RNA–Protein interactions for RNA: ENST00000405600.5

CGREF1-206, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS P2 TSL 4 BASIC

Gene CGREF1, Length 1,346 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-206ENST00000405600 PRAG1Q86YV5 1406 aa23.75■■□□□ 1.39
CGREF1-206ENST00000405600 NRXN1Q9ULB1 1477 aa23.75■■□□□ 1.39
CGREF1-206ENST00000405600 AHDC1Q5TGY3 1603 aaPredicted RBP23.75■■□□□ 1.39
CGREF1-206ENST00000405600 ZNF316A6NFI3 1004 aaPredicted RBP23.74■■□□□ 1.39
CGREF1-206ENST00000405600 KDM2AQ9Y2K7 1162 aa23.74■■□□□ 1.39
CGREF1-206ENST00000405600 ORAI2Q96SN7 254 aa23.73■■□□□ 1.39
CGREF1-206ENST00000405600 NUTM2FA1L443 756 aa23.72■■□□□ 1.39
CGREF1-206ENST00000405600 CFAP70Q5T0N1 1121 aa23.72■■□□□ 1.39
CGREF1-206ENST00000405600 POTEAQ6S8J7 498 aa23.71■■□□□ 1.39
CGREF1-206ENST00000405600 DCAF11Q8TEB1 546 aa23.71■■□□□ 1.39
CGREF1-206ENST00000405600 C1orf167Q5SNV9 1468 aa23.71■■□□□ 1.39
CGREF1-206ENST00000405600 SPATA31A6Q5VVP1 1343 aa23.7■■□□□ 1.39
CGREF1-206ENST00000405600 LRRC59Q96AG4 307 aaKnown RBP23.7■■□□□ 1.38
CGREF1-206ENST00000405600 C14orf93Q9H972 538 aaKnown RBP23.7■■□□□ 1.38
CGREF1-206ENST00000405600 ESCO1Q5FWF5 840 aa23.68■■□□□ 1.38
CGREF1-206ENST00000405600 LRPPRCP42704 1394 aaKnown RBP23.68■■□□□ 1.38
CGREF1-206ENST00000405600 ABCC11Q96J66 1382 aa23.66■■□□□ 1.38
CGREF1-206ENST00000405600 PLEKHH1Q9ULM0 1364 aa23.66■■□□□ 1.38
CGREF1-206ENST00000405600 SAFB2Q14151 953 aaKnown RBP eCLIP23.66■■□□□ 1.38
CGREF1-206ENST00000405600 TECPR2O15040 1411 aa23.66■■□□□ 1.38
CGREF1-206ENST00000405600 YTHDC2Q9H6S0 1430 aaKnown RBP23.66■■□□□ 1.38
CGREF1-206ENST00000405600 LRP6O75581 1613 aa23.65■■□□□ 1.38
CGREF1-206ENST00000405600 LAMC1P11047 1609 aa23.65■■□□□ 1.38
CGREF1-206ENST00000405600 NHSL1Q5SYE7 1610 aa23.65■■□□□ 1.38
CGREF1-206ENST00000405600 L3MBTL2Q969R5 705 aa23.65■■□□□ 1.38
CGREF1-206ENST00000405600 SHPRHQ149N8 1683 aa23.65■■□□□ 1.38
CGREF1-206ENST00000405600 POGKQ9P215 609 aa23.6■■□□□ 1.37
CGREF1-206ENST00000405600 XPCQ01831 940 aaPredicted RBP23.59■■□□□ 1.37
CGREF1-206ENST00000405600 SIRT1Q96EB6 747 aa23.59■■□□□ 1.37
CGREF1-206ENST00000405600 PRAM1Q96QH2 718 aa23.59■■□□□ 1.37
CGREF1-206ENST00000405600 KNDC1Q76NI1 1749 aa23.58■■□□□ 1.36
CGREF1-206ENST00000405600 FOXO3O43524 673 aa23.58■■□□□ 1.36
CGREF1-206ENST00000405600 ZNF772Q68DY9 489 aaPredicted RBP23.58■■□□□ 1.36
CGREF1-206ENST00000405600 C8orf37Q96NL8 207 aa23.58■■□□□ 1.36
CGREF1-206ENST00000405600 TRAK1Q9UPV9 953 aa23.58■■□□□ 1.36
CGREF1-206ENST00000405600 CDC42BPGQ6DT37 1551 aa23.57■■□□□ 1.36
CGREF1-206ENST00000405600 ADAMTS2O95450 1211 aa23.57■■□□□ 1.36
CGREF1-206ENST00000405600 PNPLA6Q8IY17 1366 aa23.57■■□□□ 1.36
CGREF1-206ENST00000405600 SOS2Q07890 1332 aaPredicted RBP23.55■■□□□ 1.36
CGREF1-206ENST00000405600 NPHP3Q7Z494 1330 aa23.54■■□□□ 1.36
CGREF1-206ENST00000405600 AFF2P51816 1311 aa23.53■■□□□ 1.36
CGREF1-206ENST00000405600 ADGRB1O14514 1584 aa23.53■■□□□ 1.36
CGREF1-206ENST00000405600 HIRIP3Q9BW71 556 aaPredicted RBP23.52■■□□□ 1.36
CGREF1-206ENST00000405600 DLC1Q96QB1 1528 aa23.52■■□□□ 1.36
CGREF1-206ENST00000405600 NGLY1Q96IV0 654 aa23.51■■□□□ 1.35
CGREF1-206ENST00000405600 PLEKHG5O94827 1062 aa23.49■■□□□ 1.35
CGREF1-206ENST00000405600 MINK1Q8N4C8 1332 aaPredicted RBP23.48■■□□□ 1.35
CGREF1-206ENST00000405600 FMN2Q9NZ56 1722 aa23.48■■□□□ 1.35
CGREF1-206ENST00000405600 RXRBP28702 533 aa23.47■■□□□ 1.35
CGREF1-206ENST00000405600 PHF8Q9UPP1 1060 aa23.46■■□□□ 1.35
CGREF1-206ENST00000405600 RGPD8O14715 1765 aaPredicted RBP23.46■■□□□ 1.35
CGREF1-206ENST00000405600 KRT28Q7Z3Y7 464 aa23.45■■□□□ 1.34
CGREF1-206ENST00000405600 QTRT2Q9H974 415 aaKnown RBP23.45■■□□□ 1.34
CGREF1-206ENST00000405600 LMOD2Q6P5Q4 547 aa23.44■■□□□ 1.34
CGREF1-206ENST00000405600 PMFBP1Q8TBY8 1022 aa23.44■■□□□ 1.34
CGREF1-206ENST00000405600 PXDNQ92626 1479 aa23.43■■□□□ 1.34
CGREF1-206ENST00000405600 DIEXFQ68CQ4 756 aaKnown RBP23.43■■□□□ 1.34
CGREF1-206ENST00000405600 KIAA1210Q9ULL0 1709 aa23.41■■□□□ 1.34
CGREF1-206ENST00000405600 EIF4G2P78344 907 aaKnown RBP eCLIP23.41■■□□□ 1.34
CGREF1-206ENST00000405600 PSME1Q06323 249 aa23.41■■□□□ 1.34
CGREF1-206ENST00000405600 NBPF8Q3BBV2 869 aa23.41■■□□□ 1.34
CGREF1-206ENST00000405600 RALGAPBQ86X10 1494 aa23.4■■□□□ 1.34
CGREF1-206ENST00000405600 HAP1P54257 671 aaPredicted RBP23.39■■□□□ 1.34
CGREF1-206ENST00000405600 USP21Q9UK80 565 aa23.39■■□□□ 1.34
CGREF1-206ENST00000405600 KIF1AQ12756 1690 aa23.39■■□□□ 1.33
CGREF1-206ENST00000405600 EIF3AQ14152 1382 aaKnown RBP23.39■■□□□ 1.33
CGREF1-206ENST00000405600 WASLO00401 505 aaPredicted RBP23.36■■□□□ 1.33
CGREF1-206ENST00000405600 NBPF1Q3BBV0 1214 aa23.36■■□□□ 1.33
CGREF1-206ENST00000405600 SPATA31A3Q5VYP0 1347 aa23.36■■□□□ 1.33
CGREF1-206ENST00000405600 TRPM1Q7Z4N2 1603 aa23.35■■□□□ 1.33
CGREF1-206ENST00000405600 ROCK2O75116 1388 aaKnown RBP23.35■■□□□ 1.33
CGREF1-206ENST00000405600 ADGRB2O60241 1585 aa23.35■■□□□ 1.33
CGREF1-206ENST00000405600 COL22A1Q8NFW1 1626 aaPredicted RBP23.34■■□□□ 1.33
CGREF1-206ENST00000405600 RBM6P78332 1123 aaKnown RBP23.34■■□□□ 1.33
CGREF1-206ENST00000405600 CABLES1Q8TDN4 633 aa23.33■■□□□ 1.33
CGREF1-206ENST00000405600 ANKARQ7Z5J8 1434 aa23.33■■□□□ 1.33
CGREF1-206ENST00000405600 NGDNQ8NEJ9 315 aaKnown RBP23.32■■□□□ 1.32
CGREF1-206ENST00000405600 USP32Q8NFA0 1604 aa23.31■■□□□ 1.32
CGREF1-206ENST00000405600 ARHGEF28Q8N1W1 1705 aaKnown RBP23.31■■□□□ 1.32
CGREF1-206ENST00000405600 PRR36Q9H6K5 1346 aa23.31■■□□□ 1.32
CGREF1-206ENST00000405600 TRPC5Q9UL62 973 aaPredicted RBP23.31■■□□□ 1.32
CGREF1-206ENST00000405600 PAK3O75914 559 aaPredicted RBP23.3■■□□□ 1.32
CGREF1-206ENST00000405600 HSPA5P11021 654 aaKnown RBP23.3■■□□□ 1.32
CGREF1-206ENST00000405600 TNS3Q68CZ2 1445 aa23.29■■□□□ 1.32
CGREF1-206ENST00000405600 CENPJQ9HC77 1338 aaPredicted RBP23.29■■□□□ 1.32
CGREF1-206ENST00000405600 FNBP4Q8N3X1 1017 aaPredicted RBP23.29■■□□□ 1.32
CGREF1-206ENST00000405600 CDK19Q9BWU1 502 aa23.29■■□□□ 1.32
CGREF1-206ENST00000405600 GPRASP1Q5JY77 1395 aa23.28■■□□□ 1.32
CGREF1-206ENST00000405600 NUDT16Q96DE0 195 aaKnown RBP23.28■■□□□ 1.32
CGREF1-206ENST00000405600 CARD11Q9BXL7 1154 aa23.27■■□□□ 1.32
CGREF1-206ENST00000405600 TULP4Q9NRJ4 1543 aa23.27■■□□□ 1.32
CGREF1-206ENST00000405600 MARF1Q9Y4F3 1742 aaKnown RBP23.26■■□□□ 1.31
CGREF1-206ENST00000405600 SBNO1A3KN83 1393 aa23.25■■□□□ 1.31
CGREF1-206ENST00000405600 UPF1Q92900 1129 aaKnown RBP eCLIP23.24■■□□□ 1.31
CGREF1-206ENST00000405600 RGS12O14924 1447 aa23.24■■□□□ 1.31
CGREF1-206ENST00000405600 USP47Q96K76 1375 aa23.24■■□□□ 1.31
CGREF1-206ENST00000405600 CDK12Q9NYV4 1490 aaPredicted RBP23.23■■□□□ 1.31
CGREF1-206ENST00000405600 ARHGEF10O15013 1369 aa23.23■■□□□ 1.31
CGREF1-206ENST00000405600 SRPK2P78362 688 aaKnown RBP23.22■■□□□ 1.31
CGREF1-206ENST00000405600 BCL9LQ86UU0 1499 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms