RNA–Protein interactions for RNA: ENST00000407630.1

SSR1P1-201, Transcript of signal sequence receptor subunit 1 pseudogene 1, humanhuman

BASIC

Gene SSR1P1, Length 814 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P1-201ENST00000407630 BRD1O95696 1058 aa16.45■□□□□ 0.22
SSR1P1-201ENST00000407630 ALG2Q9H553 416 aa16.45■□□□□ 0.22
SSR1P1-201ENST00000407630 KCNA1Q09470 495 aa16.44■□□□□ 0.22
SSR1P1-201ENST00000407630 POTEJP0CG39 1038 aa16.43■□□□□ 0.22
SSR1P1-201ENST00000407630 SWT1Q5T5J6 900 aaKnown RBP16.43■□□□□ 0.22
SSR1P1-201ENST00000407630 KCNK17Q96T54 332 aa16.43■□□□□ 0.22
SSR1P1-201ENST00000407630 KIAA1468Q9P260 1216 aa16.43■□□□□ 0.22
SSR1P1-201ENST00000407630 PALM3A6NDB9 673 aaPredicted RBP16.42■□□□□ 0.22
SSR1P1-201ENST00000407630 CFAP99D6REC4 459 aa16.42■□□□□ 0.22
SSR1P1-201ENST00000407630 EPS8L1Q8TE68 723 aa16.4■□□□□ 0.22
SSR1P1-201ENST00000407630 LMOD1P29536 600 aaPredicted RBP16.39■□□□□ 0.21
SSR1P1-201ENST00000407630 C6orf229H3BNL8 230 aa16.38■□□□□ 0.21
SSR1P1-201ENST00000407630 UCN2Q96RP3 112 aa16.37■□□□□ 0.21
SSR1P1-201ENST00000407630 SOX11P35716 441 aa16.36■□□□□ 0.21
SSR1P1-201ENST00000407630 KCNH8Q96L42 1107 aa16.36■□□□□ 0.21
SSR1P1-201ENST00000407630 ZBED2Q9BTP6 218 aa16.36■□□□□ 0.21
SSR1P1-201ENST00000407630 TFIP11Q9UBB9 837 aaKnown RBP16.36■□□□□ 0.21
SSR1P1-201ENST00000407630 CARNS1A5YM72 827 aa16.35■□□□□ 0.21
SSR1P1-201ENST00000407630 FOXD4L5Q5VV16 416 aaPredicted RBP16.35■□□□□ 0.21
SSR1P1-201ENST00000407630 PRR7Q8TB68 274 aa16.35■□□□□ 0.21
SSR1P1-201ENST00000407630 FOXD4L4Q8WXT5 416 aaPredicted RBP16.35■□□□□ 0.21
SSR1P1-201ENST00000407630 GRIPAP1Q4V328 841 aa16.34■□□□□ 0.21
SSR1P1-201ENST00000407630 FUT2Q10981 343 aa16.33■□□□□ 0.2
SSR1P1-201ENST00000407630 HOXB1P14653 301 aaPredicted RBP16.32■□□□□ 0.2
SSR1P1-201ENST00000407630 SLF2Q8IX21 1173 aa16.32■□□□□ 0.2
SSR1P1-201ENST00000407630 SEMA3FQ13275 785 aa16.3■□□□□ 0.2
SSR1P1-201ENST00000407630 NR6A1Q15406 480 aa16.3■□□□□ 0.2
SSR1P1-201ENST00000407630 SEPT9Q9UHD8 586 aaPredicted RBP16.3■□□□□ 0.2
SSR1P1-201ENST00000407630 ATG7O95352 703 aa16.29■□□□□ 0.2
SSR1P1-201ENST00000407630 SLC4A3P48751 1232 aa16.29■□□□□ 0.2
SSR1P1-201ENST00000407630 HDGFP51858 240 aaKnown RBP16.29■□□□□ 0.2
SSR1P1-201ENST00000407630 SYMPKQ92797 1274 aaKnown RBP16.29■□□□□ 0.2
SSR1P1-201ENST00000407630 RABGEF1Q9UJ41 708 aa16.29■□□□□ 0.2
SSR1P1-201ENST00000407630 CDCA8Q53HL2 280 aa16.28■□□□□ 0.2
SSR1P1-201ENST00000407630 SCUBE2Q9NQ36 999 aa16.28■□□□□ 0.2
SSR1P1-201ENST00000407630 MAFBQ9Y5Q3 323 aaPredicted RBP16.28■□□□□ 0.2
SSR1P1-201ENST00000407630 CFHP08603 1231 aa16.27■□□□□ 0.2
SSR1P1-201ENST00000407630 VRTNQ9H8Y1 702 aa16.27■□□□□ 0.2
SSR1P1-201ENST00000407630 POTEB2H3BUK9 544 aa16.26■□□□□ 0.19
SSR1P1-201ENST00000407630 PER1O15534 1290 aaPredicted RBP16.25■□□□□ 0.19
SSR1P1-201ENST00000407630 ATP6V1AP38606 617 aa16.25■□□□□ 0.19
SSR1P1-201ENST00000407630 TMEM88BA6NKF7 163 aa16.24■□□□□ 0.19
SSR1P1-201ENST00000407630 RBM25P49756 843 aaKnown RBP16.24■□□□□ 0.19
SSR1P1-201ENST00000407630 PSEN2P49810 448 aa16.24■□□□□ 0.19
SSR1P1-201ENST00000407630 TBC1D9Q6ZT07 1266 aa16.24■□□□□ 0.19
SSR1P1-201ENST00000407630 PNMA1Q8ND90 353 aa16.24■□□□□ 0.19
SSR1P1-201ENST00000407630 IVNS1ABPQ9Y6Y0 642 aa16.24■□□□□ 0.19
SSR1P1-201ENST00000407630 ZNF428Q96B54 188 aa16.23■□□□□ 0.19
SSR1P1-201ENST00000407630 FAM98CQ17RN3 349 aaKnown RBP16.22■□□□□ 0.19
SSR1P1-201ENST00000407630 SNPHO15079 494 aa16.21■□□□□ 0.19
SSR1P1-201ENST00000407630 EIF4G2P78344 907 aaKnown RBP eCLIP16.21■□□□□ 0.19
SSR1P1-201ENST00000407630 MAMSTRQ6ZN01 415 aa16.21■□□□□ 0.19
SSR1P1-201ENST00000407630 ATP9BO43861 1147 aa16.19■□□□□ 0.18
SSR1P1-201ENST00000407630 SAMD7Q7Z3H4 446 aa16.19■□□□□ 0.18
SSR1P1-201ENST00000407630 RETREG3Q86VR2 466 aa16.19■□□□□ 0.18
SSR1P1-201ENST00000407630 SP7Q8TDD2 431 aaPredicted RBP16.19■□□□□ 0.18
SSR1P1-201ENST00000407630 SLC4A5Q9BY07 1137 aa16.18■□□□□ 0.18
SSR1P1-201ENST00000407630 CCDC27Q2M243 656 aa16.17■□□□□ 0.18
SSR1P1-201ENST00000407630 SND1Q7KZF4 910 aaKnown RBP eCLIP16.16■□□□□ 0.18
SSR1P1-201ENST00000407630 NR1H3Q13133 447 aa16.15■□□□□ 0.18
SSR1P1-201ENST00000407630 DESI1Q6ICB0 168 aa16.15■□□□□ 0.18
SSR1P1-201ENST00000407630 RNF40O75150 1001 aa16.14■□□□□ 0.17
SSR1P1-201ENST00000407630 KMT5BQ4FZB7 885 aa16.14■□□□□ 0.17
SSR1P1-201ENST00000407630 ARHGAP33O14559 1287 aa16.13■□□□□ 0.17
SSR1P1-201ENST00000407630 MORN1Q5T089 497 aa16.12■□□□□ 0.17
SSR1P1-201ENST00000407630 LYPD8Q6UX82 237 aa16.11■□□□□ 0.17
SSR1P1-201ENST00000407630 FBXO45P0C2W1 286 aa16.1■□□□□ 0.17
SSR1P1-201ENST00000407630 Q3C1V9 767 aa16.1■□□□□ 0.17
SSR1P1-201ENST00000407630 KANK4Q5T7N3 995 aaPredicted RBP16.1■□□□□ 0.17
SSR1P1-201ENST00000407630 DMRTA1Q5VZB9 504 aa16.1■□□□□ 0.17
SSR1P1-201ENST00000407630 SLC27A5Q9Y2P5 690 aa16.1■□□□□ 0.17
SSR1P1-201ENST00000407630 PUS10Q3MIT2 529 aaKnown RBP16.09■□□□□ 0.17
SSR1P1-201ENST00000407630 B4GALNT3Q6L9W6 998 aa16.09■□□□□ 0.17
SSR1P1-201ENST00000407630 POTEHQ6S545 545 aa16.09■□□□□ 0.17
SSR1P1-201ENST00000407630 POTEEQ6S8J3 1075 aa16.09■□□□□ 0.17
SSR1P1-201ENST00000407630 PIK3CDO00329 1044 aa16.08■□□□□ 0.16
SSR1P1-201ENST00000407630 ELOAQ14241 798 aaKnown RBP16.08■□□□□ 0.16
SSR1P1-201ENST00000407630 LAPTM4BQ86VI4 370 aa16.08■□□□□ 0.16
SSR1P1-201ENST00000407630 GNEQ9Y223 722 aaKnown RBP16.08■□□□□ 0.16
SSR1P1-201ENST00000407630 ZBBXA8MT70 800 aa16.07■□□□□ 0.16
SSR1P1-201ENST00000407630 E9PSI1 815 aa16.06■□□□□ 0.16
SSR1P1-201ENST00000407630 ZMIZ1Q9ULJ6 1067 aa16.06■□□□□ 0.16
SSR1P1-201ENST00000407630 VPS9D1Q9Y2B5 631 aa16.06■□□□□ 0.16
SSR1P1-201ENST00000407630 ACTN4O43707 911 aaKnown RBP16.05■□□□□ 0.16
SSR1P1-201ENST00000407630 NFATC2IPQ8NCF5 419 aa16.05■□□□□ 0.16
SSR1P1-201ENST00000407630 AMOTL2Q9Y2J4 779 aa16.05■□□□□ 0.16
SSR1P1-201ENST00000407630 TMEM164Q5U3C3 297 aa16.04■□□□□ 0.16
SSR1P1-201ENST00000407630 FKBPLQ9UIM3 349 aa16.04■□□□□ 0.16
SSR1P1-201ENST00000407630 AXIN2Q9Y2T1 843 aa16.04■□□□□ 0.16
SSR1P1-201ENST00000407630 STK32AQ8WU08 396 aa16.03■□□□□ 0.16
SSR1P1-201ENST00000407630 USP17L3A6NCW0 530 aa16.02■□□□□ 0.16
SSR1P1-201ENST00000407630 USP17L4A6NCW7 530 aa16.02■□□□□ 0.16
SSR1P1-201ENST00000407630 USP17L2Q6R6M4 530 aa16.02■□□□□ 0.16
SSR1P1-201ENST00000407630 USP17L1Q7RTZ2 530 aa16.02■□□□□ 0.16
SSR1P1-201ENST00000407630 NBPF3Q9H094 633 aa16.02■□□□□ 0.16
SSR1P1-201ENST00000407630 RNF19BQ6ZMZ0 732 aa16.01■□□□□ 0.15
SSR1P1-201ENST00000407630 NOVA2Q9UNW9 492 aaKnown RBP16.01■□□□□ 0.15
SSR1P1-201ENST00000407630 SKIP12755 728 aa16■□□□□ 0.15
SSR1P1-201ENST00000407630 ZFRQ96KR1 1074 aaKnown RBP16■□□□□ 0.15
SSR1P1-201ENST00000407630 USP17L5A8MUK1 530 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms