RNA–Protein interactions for RNA: ENST00000406451.8

HDAC9-204, Transcript of histone deacetylase 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HDAC9, Length 9,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-204ENST00000406451 KIF6Q6ZMV9 814 aa6.15□□□□□ -1.42
HDAC9-204ENST00000406451 RILPL2Q969X0 211 aa6.15□□□□□ -1.42
HDAC9-204ENST00000406451 NOP58Q9Y2X3 529 aaKnown RBP6.15□□□□□ -1.42
HDAC9-204ENST00000406451 TCERG1O14776 1098 aaKnown RBP6.15□□□□□ -1.42
HDAC9-204ENST00000406451 IFIT2P09913 472 aaKnown RBP6.15□□□□□ -1.43
HDAC9-204ENST00000406451 DIAPH3Q9NSV4 1193 aa6.15□□□□□ -1.43
HDAC9-204ENST00000406451 CNTLNQ9NXG0 1405 aa6.15□□□□□ -1.43
HDAC9-204ENST00000406451 MARCH6O60337 910 aa6.15□□□□□ -1.43
HDAC9-204ENST00000406451 MTHFSP49914 203 aa6.15□□□□□ -1.43
HDAC9-204ENST00000406451 RBM42Q9BTD8 480 aaKnown RBP6.15□□□□□ -1.43
HDAC9-204ENST00000406451 CABP1Q9NZU7 370 aa6.15□□□□□ -1.43
HDAC9-204ENST00000406451 KIF16BQ96L93 1317 aa6.15□□□□□ -1.43
HDAC9-204ENST00000406451 AIMP1Q12904 312 aaKnown RBP6.15□□□□□ -1.43
HDAC9-204ENST00000406451 ATAD2Q6PL18 1390 aa6.15□□□□□ -1.43
HDAC9-204ENST00000406451 ANKRD45Q5TZF3 282 aa6.14□□□□□ -1.43
HDAC9-204ENST00000406451 DDX19BQ9UMR2 479 aa6.14□□□□□ -1.43
HDAC9-204ENST00000406451 ZBED9Q6R2W3 1325 aa6.14□□□□□ -1.43
HDAC9-204ENST00000406451 GBP4Q96PP9 640 aa6.14□□□□□ -1.43
HDAC9-204ENST00000406451 SPG7Q9UQ90 795 aa6.14□□□□□ -1.43
HDAC9-204ENST00000406451 AKAP17AQ02040 695 aaKnown RBP6.14□□□□□ -1.43
HDAC9-204ENST00000406451 NBPF1Q3BBV0 1214 aa6.14□□□□□ -1.43
HDAC9-204ENST00000406451 RUFY2Q8WXA3 655 aa6.14□□□□□ -1.43
HDAC9-204ENST00000406451 RAD21O60216 631 aa6.14□□□□□ -1.43
HDAC9-204ENST00000406451 XPCQ01831 940 aaPredicted RBP6.13□□□□□ -1.43
HDAC9-204ENST00000406451 ST18O60284 1047 aa6.13□□□□□ -1.43
HDAC9-204ENST00000406451 PPP1R1BQ9UD71 204 aaPredicted RBP6.13□□□□□ -1.43
HDAC9-204ENST00000406451 CFAP65Q6ZU64 1925 aaKnown RBP6.13□□□□□ -1.43
HDAC9-204ENST00000406451 APPP05067 770 aa6.13□□□□□ -1.43
HDAC9-204ENST00000406451 DRC7Q8IY82 874 aa6.13□□□□□ -1.43
HDAC9-204ENST00000406451 CHMP4CQ96CF2 233 aa6.13□□□□□ -1.43
HDAC9-204ENST00000406451 CABP4P57796 275 aa6.13□□□□□ -1.43
HDAC9-204ENST00000406451 NCBP3Q53F19 620 aaKnown RBP6.13□□□□□ -1.43
HDAC9-204ENST00000406451 SYNE3Q6ZMZ3 975 aa6.13□□□□□ -1.43
HDAC9-204ENST00000406451 NOL8Q76FK4 1167 aaKnown RBP6.13□□□□□ -1.43
HDAC9-204ENST00000406451 DZIP1LQ8IYY4 767 aaKnown RBP6.13□□□□□ -1.43
HDAC9-204ENST00000406451 PTMSP20962 102 aa6.13□□□□□ -1.43
HDAC9-204ENST00000406451 CHAF1AQ13111 956 aaPredicted RBP6.13□□□□□ -1.43
HDAC9-204ENST00000406451 ZNF530Q6P9A1 599 aaPredicted RBP6.13□□□□□ -1.43
HDAC9-204ENST00000406451 ASXL2Q76L83 1435 aa6.13□□□□□ -1.43
HDAC9-204ENST00000406451 DDX54Q8TDD1 881 aaKnown RBP6.13□□□□□ -1.43
HDAC9-204ENST00000406451 HMGB2P26583 209 aaKnown RBP6.13□□□□□ -1.43
HDAC9-204ENST00000406451 TCEAL9Q9UHQ7 104 aa6.13□□□□□ -1.43
HDAC9-204ENST00000406451 HSP90AB4PQ58FF6 505 aa6.13□□□□□ -1.43
HDAC9-204ENST00000406451 PPP6R1Q9UPN7 881 aa6.13□□□□□ -1.43
HDAC9-204ENST00000406451 PBRM1Q86U86 1689 aa6.13□□□□□ -1.43
HDAC9-204ENST00000406451 KIAA2012Q0VF49 1180 aa6.13□□□□□ -1.43
HDAC9-204ENST00000406451 PRKAR2BP31323 418 aa6.12□□□□□ -1.43
HDAC9-204ENST00000406451 CWC22Q9HCG8 908 aaKnown RBP6.12□□□□□ -1.43
HDAC9-204ENST00000406451 CCDC30Q5VVM6 783 aa6.12□□□□□ -1.43
HDAC9-204ENST00000406451 SLC12A5Q9H2X9 1139 aa6.12□□□□□ -1.43
HDAC9-204ENST00000406451 COG6Q9Y2V7 657 aa6.12□□□□□ -1.43
HDAC9-204ENST00000406451 CSPP1Q1MSJ5 1256 aa6.12□□□□□ -1.43
HDAC9-204ENST00000406451 THOC2Q8NI27 1593 aaKnown RBP6.12□□□□□ -1.43
HDAC9-204ENST00000406451 BRD4O60885 1362 aaPredicted RBP6.12□□□□□ -1.43
HDAC9-204ENST00000406451 SYAP1Q96A49 352 aaPredicted RBP6.12□□□□□ -1.43
HDAC9-204ENST00000406451 UBTFL1P0CB47 393 aaPredicted RBP6.11□□□□□ -1.43
HDAC9-204ENST00000406451 EIF4G3O43432 1585 aaKnown RBP6.11□□□□□ -1.43
HDAC9-204ENST00000406451 ADAMTS12P58397 1594 aa6.11□□□□□ -1.43
HDAC9-204ENST00000406451 PLIN1O60240 522 aa6.11□□□□□ -1.43
HDAC9-204ENST00000406451 CENPQQ7L2Z9 268 aaPredicted RBP6.11□□□□□ -1.43
HDAC9-204ENST00000406451 CEBPAP49715 358 aaPredicted RBP6.11□□□□□ -1.43
HDAC9-204ENST00000406451 RRP1P56182 461 aaKnown RBP6.11□□□□□ -1.43
HDAC9-204ENST00000406451 CCDC61Q9Y6R9 512 aa6.11□□□□□ -1.43
HDAC9-204ENST00000406451 FAM177BA6PVY3 158 aa6.11□□□□□ -1.43
HDAC9-204ENST00000406451 SULT6B1Q6IMI4 303 aa6.11□□□□□ -1.43
HDAC9-204ENST00000406451 NUDT16Q96DE0 195 aaKnown RBP6.11□□□□□ -1.43
HDAC9-204ENST00000406451 ERC2O15083 957 aa6.11□□□□□ -1.43
HDAC9-204ENST00000406451 KCNH5Q8NCM2 988 aa6.11□□□□□ -1.43
HDAC9-204ENST00000406451 L1TD1Q5T7N2 865 aaKnown RBP6.11□□□□□ -1.43
HDAC9-204ENST00000406451 TRDNQ13061 729 aa6.1□□□□□ -1.43
HDAC9-204ENST00000406451 CPLX2Q6PUV4 134 aaKnown RBP6.1□□□□□ -1.43
HDAC9-204ENST00000406451 WDR7Q9Y4E6 1490 aa6.1□□□□□ -1.43
HDAC9-204ENST00000406451 H3BQV1 296 aa6.1□□□□□ -1.43
HDAC9-204ENST00000406451 IFFO2Q5TF58 517 aa6.1□□□□□ -1.43
HDAC9-204ENST00000406451 NEUROD6Q96NK8 337 aa6.1□□□□□ -1.43
HDAC9-204ENST00000406451 DHX16O60231 1041 aaKnown RBP6.1□□□□□ -1.43
HDAC9-204ENST00000406451 SLKQ9H2G2 1235 aaPredicted RBP6.1□□□□□ -1.43
HDAC9-204ENST00000406451 TPM4P67936 248 aa6.1□□□□□ -1.43
HDAC9-204ENST00000406451 PNISRQ8TF01 805 aaKnown RBP6.1□□□□□ -1.43
HDAC9-204ENST00000406451 LRPPRCP42704 1394 aaKnown RBP6.1□□□□□ -1.43
HDAC9-204ENST00000406451 ZKSCAN1P17029 563 aaPredicted RBP6.1□□□□□ -1.43
HDAC9-204ENST00000406451 ZC3H6P61129 1189 aaKnown RBP6.1□□□□□ -1.43
HDAC9-204ENST00000406451 ABCC5O15440 1437 aa6.1□□□□□ -1.43
HDAC9-204ENST00000406451 KDM5BQ9UGL1 1544 aa6.1□□□□□ -1.43
HDAC9-204ENST00000406451 REC8O95072 547 aa6.1□□□□□ -1.43
HDAC9-204ENST00000406451 PPP2R1AP30153 589 aa6.1□□□□□ -1.43
HDAC9-204ENST00000406451 SF3A1Q15459 793 aaKnown RBP6.1□□□□□ -1.43
HDAC9-204ENST00000406451 FBXO31Q5XUX0 539 aaPredicted RBP6.1□□□□□ -1.43
HDAC9-204ENST00000406451 TNRQ92752 1358 aa6.1□□□□□ -1.43
HDAC9-204ENST00000406451 NAIPQ13075 1403 aa6.1□□□□□ -1.43
HDAC9-204ENST00000406451 TCP11L2Q8N4U5 519 aa6.1□□□□□ -1.43
HDAC9-204ENST00000406451 FAM184AQ8NB25 1140 aa6.09□□□□□ -1.43
HDAC9-204ENST00000406451 CRBNQ96SW2 442 aa6.09□□□□□ -1.43
HDAC9-204ENST00000406451 AMOTL2Q9Y2J4 779 aa6.09□□□□□ -1.43
HDAC9-204ENST00000406451 CCDC27Q2M243 656 aa6.09□□□□□ -1.43
HDAC9-204ENST00000406451 WWC1Q8IX03 1113 aa6.09□□□□□ -1.43
HDAC9-204ENST00000406451 RNF20Q5VTR2 975 aa6.09□□□□□ -1.43
HDAC9-204ENST00000406451 ADAMTS2O95450 1211 aa6.09□□□□□ -1.44
HDAC9-204ENST00000406451 ADAMTS8Q9UP79 889 aa6.09□□□□□ -1.44
HDAC9-204ENST00000406451 RRS1Q15050 365 aaKnown RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms