RNA–Protein interactions for RNA: ENST00000406256.7

GDPD3-202, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDPD3, Length 1,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-202ENST00000406256 C14orf37Q86TY3 774 aa22.87■■□□□ 1.25
GDPD3-202ENST00000406256 PIP4K2BP78356 416 aa22.86■■□□□ 1.25
GDPD3-202ENST00000406256 TRAK1Q9UPV9 953 aa22.86■■□□□ 1.25
GDPD3-202ENST00000406256 GPRASP1Q5JY77 1395 aa22.85■■□□□ 1.25
GDPD3-202ENST00000406256 RALGAPBQ86X10 1494 aa22.85■■□□□ 1.25
GDPD3-202ENST00000406256 CCER1Q8TC90 406 aaPredicted RBP22.84■■□□□ 1.25
GDPD3-202ENST00000406256 PRAM1Q96QH2 718 aa22.84■■□□□ 1.25
GDPD3-202ENST00000406256 CADPS2Q86UW7 1296 aa22.83■■□□□ 1.25
GDPD3-202ENST00000406256 SLAIN2Q9P270 581 aa22.83■■□□□ 1.25
GDPD3-202ENST00000406256 RGPD8O14715 1765 aaPredicted RBP22.82■■□□□ 1.24
GDPD3-202ENST00000406256 ATF3P18847 181 aa22.81■■□□□ 1.24
GDPD3-202ENST00000406256 USP32Q8NFA0 1604 aa22.8■■□□□ 1.24
GDPD3-202ENST00000406256 C1orf167Q5SNV9 1468 aa22.8■■□□□ 1.24
GDPD3-202ENST00000406256 QRICH2Q9H0J4 1663 aa22.79■■□□□ 1.24
GDPD3-202ENST00000406256 SCAF1Q9H7N4 1312 aaKnown RBP22.79■■□□□ 1.24
GDPD3-202ENST00000406256 NHSL1Q5SYE7 1610 aa22.79■■□□□ 1.24
GDPD3-202ENST00000406256 ROCK2O75116 1388 aaKnown RBP22.79■■□□□ 1.24
GDPD3-202ENST00000406256 SAFB2Q14151 953 aaKnown RBP eCLIP22.77■■□□□ 1.24
GDPD3-202ENST00000406256 TIMELESSQ9UNS1 1208 aa22.77■■□□□ 1.24
GDPD3-202ENST00000406256 AHDC1Q5TGY3 1603 aaPredicted RBP22.77■■□□□ 1.23
GDPD3-202ENST00000406256 HSPA1LP34931 641 aa22.76■■□□□ 1.23
GDPD3-202ENST00000406256 COL16A1Q07092 1604 aaPredicted RBP22.75■■□□□ 1.23
GDPD3-202ENST00000406256 PHLPP1O60346 1717 aa22.75■■□□□ 1.23
GDPD3-202ENST00000406256 BRINP3Q76B58 766 aa22.75■■□□□ 1.23
GDPD3-202ENST00000406256 POGKQ9P215 609 aa22.75■■□□□ 1.23
GDPD3-202ENST00000406256 MINK1Q8N4C8 1332 aaPredicted RBP22.71■■□□□ 1.23
GDPD3-202ENST00000406256 HIRIP3Q9BW71 556 aaPredicted RBP22.7■■□□□ 1.22
GDPD3-202ENST00000406256 TULP4Q9NRJ4 1543 aa22.69■■□□□ 1.22
GDPD3-202ENST00000406256 ORAI2Q96SN7 254 aa22.69■■□□□ 1.22
GDPD3-202ENST00000406256 CENPJQ9HC77 1338 aaPredicted RBP22.68■■□□□ 1.22
GDPD3-202ENST00000406256 TOPAZ1Q8N9V7 1692 aa22.68■■□□□ 1.22
GDPD3-202ENST00000406256 KIF1AQ12756 1690 aa22.67■■□□□ 1.22
GDPD3-202ENST00000406256 ATP7BP35670 1465 aa22.67■■□□□ 1.22
GDPD3-202ENST00000406256 PRR36Q9H6K5 1346 aa22.66■■□□□ 1.22
GDPD3-202ENST00000406256 CARD11Q9BXL7 1154 aa22.66■■□□□ 1.22
GDPD3-202ENST00000406256 ANKARQ7Z5J8 1434 aa22.66■■□□□ 1.22
GDPD3-202ENST00000406256 NUTM2FA1L443 756 aa22.65■■□□□ 1.22
GDPD3-202ENST00000406256 WASLO00401 505 aaPredicted RBP22.65■■□□□ 1.22
GDPD3-202ENST00000406256 ITSN1Q15811 1721 aa22.64■■□□□ 1.22
GDPD3-202ENST00000406256 DDX17Q92841 729 aaKnown RBP22.63■■□□□ 1.21
GDPD3-202ENST00000406256 SBNO2Q9Y2G9 1366 aa22.62■■□□□ 1.21
GDPD3-202ENST00000406256 EIF3AQ14152 1382 aaKnown RBP22.61■■□□□ 1.21
GDPD3-202ENST00000406256 PXDNQ92626 1479 aa22.61■■□□□ 1.21
GDPD3-202ENST00000406256 SHPRHQ149N8 1683 aa22.6■■□□□ 1.21
GDPD3-202ENST00000406256 ESCO1Q5FWF5 840 aa22.59■■□□□ 1.21
GDPD3-202ENST00000406256 CDK19Q9BWU1 502 aa22.59■■□□□ 1.21
GDPD3-202ENST00000406256 SOS2Q07890 1332 aaPredicted RBP22.57■■□□□ 1.2
GDPD3-202ENST00000406256 TRPM3Q9HCF6 1732 aaPredicted RBP22.56■■□□□ 1.2
GDPD3-202ENST00000406256 USP47Q96K76 1375 aa22.54■■□□□ 1.2
GDPD3-202ENST00000406256 TESK2Q96S53 571 aa22.54■■□□□ 1.2
GDPD3-202ENST00000406256 PHF8Q9UPP1 1060 aa22.54■■□□□ 1.2
GDPD3-202ENST00000406256 NUDT16Q96DE0 195 aaKnown RBP22.53■■□□□ 1.2
GDPD3-202ENST00000406256 FOXO3O43524 673 aa22.52■■□□□ 1.2
GDPD3-202ENST00000406256 ST20-MTHFSA0A0A6YYL1 179 aa22.51■■□□□ 1.19
GDPD3-202ENST00000406256 CABP2Q9NPB3 220 aa22.51■■□□□ 1.19
GDPD3-202ENST00000406256 NPHP3Q7Z494 1330 aa22.51■■□□□ 1.19
GDPD3-202ENST00000406256 MED1Q15648 1581 aaPredicted RBP22.51■■□□□ 1.19
GDPD3-202ENST00000406256 COL22A1Q8NFW1 1626 aaPredicted RBP22.51■■□□□ 1.19
GDPD3-202ENST00000406256 JCADQ9P266 1359 aa22.51■■□□□ 1.19
GDPD3-202ENST00000406256 PMFBP1Q8TBY8 1022 aa22.5■■□□□ 1.19
GDPD3-202ENST00000406256 PNPLA6Q8IY17 1366 aa22.49■■□□□ 1.19
GDPD3-202ENST00000406256 ALS2Q96Q42 1657 aa22.49■■□□□ 1.19
GDPD3-202ENST00000406256 XPCQ01831 940 aaPredicted RBP22.49■■□□□ 1.19
GDPD3-202ENST00000406256 EVC2Q86UK5 1308 aa22.49■■□□□ 1.19
GDPD3-202ENST00000406256 POLR3AO14802 1390 aaPredicted RBP22.48■■□□□ 1.19
GDPD3-202ENST00000406256 LRP6O75581 1613 aa22.47■■□□□ 1.19
GDPD3-202ENST00000406256 AKAP12Q02952 1782 aa22.47■■□□□ 1.19
GDPD3-202ENST00000406256 CCDC61Q9Y6R9 512 aa22.47■■□□□ 1.19
GDPD3-202ENST00000406256 PPIP5K1Q6PFW1 1433 aa22.47■■□□□ 1.19
GDPD3-202ENST00000406256 PLEKHG3A1L390 1219 aa22.46■■□□□ 1.19
GDPD3-202ENST00000406256 SRPK2P78362 688 aaKnown RBP22.46■■□□□ 1.19
GDPD3-202ENST00000406256 LRRC59Q96AG4 307 aaKnown RBP22.45■■□□□ 1.18
GDPD3-202ENST00000406256 DISP3Q9P2K9 1392 aa22.44■■□□□ 1.18
GDPD3-202ENST00000406256 ABCA3Q99758 1704 aa22.44■■□□□ 1.18
GDPD3-202ENST00000406256 CRYBG1Q9Y4K1 1723 aa22.43■■□□□ 1.18
GDPD3-202ENST00000406256 KRT28Q7Z3Y7 464 aa22.43■■□□□ 1.18
GDPD3-202ENST00000406256 TNS3Q68CZ2 1445 aa22.43■■□□□ 1.18
GDPD3-202ENST00000406256 SBNO1A3KN83 1393 aa22.42■■□□□ 1.18
GDPD3-202ENST00000406256 SPATA31A3Q5VYP0 1347 aa22.42■■□□□ 1.18
GDPD3-202ENST00000406256 ACEP12821 1306 aa22.41■■□□□ 1.18
GDPD3-202ENST00000406256 NRKQ7Z2Y5 1582 aa22.41■■□□□ 1.18
GDPD3-202ENST00000406256 MON2Q7Z3U7 1717 aa22.4■■□□□ 1.18
GDPD3-202ENST00000406256 CD163L1Q9NR16 1453 aa22.4■■□□□ 1.18
GDPD3-202ENST00000406256 ATAD2Q6PL18 1390 aa22.4■■□□□ 1.18
GDPD3-202ENST00000406256 MYOM1P52179 1685 aa22.39■■□□□ 1.17
GDPD3-202ENST00000406256 SPATA31A6Q5VVP1 1343 aa22.39■■□□□ 1.17
GDPD3-202ENST00000406256 CABP1Q9NZU7 370 aa22.38■■□□□ 1.17
GDPD3-202ENST00000406256 MARF1Q9Y4F3 1742 aaKnown RBP22.38■■□□□ 1.17
GDPD3-202ENST00000406256 NGDNQ8NEJ9 315 aaKnown RBP22.38■■□□□ 1.17
GDPD3-202ENST00000406256 PUS7Q96PZ0 661 aaKnown RBP22.38■■□□□ 1.17
GDPD3-202ENST00000406256 CPSF1Q10570 1443 aaKnown RBP22.37■■□□□ 1.17
GDPD3-202ENST00000406256 SSH2Q76I76 1423 aa22.37■■□□□ 1.17
GDPD3-202ENST00000406256 HSPA5P11021 654 aaKnown RBP22.37■■□□□ 1.17
GDPD3-202ENST00000406256 PSME1Q06323 249 aa22.37■■□□□ 1.17
GDPD3-202ENST00000406256 USP6P35125 1406 aa22.35■■□□□ 1.17
GDPD3-202ENST00000406256 EIF4G2P78344 907 aaKnown RBP eCLIP22.34■■□□□ 1.17
GDPD3-202ENST00000406256 PIK3C2AO00443 1686 aa22.33■■□□□ 1.17
GDPD3-202ENST00000406256 PHRF1Q9P1Y6 1649 aaKnown RBP22.32■■□□□ 1.16
GDPD3-202ENST00000406256 TMF1P82094 1093 aa22.31■■□□□ 1.16
GDPD3-202ENST00000406256 ARHGEF10O15013 1369 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms