RNA–Protein interactions for RNA: ENST00000407263.2

TSPAN9-202, Transcript of tetraspanin 9, humanhuman

TSL 5 BASIC

Gene TSPAN9, Length 956 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-202ENST00000407263 WAPLQ7Z5K2 1190 aa14.81□□□□□ -0.04
TSPAN9-202ENST00000407263 STAC3Q96MF2 364 aa14.81□□□□□ -0.04
TSPAN9-202ENST00000407263 COL16A1Q07092 1604 aaPredicted RBP14.81□□□□□ -0.04
TSPAN9-202ENST00000407263 USP32Q8NFA0 1604 aa14.81□□□□□ -0.04
TSPAN9-202ENST00000407263 ITSN1Q15811 1721 aa14.8□□□□□ -0.04
TSPAN9-202ENST00000407263 ATF3P18847 181 aa14.8□□□□□ -0.04
TSPAN9-202ENST00000407263 SAFB2Q14151 953 aaKnown RBP eCLIP14.8□□□□□ -0.04
TSPAN9-202ENST00000407263 TRAK1Q9UPV9 953 aa14.8□□□□□ -0.04
TSPAN9-202ENST00000407263 AHDC1Q5TGY3 1603 aaPredicted RBP14.8□□□□□ -0.04
TSPAN9-202ENST00000407263 KIF1AQ12756 1690 aa14.79□□□□□ -0.04
TSPAN9-202ENST00000407263 RALGAPBQ86X10 1494 aa14.79□□□□□ -0.04
TSPAN9-202ENST00000407263 C19orf44Q9H6X5 657 aa14.79□□□□□ -0.04
TSPAN9-202ENST00000407263 NBPF1Q3BBV0 1214 aa14.78□□□□□ -0.04
TSPAN9-202ENST00000407263 CADPS2Q86UW7 1296 aa14.78□□□□□ -0.04
TSPAN9-202ENST00000407263 CCER1Q8TC90 406 aaPredicted RBP14.78□□□□□ -0.04
TSPAN9-202ENST00000407263 PRAM1Q96QH2 718 aa14.78□□□□□ -0.04
TSPAN9-202ENST00000407263 ROCK2O75116 1388 aaKnown RBP14.77□□□□□ -0.04
TSPAN9-202ENST00000407263 HSPA1LP34931 641 aa14.77□□□□□ -0.05
TSPAN9-202ENST00000407263 TOPAZ1Q8N9V7 1692 aa14.77□□□□□ -0.05
TSPAN9-202ENST00000407263 C1orf167Q5SNV9 1468 aa14.76□□□□□ -0.05
TSPAN9-202ENST00000407263 SLAIN2Q9P270 581 aa14.76□□□□□ -0.05
TSPAN9-202ENST00000407263 NBPF8Q3BBV2 869 aa14.75□□□□□ -0.05
TSPAN9-202ENST00000407263 POGKQ9P215 609 aa14.75□□□□□ -0.05
TSPAN9-202ENST00000407263 SHPRHQ149N8 1683 aa14.74□□□□□ -0.05
TSPAN9-202ENST00000407263 MINK1Q8N4C8 1332 aaPredicted RBP14.73□□□□□ -0.05
TSPAN9-202ENST00000407263 CLSPNQ9HAW4 1339 aa14.73□□□□□ -0.05
TSPAN9-202ENST00000407263 TULP4Q9NRJ4 1543 aa14.73□□□□□ -0.05
TSPAN9-202ENST00000407263 NUTM2FA1L443 756 aa14.73□□□□□ -0.05
TSPAN9-202ENST00000407263 MED1Q15648 1581 aaPredicted RBP14.73□□□□□ -0.05
TSPAN9-202ENST00000407263 HIRIP3Q9BW71 556 aaPredicted RBP14.72□□□□□ -0.05
TSPAN9-202ENST00000407263 BRINP3Q76B58 766 aa14.71□□□□□ -0.05
TSPAN9-202ENST00000407263 SIRT1Q96EB6 747 aa14.7□□□□□ -0.06
TSPAN9-202ENST00000407263 GPRASP1Q5JY77 1395 aa14.7□□□□□ -0.06
TSPAN9-202ENST00000407263 ATP7BP35670 1465 aa14.69□□□□□ -0.06
TSPAN9-202ENST00000407263 DDX17Q92841 729 aaKnown RBP14.68□□□□□ -0.06
TSPAN9-202ENST00000407263 EIF3AQ14152 1382 aaKnown RBP14.68□□□□□ -0.06
TSPAN9-202ENST00000407263 CENPJQ9HC77 1338 aaPredicted RBP14.67□□□□□ -0.06
TSPAN9-202ENST00000407263 ANKARQ7Z5J8 1434 aa14.67□□□□□ -0.06
TSPAN9-202ENST00000407263 ORAI2Q96SN7 254 aa14.67□□□□□ -0.06
TSPAN9-202ENST00000407263 ABCA3Q99758 1704 aa14.66□□□□□ -0.06
TSPAN9-202ENST00000407263 TRPM3Q9HCF6 1732 aaPredicted RBP14.66□□□□□ -0.06
TSPAN9-202ENST00000407263 PXDNQ92626 1479 aa14.65□□□□□ -0.06
TSPAN9-202ENST00000407263 ESCO1Q5FWF5 840 aa14.65□□□□□ -0.06
TSPAN9-202ENST00000407263 CARD11Q9BXL7 1154 aa14.65□□□□□ -0.06
TSPAN9-202ENST00000407263 MARF1Q9Y4F3 1742 aaKnown RBP14.64□□□□□ -0.07
TSPAN9-202ENST00000407263 COL22A1Q8NFW1 1626 aaPredicted RBP14.64□□□□□ -0.07
TSPAN9-202ENST00000407263 AKAP12Q02952 1782 aa14.64□□□□□ -0.07
TSPAN9-202ENST00000407263 PRR36Q9H6K5 1346 aa14.64□□□□□ -0.07
TSPAN9-202ENST00000407263 WASLO00401 505 aaPredicted RBP14.62□□□□□ -0.07
TSPAN9-202ENST00000407263 XPCQ01831 940 aaPredicted RBP14.62□□□□□ -0.07
TSPAN9-202ENST00000407263 ALS2Q96Q42 1657 aa14.61□□□□□ -0.07
TSPAN9-202ENST00000407263 JCADQ9P266 1359 aa14.61□□□□□ -0.07
TSPAN9-202ENST00000407263 LRP6O75581 1613 aa14.61□□□□□ -0.07
TSPAN9-202ENST00000407263 CRYBG1Q9Y4K1 1723 aa14.6□□□□□ -0.07
TSPAN9-202ENST00000407263 MON2Q7Z3U7 1717 aa14.59□□□□□ -0.07
TSPAN9-202ENST00000407263 PHF8Q9UPP1 1060 aa14.59□□□□□ -0.07
TSPAN9-202ENST00000407263 NPHP3Q7Z494 1330 aa14.59□□□□□ -0.07
TSPAN9-202ENST00000407263 USP47Q96K76 1375 aa14.59□□□□□ -0.07
TSPAN9-202ENST00000407263 FOXO3O43524 673 aa14.58□□□□□ -0.08
TSPAN9-202ENST00000407263 PMFBP1Q8TBY8 1022 aa14.58□□□□□ -0.08
TSPAN9-202ENST00000407263 CDK19Q9BWU1 502 aa14.58□□□□□ -0.08
TSPAN9-202ENST00000407263 TIMELESSQ9UNS1 1208 aa14.58□□□□□ -0.08
TSPAN9-202ENST00000407263 NRKQ7Z2Y5 1582 aa14.58□□□□□ -0.08
TSPAN9-202ENST00000407263 PNPLA6Q8IY17 1366 aa14.58□□□□□ -0.08
TSPAN9-202ENST00000407263 PPIP5K1Q6PFW1 1433 aa14.58□□□□□ -0.08
TSPAN9-202ENST00000407263 PHRF1Q9P1Y6 1649 aaKnown RBP14.57□□□□□ -0.08
TSPAN9-202ENST00000407263 SLC24A1O60721 1099 aa14.57□□□□□ -0.08
TSPAN9-202ENST00000407263 SRPK2P78362 688 aaKnown RBP14.57□□□□□ -0.08
TSPAN9-202ENST00000407263 MYOM1P52179 1685 aa14.57□□□□□ -0.08
TSPAN9-202ENST00000407263 SOS2Q07890 1332 aaPredicted RBP14.57□□□□□ -0.08
TSPAN9-202ENST00000407263 CABP2Q9NPB3 220 aa14.56□□□□□ -0.08
TSPAN9-202ENST00000407263 SBNO2Q9Y2G9 1366 aa14.56□□□□□ -0.08
TSPAN9-202ENST00000407263 TNS3Q68CZ2 1445 aa14.56□□□□□ -0.08
TSPAN9-202ENST00000407263 NUDT16Q96DE0 195 aaKnown RBP14.55□□□□□ -0.08
TSPAN9-202ENST00000407263 EVC2Q86UK5 1308 aa14.55□□□□□ -0.08
TSPAN9-202ENST00000407263 DISP3Q9P2K9 1392 aa14.55□□□□□ -0.08
TSPAN9-202ENST00000407263 PLCH1Q4KWH8 1693 aa14.53□□□□□ -0.08
TSPAN9-202ENST00000407263 PIK3C2AO00443 1686 aa14.52□□□□□ -0.08
TSPAN9-202ENST00000407263 NUTM2BA6NNL0 878 aaPredicted RBP14.52□□□□□ -0.09
TSPAN9-202ENST00000407263 NUTM2EB1AL46 878 aaPredicted RBP14.52□□□□□ -0.09
TSPAN9-202ENST00000407263 NUTM2AQ8IVF1 878 aaPredicted RBP14.52□□□□□ -0.09
TSPAN9-202ENST00000407263 LRRC59Q96AG4 307 aaKnown RBP14.52□□□□□ -0.09
TSPAN9-202ENST00000407263 SPATA31A6Q5VVP1 1343 aa14.51□□□□□ -0.09
TSPAN9-202ENST00000407263 ST20-MTHFSA0A0A6YYL1 179 aa14.51□□□□□ -0.09
TSPAN9-202ENST00000407263 PLEKHG5O94827 1062 aa14.51□□□□□ -0.09
TSPAN9-202ENST00000407263 KRT28Q7Z3Y7 464 aa14.51□□□□□ -0.09
TSPAN9-202ENST00000407263 NGDNQ8NEJ9 315 aaKnown RBP14.51□□□□□ -0.09
TSPAN9-202ENST00000407263 POLR3AO14802 1390 aaPredicted RBP14.5□□□□□ -0.09
TSPAN9-202ENST00000407263 PHF23Q9BUL5 403 aaPredicted RBP14.5□□□□□ -0.09
TSPAN9-202ENST00000407263 SBNO1A3KN83 1393 aa14.49□□□□□ -0.09
TSPAN9-202ENST00000407263 ATAD2Q6PL18 1390 aa14.49□□□□□ -0.09
TSPAN9-202ENST00000407263 ACEP12821 1306 aa14.49□□□□□ -0.09
TSPAN9-202ENST00000407263 SPATA31A3Q5VYP0 1347 aa14.49□□□□□ -0.09
TSPAN9-202ENST00000407263 PSME1Q06323 249 aa14.49□□□□□ -0.09
TSPAN9-202ENST00000407263 MEX3CQ5U5Q3 659 aaKnown RBP14.49□□□□□ -0.09
TSPAN9-202ENST00000407263 CCDC61Q9Y6R9 512 aa14.49□□□□□ -0.09
TSPAN9-202ENST00000407263 KIF20BQ96Q89 1820 aa14.48□□□□□ -0.09
TSPAN9-202ENST00000407263 LMOD2Q6P5Q4 547 aa14.48□□□□□ -0.09
TSPAN9-202ENST00000407263 TESK2Q96S53 571 aa14.48□□□□□ -0.09
TSPAN9-202ENST00000407263 USP6P35125 1406 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms