBP9.33□□□□□ -0.92
SH3D19-203ENST00000409598 NCLP19338 710 aaKnown RBP9.33□□□□□ -0.92
SH3D19-203ENST00000409598 DUOX2Q9NRD8 1548 aa9.33□□□□□ -0.92
SH3D19-203ENST00000409598 AIMP1Q12904 312 aaKnown RBP9.33□□□□□ -0.92
SH3D19-203ENST00000409598 HSP90AB3PQ58FF7 597 aa9.33□□□□□ -0.92
SH3D19-203ENST00000409598 FLAD1Q8NFF5 587 aa9.33□□□□□ -0.92
SH3D19-203ENST00000409598 RBM5P52756 815 aaKnown RBP eCLIP9.32□□□□□ -0.92
SH3D19-203ENST00000409598 GNL2Q13823 731 aaKnown RBP9.32□□□□□ -0.92
SH3D19-203ENST00000409598 LMOD1P29536 600 aaPredicted RBP9.32□□□□□ -0.92
SH3D19-203ENST00000409598 TAOK2Q9UL54 1235 aa9.32□□□□□ -0.92
SH3D19-203ENST00000409598 NPHP4O75161 1426 aaPredicted RBP9.32□□□□□ -0.92
SH3D19-203ENST00000409598 VPS53Q5VIR6 699 aa9.32□□□□□ -0.92
SH3D19-203ENST00000409598 TTC21AQ8NDW8 1320 aa9.32□□□□□ -0.92
SH3D19-203ENST00000409598 PBRM1Q86U86 1689 aa9.31□□□□□ -0.92
SH3D19-203ENST00000409598 NF2P35240 595 aa9.31□□□□□ -0.92
SH3D19-203ENST00000409598 CHRNA2Q15822 529 aa9.31□□□□□ -0.92
SH3D19-203ENST00000409598 ZNF622Q969S3 477 aaKnown RBP eCLIP9.31□□□□□ -0.92
SH3D19-203ENST00000409598 HMOX1P09601 288 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms