RNA–Protein interactions for RNA: ENST00000409259.1

AC013269.1-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC013269.1, Length 1,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC013269.1-201ENST00000409259 TIMELESSQ9UNS1 1208 aa28.96■■■□□ 2.23
AC013269.1-201ENST00000409259 SCAF1Q9H7N4 1312 aaKnown RBP28.95■■■□□ 2.23
AC013269.1-201ENST00000409259 PRAM1Q96QH2 718 aa28.95■■■□□ 2.22
AC013269.1-201ENST00000409259 TRPM1Q7Z4N2 1603 aa28.94■■■□□ 2.22
AC013269.1-201ENST00000409259 POGKQ9P215 609 aa28.91■■■□□ 2.22
AC013269.1-201ENST00000409259 MST1RQ04912 1400 aa28.88■■■□□ 2.21
AC013269.1-201ENST00000409259 ROCK2O75116 1388 aaKnown RBP28.87■■■□□ 2.21
AC013269.1-201ENST00000409259 ARHGEF28Q8N1W1 1705 aaKnown RBP28.87■■■□□ 2.21
AC013269.1-201ENST00000409259 SAFB2Q14151 953 aaKnown RBP eCLIP28.86■■■□□ 2.21
AC013269.1-201ENST00000409259 CDC42BPGQ6DT37 1551 aa28.86■■■□□ 2.21
AC013269.1-201ENST00000409259 GPRASP1Q5JY77 1395 aa28.85■■■□□ 2.21
AC013269.1-201ENST00000409259 ROBO1Q9Y6N7 1651 aa28.84■■■□□ 2.21
AC013269.1-201ENST00000409259 RALGAPBQ86X10 1494 aa28.83■■■□□ 2.21
AC013269.1-201ENST00000409259 HSPA1LP34931 641 aa28.81■■■□□ 2.2
AC013269.1-201ENST00000409259 C1orf167Q5SNV9 1468 aa28.81■■■□□ 2.2
AC013269.1-201ENST00000409259 BRINP3Q76B58 766 aa28.8■■■□□ 2.2
AC013269.1-201ENST00000409259 ADGRB2O60241 1585 aa28.78■■■□□ 2.2
AC013269.1-201ENST00000409259 MINK1Q8N4C8 1332 aaPredicted RBP28.77■■■□□ 2.2
AC013269.1-201ENST00000409259 HIRIP3Q9BW71 556 aaPredicted RBP28.76■■■□□ 2.19
AC013269.1-201ENST00000409259 CARD11Q9BXL7 1154 aa28.76■■■□□ 2.19
AC013269.1-201ENST00000409259 CENPJQ9HC77 1338 aaPredicted RBP28.75■■■□□ 2.19
AC013269.1-201ENST00000409259 FMN2Q9NZ56 1722 aa28.74■■■□□ 2.19
AC013269.1-201ENST00000409259 ORAI2Q96SN7 254 aa28.73■■■□□ 2.19
AC013269.1-201ENST00000409259 NUTM2FA1L443 756 aa28.71■■■□□ 2.19
AC013269.1-201ENST00000409259 WASLO00401 505 aaPredicted RBP28.71■■■□□ 2.19
AC013269.1-201ENST00000409259 EIF3AQ14152 1382 aaKnown RBP28.7■■■□□ 2.18
AC013269.1-201ENST00000409259 AHDC1Q5TGY3 1603 aaPredicted RBP28.69■■■□□ 2.18
AC013269.1-201ENST00000409259 ESCO1Q5FWF5 840 aa28.68■■■□□ 2.18
AC013269.1-201ENST00000409259 ANKARQ7Z5J8 1434 aa28.66■■■□□ 2.18
AC013269.1-201ENST00000409259 QRICH2Q9H0J4 1663 aa28.65■■■□□ 2.18
AC013269.1-201ENST00000409259 PHLPP1O60346 1717 aa28.64■■■□□ 2.18
AC013269.1-201ENST00000409259 NHSL1Q5SYE7 1610 aa28.64■■■□□ 2.18
AC013269.1-201ENST00000409259 CDK19Q9BWU1 502 aa28.64■■■□□ 2.17
AC013269.1-201ENST00000409259 USP32Q8NFA0 1604 aa28.63■■■□□ 2.17
AC013269.1-201ENST00000409259 TULP4Q9NRJ4 1543 aa28.63■■■□□ 2.17
AC013269.1-201ENST00000409259 RGPD8O14715 1765 aaPredicted RBP28.62■■■□□ 2.17
AC013269.1-201ENST00000409259 PRR36Q9H6K5 1346 aa28.61■■■□□ 2.17
AC013269.1-201ENST00000409259 COL16A1Q07092 1604 aaPredicted RBP28.61■■■□□ 2.17
AC013269.1-201ENST00000409259 DDX17Q92841 729 aaKnown RBP28.61■■■□□ 2.17
AC013269.1-201ENST00000409259 SBNO2Q9Y2G9 1366 aa28.59■■■□□ 2.17
AC013269.1-201ENST00000409259 PHF8Q9UPP1 1060 aa28.58■■■□□ 2.17
AC013269.1-201ENST00000409259 FOXO3O43524 673 aa28.58■■■□□ 2.16
AC013269.1-201ENST00000409259 NUDT16Q96DE0 195 aaKnown RBP28.58■■■□□ 2.16
AC013269.1-201ENST00000409259 NPHP3Q7Z494 1330 aa28.57■■■□□ 2.16
AC013269.1-201ENST00000409259 SOS2Q07890 1332 aaPredicted RBP28.57■■■□□ 2.16
AC013269.1-201ENST00000409259 KIF1AQ12756 1690 aa28.57■■■□□ 2.16
AC013269.1-201ENST00000409259 ATP7BP35670 1465 aa28.56■■■□□ 2.16
AC013269.1-201ENST00000409259 EVC2Q86UK5 1308 aa28.55■■■□□ 2.16
AC013269.1-201ENST00000409259 ST20-MTHFSA0A0A6YYL1 179 aa28.54■■■□□ 2.16
AC013269.1-201ENST00000409259 USP47Q96K76 1375 aa28.53■■■□□ 2.16
AC013269.1-201ENST00000409259 SRPK2P78362 688 aaKnown RBP28.53■■■□□ 2.16
AC013269.1-201ENST00000409259 LRRC59Q96AG4 307 aaKnown RBP28.53■■■□□ 2.16
AC013269.1-201ENST00000409259 JCADQ9P266 1359 aa28.52■■■□□ 2.16
AC013269.1-201ENST00000409259 CCDC61Q9Y6R9 512 aa28.52■■■□□ 2.16
AC013269.1-201ENST00000409259 PMFBP1Q8TBY8 1022 aa28.51■■■□□ 2.16
AC013269.1-201ENST00000409259 CABP2Q9NPB3 220 aa28.51■■■□□ 2.16
AC013269.1-201ENST00000409259 PXDNQ92626 1479 aa28.5■■■□□ 2.15
AC013269.1-201ENST00000409259 TESK2Q96S53 571 aa28.5■■■□□ 2.15
AC013269.1-201ENST00000409259 ITSN1Q15811 1721 aa28.49■■■□□ 2.15
AC013269.1-201ENST00000409259 SLC24A1O60721 1099 aa28.47■■■□□ 2.15
AC013269.1-201ENST00000409259 PLEKHG3A1L390 1219 aa28.46■■■□□ 2.15
AC013269.1-201ENST00000409259 XPCQ01831 940 aaPredicted RBP28.46■■■□□ 2.15
AC013269.1-201ENST00000409259 KRT28Q7Z3Y7 464 aa28.46■■■□□ 2.15
AC013269.1-201ENST00000409259 TOPAZ1Q8N9V7 1692 aa28.46■■■□□ 2.15
AC013269.1-201ENST00000409259 PSME1Q06323 249 aa28.45■■■□□ 2.14
AC013269.1-201ENST00000409259 SHPRHQ149N8 1683 aa28.44■■■□□ 2.14
AC013269.1-201ENST00000409259 NGDNQ8NEJ9 315 aaKnown RBP28.43■■■□□ 2.14
AC013269.1-201ENST00000409259 POLR3AO14802 1390 aaPredicted RBP28.42■■■□□ 2.14
AC013269.1-201ENST00000409259 PPIP5K1Q6PFW1 1433 aa28.41■■■□□ 2.14
AC013269.1-201ENST00000409259 PNPLA6Q8IY17 1366 aa28.41■■■□□ 2.14
AC013269.1-201ENST00000409259 PUS7Q96PZ0 661 aaKnown RBP28.41■■■□□ 2.14
AC013269.1-201ENST00000409259 SPATA31A6Q5VVP1 1343 aa28.41■■■□□ 2.14
AC013269.1-201ENST00000409259 ATAD2Q6PL18 1390 aa28.4■■■□□ 2.14
AC013269.1-201ENST00000409259 CABP1Q9NZU7 370 aa28.39■■■□□ 2.14
AC013269.1-201ENST00000409259 ACEP12821 1306 aa28.39■■■□□ 2.14
AC013269.1-201ENST00000409259 SPATA31A3Q5VYP0 1347 aa28.39■■■□□ 2.14
AC013269.1-201ENST00000409259 SBNO1A3KN83 1393 aa28.39■■■□□ 2.14
AC013269.1-201ENST00000409259 EIF4G2P78344 907 aaKnown RBP eCLIP28.37■■■□□ 2.13
AC013269.1-201ENST00000409259 MED1Q15648 1581 aaPredicted RBP28.35■■■□□ 2.13
AC013269.1-201ENST00000409259 TMF1P82094 1093 aa28.35■■■□□ 2.13
AC013269.1-201ENST00000409259 TNS3Q68CZ2 1445 aa28.34■■■□□ 2.13
AC013269.1-201ENST00000409259 TRPM3Q9HCF6 1732 aaPredicted RBP28.33■■■□□ 2.13
AC013269.1-201ENST00000409259 DISP3Q9P2K9 1392 aa28.32■■■□□ 2.12
AC013269.1-201ENST00000409259 HSPA5P11021 654 aaKnown RBP28.32■■■□□ 2.12
AC013269.1-201ENST00000409259 COL22A1Q8NFW1 1626 aaPredicted RBP28.32■■■□□ 2.12
AC013269.1-201ENST00000409259 LRP6O75581 1613 aa28.29■■■□□ 2.12
AC013269.1-201ENST00000409259 ARHGEF10O15013 1369 aa28.28■■■□□ 2.12
AC013269.1-201ENST00000409259 NUTM2BA6NNL0 878 aaPredicted RBP28.27■■■□□ 2.12
AC013269.1-201ENST00000409259 NUTM2EB1AL46 878 aaPredicted RBP28.27■■■□□ 2.12
AC013269.1-201ENST00000409259 CDCA8Q53HL2 280 aa28.27■■■□□ 2.12
AC013269.1-201ENST00000409259 NUTM2AQ8IVF1 878 aaPredicted RBP28.27■■■□□ 2.12
AC013269.1-201ENST00000409259 ZNF692Q9BU19 519 aaPredicted RBP28.27■■■□□ 2.12
AC013269.1-201ENST00000409259 BRD4O60885 1362 aaPredicted RBP28.27■■■□□ 2.12
AC013269.1-201ENST00000409259 ALS2Q96Q42 1657 aa28.26■■■□□ 2.11
AC013269.1-201ENST00000409259 CPSF1Q10570 1443 aaKnown RBP28.26■■■□□ 2.11
AC013269.1-201ENST00000409259 PAK3O75914 559 aaPredicted RBP28.26■■■□□ 2.11
AC013269.1-201ENST00000409259 SLC12A5Q9H2X9 1139 aa28.26■■■□□ 2.11
AC013269.1-201ENST00000409259 USP6P35125 1406 aa28.25■■■□□ 2.11
AC013269.1-201ENST00000409259 LMOD2Q6P5Q4 547 aa28.25■■■□□ 2.11
AC013269.1-201ENST00000409259 TMC1Q8TDI8 760 aa28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms