RNA–Protein interactions for RNA: ENST00000405271.5

EPCAM-202, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5 BASIC

Gene EPCAM, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-202ENST00000405271 PTCH1Q13635 1447 aa30.79■■■□□ 2.52
EPCAM-202ENST00000405271 FAM135BQ49AJ0 1406 aa30.79■■■□□ 2.52
EPCAM-202ENST00000405271 CENPJQ9HC77 1338 aaPredicted RBP30.79■■■□□ 2.52
EPCAM-202ENST00000405271 STK26Q9P289 416 aa30.78■■■□□ 2.52
EPCAM-202ENST00000405271 HSPA1LP34931 641 aa30.76■■■□□ 2.51
EPCAM-202ENST00000405271 SIRT1Q96EB6 747 aa30.74■■■□□ 2.51
EPCAM-202ENST00000405271 TESK2Q96S53 571 aa30.74■■■□□ 2.51
EPCAM-202ENST00000405271 SLC24A1O60721 1099 aa30.73■■■□□ 2.51
EPCAM-202ENST00000405271 ADGRB2O60241 1585 aa30.72■■■□□ 2.51
EPCAM-202ENST00000405271 MSH6P52701 1360 aa30.72■■■□□ 2.51
EPCAM-202ENST00000405271 NCOA3Q9Y6Q9 1424 aa30.71■■■□□ 2.51
EPCAM-202ENST00000405271 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.69■■■□□ 2.5
EPCAM-202ENST00000405271 ROBO2Q9HCK4 1378 aa30.68■■■□□ 2.5
EPCAM-202ENST00000405271 C14orf37Q86TY3 774 aa30.68■■■□□ 2.5
EPCAM-202ENST00000405271 PRAM1Q96QH2 718 aa30.68■■■□□ 2.5
EPCAM-202ENST00000405271 TULP4Q9NRJ4 1543 aa30.67■■■□□ 2.5
EPCAM-202ENST00000405271 TMF1P82094 1093 aa30.67■■■□□ 2.5
EPCAM-202ENST00000405271 C19orf44Q9H6X5 657 aa30.67■■■□□ 2.5
EPCAM-202ENST00000405271 POGKQ9P215 609 aa30.67■■■□□ 2.5
EPCAM-202ENST00000405271 NALCNQ8IZF0 1738 aa30.66■■■□□ 2.5
EPCAM-202ENST00000405271 CCDC7Q96M83 1385 aa30.66■■■□□ 2.5
EPCAM-202ENST00000405271 MYOM1P52179 1685 aa30.66■■■□□ 2.5
EPCAM-202ENST00000405271 SLAIN2Q9P270 581 aa30.65■■■□□ 2.5
EPCAM-202ENST00000405271 DISP3Q9P2K9 1392 aa30.65■■■□□ 2.5
EPCAM-202ENST00000405271 PLEKHH1Q9ULM0 1364 aa30.64■■■□□ 2.5
EPCAM-202ENST00000405271 KIF7Q2M1P5 1343 aa30.62■■■□□ 2.49
EPCAM-202ENST00000405271 WASHC2AQ641Q2 1341 aa30.62■■■□□ 2.49
EPCAM-202ENST00000405271 C11orf95C9JLR9 678 aaPredicted RBP30.6■■■□□ 2.49
EPCAM-202ENST00000405271 CDCA8Q53HL2 280 aa30.59■■■□□ 2.49
EPCAM-202ENST00000405271 WAPLQ7Z5K2 1190 aa30.58■■■□□ 2.49
EPCAM-202ENST00000405271 CADPS2Q86UW7 1296 aa30.58■■■□□ 2.49
EPCAM-202ENST00000405271 ATF3P18847 181 aa30.57■■■□□ 2.49
EPCAM-202ENST00000405271 SAFB2Q14151 953 aaKnown RBP eCLIP30.57■■■□□ 2.49
EPCAM-202ENST00000405271 EVC2Q86UK5 1308 aa30.56■■■□□ 2.48
EPCAM-202ENST00000405271 ITSN1Q15811 1721 aa30.55■■■□□ 2.48
EPCAM-202ENST00000405271 FMN2Q9NZ56 1722 aa30.55■■■□□ 2.48
EPCAM-202ENST00000405271 CDC42BPGQ6DT37 1551 aa30.54■■■□□ 2.48
EPCAM-202ENST00000405271 MINK1Q8N4C8 1332 aaPredicted RBP30.54■■■□□ 2.48
EPCAM-202ENST00000405271 TOPAZ1Q8N9V7 1692 aa30.51■■■□□ 2.47
EPCAM-202ENST00000405271 PUS7Q96PZ0 661 aaKnown RBP30.51■■■□□ 2.47
EPCAM-202ENST00000405271 RGPD8O14715 1765 aaPredicted RBP30.49■■■□□ 2.47
EPCAM-202ENST00000405271 ADGRL3Q9HAR2 1447 aa30.48■■■□□ 2.47
EPCAM-202ENST00000405271 DCCP43146 1447 aa30.48■■■□□ 2.47
EPCAM-202ENST00000405271 ROBO1Q9Y6N7 1651 aa30.47■■■□□ 2.47
EPCAM-202ENST00000405271 POLR3GLQ9BT43 218 aa30.46■■■□□ 2.47
EPCAM-202ENST00000405271 USP32Q8NFA0 1604 aa30.45■■■□□ 2.47
EPCAM-202ENST00000405271 ATAD2Q6PL18 1390 aa30.44■■■□□ 2.46
EPCAM-202ENST00000405271 WASLO00401 505 aaPredicted RBP30.42■■■□□ 2.46
EPCAM-202ENST00000405271 NINLQ9Y2I6 1382 aa30.41■■■□□ 2.46
EPCAM-202ENST00000405271 AKAP12Q02952 1782 aa30.4■■■□□ 2.46
EPCAM-202ENST00000405271 SRPK2P78362 688 aaKnown RBP30.4■■■□□ 2.46
EPCAM-202ENST00000405271 DDX10Q13206 875 aaKnown RBP30.4■■■□□ 2.46
EPCAM-202ENST00000405271 CDK19Q9BWU1 502 aa30.4■■■□□ 2.46
EPCAM-202ENST00000405271 ATP7BP35670 1465 aa30.4■■■□□ 2.46
EPCAM-202ENST00000405271 BRINP3Q76B58 766 aa30.39■■■□□ 2.46
EPCAM-202ENST00000405271 MST1RQ04912 1400 aa30.38■■■□□ 2.45
EPCAM-202ENST00000405271 CABP2Q9NPB3 220 aa30.37■■■□□ 2.45
EPCAM-202ENST00000405271 ANKARQ7Z5J8 1434 aa30.36■■■□□ 2.45
EPCAM-202ENST00000405271 MON2Q7Z3U7 1717 aa30.34■■■□□ 2.45
EPCAM-202ENST00000405271 DIEXFQ68CQ4 756 aaKnown RBP30.33■■■□□ 2.45
EPCAM-202ENST00000405271 MED1Q15648 1581 aaPredicted RBP30.28■■■□□ 2.44
EPCAM-202ENST00000405271 C1orf167Q5SNV9 1468 aa30.27■■■□□ 2.44
EPCAM-202ENST00000405271 PPIP5K1Q6PFW1 1433 aa30.27■■■□□ 2.44
EPCAM-202ENST00000405271 KIF1AQ12756 1690 aa30.27■■■□□ 2.44
EPCAM-202ENST00000405271 NUDT16Q96DE0 195 aaKnown RBP30.27■■■□□ 2.44
EPCAM-202ENST00000405271 ANKRD36BQ8N2N9 1353 aa30.26■■■□□ 2.43
EPCAM-202ENST00000405271 PRR36Q9H6K5 1346 aa30.26■■■□□ 2.43
EPCAM-202ENST00000405271 KIF20BQ96Q89 1820 aa30.25■■■□□ 2.43
EPCAM-202ENST00000405271 PHLPP1O60346 1717 aa30.25■■■□□ 2.43
EPCAM-202ENST00000405271 TMC1Q8TDI8 760 aa30.25■■■□□ 2.43
EPCAM-202ENST00000405271 ILDR2Q71H61 639 aa30.24■■■□□ 2.43
EPCAM-202ENST00000405271 ORAI2Q96SN7 254 aa30.24■■■□□ 2.43
EPCAM-202ENST00000405271 CD163L1Q9NR16 1453 aa30.24■■■□□ 2.43
EPCAM-202ENST00000405271 AHDC1Q5TGY3 1603 aaPredicted RBP30.23■■■□□ 2.43
EPCAM-202ENST00000405271 CCDC61Q9Y6R9 512 aa30.23■■■□□ 2.43
EPCAM-202ENST00000405271 JCADQ9P266 1359 aa30.23■■■□□ 2.43
EPCAM-202ENST00000405271 ANKRD26Q9UPS8 1709 aa30.22■■■□□ 2.43
EPCAM-202ENST00000405271 DDX17Q92841 729 aaKnown RBP30.22■■■□□ 2.43
EPCAM-202ENST00000405271 NRKQ7Z2Y5 1582 aa30.22■■■□□ 2.43
EPCAM-202ENST00000405271 SLC12A5Q9H2X9 1139 aa30.22■■■□□ 2.43
EPCAM-202ENST00000405271 PANK3Q9H999 370 aa30.22■■■□□ 2.43
EPCAM-202ENST00000405271 COL16A1Q07092 1604 aaPredicted RBP30.21■■■□□ 2.43
EPCAM-202ENST00000405271 A0A1W2PP64 1363 aa30.18■■■□□ 2.42
EPCAM-202ENST00000405271 PHF23Q9BUL5 403 aaPredicted RBP30.17■■■□□ 2.42
EPCAM-202ENST00000405271 TERF2IPQ9NYB0 399 aa30.17■■■□□ 2.42
EPCAM-202ENST00000405271 NUTM2FA1L443 756 aa30.17■■■□□ 2.42
EPCAM-202ENST00000405271 CABP1Q9NZU7 370 aa30.17■■■□□ 2.42
EPCAM-202ENST00000405271 CPSF1Q10570 1443 aaKnown RBP30.16■■■□□ 2.42
EPCAM-202ENST00000405271 ESCO1Q5FWF5 840 aa30.16■■■□□ 2.42
EPCAM-202ENST00000405271 HDGFL2Q7Z4V5 671 aaPredicted RBP30.14■■■□□ 2.42
EPCAM-202ENST00000405271 LRRC59Q96AG4 307 aaKnown RBP30.14■■■□□ 2.42
EPCAM-202ENST00000405271 PLEKHG3A1L390 1219 aa30.13■■■□□ 2.41
EPCAM-202ENST00000405271 NSD3Q9BZ95 1437 aa30.13■■■□□ 2.41
EPCAM-202ENST00000405271 PER1O15534 1290 aaPredicted RBP30.12■■■□□ 2.41
EPCAM-202ENST00000405271 POLR3AO14802 1390 aaPredicted RBP30.12■■■□□ 2.41
EPCAM-202ENST00000405271 SPATA31A6Q5VVP1 1343 aa30.11■■■□□ 2.41
EPCAM-202ENST00000405271 NHSL1Q5SYE7 1610 aa30.1■■■□□ 2.41
EPCAM-202ENST00000405271 KNSTRNQ9Y448 316 aa30.09■■■□□ 2.41
EPCAM-202ENST00000405271 SOS2Q07890 1332 aaPredicted RBP30.09■■■□□ 2.41
EPCAM-202ENST00000405271 NPC1L1Q9UHC9 1359 aa30.09■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms