RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 PRAM1Q96QH2 718 aa28.46■■■□□ 2.15
PDLIM2-207ENST00000409417 POGKQ9P215 609 aa28.43■■■□□ 2.14
PDLIM2-207ENST00000409417 NBPF8Q3BBV2 869 aa28.42■■■□□ 2.14
PDLIM2-207ENST00000409417 MST1RQ04912 1400 aa28.4■■■□□ 2.14
PDLIM2-207ENST00000409417 HSPA1LP34931 641 aa28.4■■■□□ 2.14
PDLIM2-207ENST00000409417 TIMELESSQ9UNS1 1208 aa28.4■■■□□ 2.14
PDLIM2-207ENST00000409417 SAFB2Q14151 953 aaKnown RBP eCLIP28.39■■■□□ 2.13
PDLIM2-207ENST00000409417 TRPM1Q7Z4N2 1603 aa28.36■■■□□ 2.13
PDLIM2-207ENST00000409417 CDC42BPGQ6DT37 1551 aa28.36■■■□□ 2.13
PDLIM2-207ENST00000409417 ROBO1Q9Y6N7 1651 aa28.36■■■□□ 2.13
PDLIM2-207ENST00000409417 ROCK2O75116 1388 aaKnown RBP28.36■■■□□ 2.13
PDLIM2-207ENST00000409417 BRINP3Q76B58 766 aa28.34■■■□□ 2.13
PDLIM2-207ENST00000409417 C1orf167Q5SNV9 1468 aa28.33■■■□□ 2.13
PDLIM2-207ENST00000409417 GPRASP1Q5JY77 1395 aa28.32■■■□□ 2.12
PDLIM2-207ENST00000409417 ARHGEF28Q8N1W1 1705 aaKnown RBP28.3■■■□□ 2.12
PDLIM2-207ENST00000409417 MINK1Q8N4C8 1332 aaPredicted RBP28.29■■■□□ 2.12
PDLIM2-207ENST00000409417 RALGAPBQ86X10 1494 aa28.28■■■□□ 2.12
PDLIM2-207ENST00000409417 HIRIP3Q9BW71 556 aaPredicted RBP28.27■■■□□ 2.12
PDLIM2-207ENST00000409417 ORAI2Q96SN7 254 aa28.26■■■□□ 2.11
PDLIM2-207ENST00000409417 ADGRB2O60241 1585 aa28.26■■■□□ 2.11
PDLIM2-207ENST00000409417 NUTM2FA1L443 756 aa28.25■■■□□ 2.11
PDLIM2-207ENST00000409417 CARD11Q9BXL7 1154 aa28.25■■■□□ 2.11
PDLIM2-207ENST00000409417 CENPJQ9HC77 1338 aaPredicted RBP28.25■■■□□ 2.11
PDLIM2-207ENST00000409417 WASLO00401 505 aaPredicted RBP28.22■■■□□ 2.11
PDLIM2-207ENST00000409417 ESCO1Q5FWF5 840 aa28.22■■■□□ 2.11
PDLIM2-207ENST00000409417 EIF3AQ14152 1382 aaKnown RBP28.21■■■□□ 2.11
PDLIM2-207ENST00000409417 FMN2Q9NZ56 1722 aa28.21■■■□□ 2.11
PDLIM2-207ENST00000409417 AHDC1Q5TGY3 1603 aaPredicted RBP28.2■■■□□ 2.11
PDLIM2-207ENST00000409417 ANKARQ7Z5J8 1434 aa28.18■■■□□ 2.1
PDLIM2-207ENST00000409417 PHLPP1O60346 1717 aa28.16■■■□□ 2.1
PDLIM2-207ENST00000409417 DDX17Q92841 729 aaKnown RBP28.15■■■□□ 2.1
PDLIM2-207ENST00000409417 CDK19Q9BWU1 502 aa28.14■■■□□ 2.09
PDLIM2-207ENST00000409417 TULP4Q9NRJ4 1543 aa28.13■■■□□ 2.09
PDLIM2-207ENST00000409417 COL16A1Q07092 1604 aaPredicted RBP28.13■■■□□ 2.09
PDLIM2-207ENST00000409417 NHSL1Q5SYE7 1610 aa28.13■■■□□ 2.09
PDLIM2-207ENST00000409417 NPHP3Q7Z494 1330 aa28.11■■■□□ 2.09
PDLIM2-207ENST00000409417 PRR36Q9H6K5 1346 aa28.11■■■□□ 2.09
PDLIM2-207ENST00000409417 FOXO3O43524 673 aa28.11■■■□□ 2.09
PDLIM2-207ENST00000409417 PHF8Q9UPP1 1060 aa28.11■■■□□ 2.09
PDLIM2-207ENST00000409417 SOS2Q07890 1332 aaPredicted RBP28.1■■■□□ 2.09
PDLIM2-207ENST00000409417 QRICH2Q9H0J4 1663 aa28.1■■■□□ 2.09
PDLIM2-207ENST00000409417 JCADQ9P266 1359 aa28.09■■■□□ 2.09
PDLIM2-207ENST00000409417 USP32Q8NFA0 1604 aa28.09■■■□□ 2.09
PDLIM2-207ENST00000409417 LRRC59Q96AG4 307 aaKnown RBP28.08■■■□□ 2.09
PDLIM2-207ENST00000409417 NUDT16Q96DE0 195 aaKnown RBP28.08■■■□□ 2.09
PDLIM2-207ENST00000409417 SBNO2Q9Y2G9 1366 aa28.06■■■□□ 2.08
PDLIM2-207ENST00000409417 RGPD8O14715 1765 aaPredicted RBP28.06■■■□□ 2.08
PDLIM2-207ENST00000409417 KIF1AQ12756 1690 aa28.06■■■□□ 2.08
PDLIM2-207ENST00000409417 EVC2Q86UK5 1308 aa28.06■■■□□ 2.08
PDLIM2-207ENST00000409417 SRPK2P78362 688 aaKnown RBP28.05■■■□□ 2.08
PDLIM2-207ENST00000409417 ATP7BP35670 1465 aa28.05■■■□□ 2.08
PDLIM2-207ENST00000409417 CCDC61Q9Y6R9 512 aa28.04■■■□□ 2.08
PDLIM2-207ENST00000409417 PMFBP1Q8TBY8 1022 aa28.03■■■□□ 2.08
PDLIM2-207ENST00000409417 CABP2Q9NPB3 220 aa28.02■■■□□ 2.08
PDLIM2-207ENST00000409417 PXDNQ92626 1479 aa28.02■■■□□ 2.08
PDLIM2-207ENST00000409417 ST20-MTHFSA0A0A6YYL1 179 aa28.02■■■□□ 2.08
PDLIM2-207ENST00000409417 XPCQ01831 940 aaPredicted RBP28.02■■■□□ 2.08
PDLIM2-207ENST00000409417 USP47Q96K76 1375 aa28.01■■■□□ 2.07
PDLIM2-207ENST00000409417 PSME1Q06323 249 aa27.99■■■□□ 2.07
PDLIM2-207ENST00000409417 KRT28Q7Z3Y7 464 aa27.99■■■□□ 2.07
PDLIM2-207ENST00000409417 SPATA31A6Q5VVP1 1343 aa27.98■■■□□ 2.07
PDLIM2-207ENST00000409417 NGDNQ8NEJ9 315 aaKnown RBP27.97■■■□□ 2.07
PDLIM2-207ENST00000409417 TESK2Q96S53 571 aa27.97■■■□□ 2.07
PDLIM2-207ENST00000409417 PLEKHG3A1L390 1219 aa27.96■■■□□ 2.07
PDLIM2-207ENST00000409417 SLC24A1O60721 1099 aa27.96■■■□□ 2.07
PDLIM2-207ENST00000409417 PNPLA6Q8IY17 1366 aa27.96■■■□□ 2.07
PDLIM2-207ENST00000409417 ITSN1Q15811 1721 aa27.95■■■□□ 2.07
PDLIM2-207ENST00000409417 SHPRHQ149N8 1683 aa27.95■■■□□ 2.07
PDLIM2-207ENST00000409417 TOPAZ1Q8N9V7 1692 aa27.92■■■□□ 2.06
PDLIM2-207ENST00000409417 SPATA31A3Q5VYP0 1347 aa27.92■■■□□ 2.06
PDLIM2-207ENST00000409417 PPIP5K1Q6PFW1 1433 aa27.92■■■□□ 2.06
PDLIM2-207ENST00000409417 MED1Q15648 1581 aaPredicted RBP27.92■■■□□ 2.06
PDLIM2-207ENST00000409417 SBNO1A3KN83 1393 aa27.92■■■□□ 2.06
PDLIM2-207ENST00000409417 POLR3AO14802 1390 aaPredicted RBP27.92■■■□□ 2.06
PDLIM2-207ENST00000409417 ACEP12821 1306 aa27.91■■■□□ 2.06
PDLIM2-207ENST00000409417 CABP1Q9NZU7 370 aa27.9■■■□□ 2.06
PDLIM2-207ENST00000409417 ATAD2Q6PL18 1390 aa27.9■■■□□ 2.06
PDLIM2-207ENST00000409417 PUS7Q96PZ0 661 aaKnown RBP27.89■■■□□ 2.05
PDLIM2-207ENST00000409417 TNS3Q68CZ2 1445 aa27.87■■■□□ 2.05
PDLIM2-207ENST00000409417 NUTM2BA6NNL0 878 aaPredicted RBP27.86■■■□□ 2.05
PDLIM2-207ENST00000409417 NUTM2EB1AL46 878 aaPredicted RBP27.86■■■□□ 2.05
PDLIM2-207ENST00000409417 NUTM2AQ8IVF1 878 aaPredicted RBP27.86■■■□□ 2.05
PDLIM2-207ENST00000409417 DISP3Q9P2K9 1392 aa27.85■■■□□ 2.05
PDLIM2-207ENST00000409417 EIF4G2P78344 907 aaKnown RBP eCLIP27.84■■■□□ 2.05
PDLIM2-207ENST00000409417 LRP6O75581 1613 aa27.84■■■□□ 2.05
PDLIM2-207ENST00000409417 ARHGEF10O15013 1369 aa27.84■■■□□ 2.05
PDLIM2-207ENST00000409417 TMF1P82094 1093 aa27.83■■■□□ 2.05
PDLIM2-207ENST00000409417 LMOD2Q6P5Q4 547 aa27.82■■■□□ 2.04
PDLIM2-207ENST00000409417 COL22A1Q8NFW1 1626 aaPredicted RBP27.81■■■□□ 2.04
PDLIM2-207ENST00000409417 PAK3O75914 559 aaPredicted RBP27.81■■■□□ 2.04
PDLIM2-207ENST00000409417 TRPM3Q9HCF6 1732 aaPredicted RBP27.81■■■□□ 2.04
PDLIM2-207ENST00000409417 MEX3CQ5U5Q3 659 aaKnown RBP27.8■■■□□ 2.04
PDLIM2-207ENST00000409417 PHF23Q9BUL5 403 aaPredicted RBP27.8■■■□□ 2.04
PDLIM2-207ENST00000409417 ZNF692Q9BU19 519 aaPredicted RBP27.78■■■□□ 2.04
PDLIM2-207ENST00000409417 BRD4O60885 1362 aaPredicted RBP27.78■■■□□ 2.04
PDLIM2-207ENST00000409417 HSPA5P11021 654 aaKnown RBP27.77■■■□□ 2.04
PDLIM2-207ENST00000409417 CDCA8Q53HL2 280 aa27.77■■■□□ 2.04
PDLIM2-207ENST00000409417 TMC1Q8TDI8 760 aa27.76■■■□□ 2.04
PDLIM2-207ENST00000409417 USP6P35125 1406 aa27.76■■■□□ 2.03
PDLIM2-207ENST00000409417 SLC12A5Q9H2X9 1139 aa27.76■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms