RNA–Protein interactions for RNA: ENST00000400053.8

PTPRM-202, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRM, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-202ENST00000400053 BCL11BQ9C0K0 894 aaPredicted RBP10.81□□□□□ -0.68
PTPRM-202ENST00000400053 RNF214Q8ND24 703 aa10.81□□□□□ -0.68
PTPRM-202ENST00000400053 PANK1Q8TE04 598 aa10.81□□□□□ -0.68
PTPRM-202ENST00000400053 NASPP49321 788 aaPredicted RBP10.81□□□□□ -0.68
PTPRM-202ENST00000400053 ANKRD20A12PQ8NF67 263 aa10.81□□□□□ -0.68
PTPRM-202ENST00000400053 DZIP1LQ8IYY4 767 aaKnown RBP10.81□□□□□ -0.68
PTPRM-202ENST00000400053 AKAP17AQ02040 695 aaKnown RBP10.8□□□□□ -0.68
PTPRM-202ENST00000400053 KRI1Q8N9T8 703 aaKnown RBP10.8□□□□□ -0.68
PTPRM-202ENST00000400053 H3BQV1 296 aa10.8□□□□□ -0.68
PTPRM-202ENST00000400053 IFFO2Q5TF58 517 aa10.8□□□□□ -0.68
PTPRM-202ENST00000400053 ABCC5O15440 1437 aa10.8□□□□□ -0.68
PTPRM-202ENST00000400053 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.8□□□□□ -0.68
PTPRM-202ENST00000400053 PPP2R1AP30153 589 aa10.8□□□□□ -0.68
PTPRM-202ENST00000400053 DDX19BQ9UMR2 479 aa10.79□□□□□ -0.68
PTPRM-202ENST00000400053 SMG6Q86US8 1419 aaKnown RBP10.79□□□□□ -0.68
PTPRM-202ENST00000400053 MSH5O43196 834 aa10.79□□□□□ -0.68
PTPRM-202ENST00000400053 REC8O95072 547 aa10.79□□□□□ -0.68
PTPRM-202ENST00000400053 RBM10P98175 930 aaKnown RBP10.79□□□□□ -0.68
PTPRM-202ENST00000400053 TOMM22Q9NS69 142 aa10.79□□□□□ -0.68
PTPRM-202ENST00000400053 MINK1Q8N4C8 1332 aaPredicted RBP10.79□□□□□ -0.68
PTPRM-202ENST00000400053 CFAP70Q5T0N1 1121 aa10.79□□□□□ -0.68
PTPRM-202ENST00000400053 OSCARQ8IYS5 282 aa10.79□□□□□ -0.68
PTPRM-202ENST00000400053 VPS53Q5VIR6 699 aa10.78□□□□□ -0.68
PTPRM-202ENST00000400053 PES1O00541 588 aaKnown RBP10.78□□□□□ -0.68
PTPRM-202ENST00000400053 AAMPQ13685 434 aa10.78□□□□□ -0.68
PTPRM-202ENST00000400053 SYNE3Q6ZMZ3 975 aa10.78□□□□□ -0.68
PTPRM-202ENST00000400053 C11orf95C9JLR9 678 aaPredicted RBP10.78□□□□□ -0.68
PTPRM-202ENST00000400053 GTF2E1P29083 439 aaPredicted RBP10.78□□□□□ -0.68
PTPRM-202ENST00000400053 NUCB2P80303 420 aa10.78□□□□□ -0.68
PTPRM-202ENST00000400053 TEX35Q5T0J7 233 aa10.78□□□□□ -0.68
PTPRM-202ENST00000400053 FAM184AQ8NB25 1140 aa10.78□□□□□ -0.68
PTPRM-202ENST00000400053 DIAPH1O60610 1272 aaKnown RBP10.78□□□□□ -0.68
PTPRM-202ENST00000400053 BACH2Q9BYV9 841 aa10.78□□□□□ -0.68
PTPRM-202ENST00000400053 EID1Q9Y6B2 187 aa10.77□□□□□ -0.68
PTPRM-202ENST00000400053 AKNAQ7Z591 1439 aa10.77□□□□□ -0.69
PTPRM-202ENST00000400053 URB2Q14146 1524 aaKnown RBP10.77□□□□□ -0.69
PTPRM-202ENST00000400053 ANO2Q9NQ90 1003 aa10.77□□□□□ -0.69
PTPRM-202ENST00000400053 COG3Q96JB2 828 aa10.77□□□□□ -0.69
PTPRM-202ENST00000400053 CCDC9Q9Y3X0 531 aaKnown RBP10.77□□□□□ -0.69
PTPRM-202ENST00000400053 HOOK1Q9UJC3 728 aaKnown RBP10.76□□□□□ -0.69
PTPRM-202ENST00000400053 HOMER1Q86YM7 354 aa10.76□□□□□ -0.69
PTPRM-202ENST00000400053 AMOTL1Q8IY63 956 aa10.76□□□□□ -0.69
PTPRM-202ENST00000400053 ACBD3Q9H3P7 528 aa10.76□□□□□ -0.69
PTPRM-202ENST00000400053 IFT57Q9NWB7 429 aa10.76□□□□□ -0.69
PTPRM-202ENST00000400053 NGDNQ8NEJ9 315 aaKnown RBP10.76□□□□□ -0.69
PTPRM-202ENST00000400053 VPS37CA5D8V6 355 aaPredicted RBP10.76□□□□□ -0.69
PTPRM-202ENST00000400053 CAVIN1Q6NZI2 390 aaKnown RBP10.76□□□□□ -0.69
PTPRM-202ENST00000400053 TCEAL9Q9UHQ7 104 aa10.76□□□□□ -0.69
PTPRM-202ENST00000400053 MAPKBP1O60336 1514 aa10.75□□□□□ -0.69
PTPRM-202ENST00000400053 RIPK4P57078 832 aa10.75□□□□□ -0.69
PTPRM-202ENST00000400053 NCOA1Q15788 1441 aa10.75□□□□□ -0.69
PTPRM-202ENST00000400053 CAMSAP2Q08AD1 1489 aa10.75□□□□□ -0.69
PTPRM-202ENST00000400053 BICD2Q8TD16 824 aa10.75□□□□□ -0.69
PTPRM-202ENST00000400053 NUTM2FA1L443 756 aa10.75□□□□□ -0.69
PTPRM-202ENST00000400053 LTV1Q96GA3 475 aaPredicted RBP10.75□□□□□ -0.69
PTPRM-202ENST00000400053 MAP7D2Q96T17 732 aa10.75□□□□□ -0.69
PTPRM-202ENST00000400053 RPRD2Q5VT52 1461 aaKnown RBP10.75□□□□□ -0.69
PTPRM-202ENST00000400053 AMPHP49418 695 aa10.74□□□□□ -0.69
PTPRM-202ENST00000400053 DIAPH3Q9NSV4 1193 aa10.74□□□□□ -0.69
PTPRM-202ENST00000400053 ERBINQ96RT1 1412 aa10.74□□□□□ -0.69
PTPRM-202ENST00000400053 MAGI1Q96QZ7 1491 aaPredicted RBP10.74□□□□□ -0.69
PTPRM-202ENST00000400053 TMEM132EQ6IEE7 984 aa10.74□□□□□ -0.69
PTPRM-202ENST00000400053 MTHFSP49914 203 aa10.74□□□□□ -0.69
PTPRM-202ENST00000400053 FBXW7Q969H0 707 aa10.74□□□□□ -0.69
PTPRM-202ENST00000400053 NOL10Q9BSC4 688 aaKnown RBP10.74□□□□□ -0.69
PTPRM-202ENST00000400053 TCP11L2Q8N4U5 519 aa10.73□□□□□ -0.69
PTPRM-202ENST00000400053 RUFY2Q8WXA3 655 aa10.73□□□□□ -0.69
PTPRM-202ENST00000400053 TRIM29Q14134 588 aa10.73□□□□□ -0.69
PTPRM-202ENST00000400053 SCAPERQ9BY12 1400 aa10.73□□□□□ -0.69
PTPRM-202ENST00000400053 PLB1Q6P1J6 1458 aa10.73□□□□□ -0.69
PTPRM-202ENST00000400053 MPNDQ8N594 471 aa10.73□□□□□ -0.69
PTPRM-202ENST00000400053 CCDC141Q6ZP82 1450 aa10.73□□□□□ -0.69
PTPRM-202ENST00000400053 GRIN2AQ12879 1464 aa10.72□□□□□ -0.69
PTPRM-202ENST00000400053 CTDP1Q9Y5B0 961 aaPredicted RBP10.72□□□□□ -0.69
PTPRM-202ENST00000400053 DNAJC5BQ9UF47 199 aa10.72□□□□□ -0.69
PTPRM-202ENST00000400053 CCDC39Q9UFE4 941 aa10.72□□□□□ -0.69
PTPRM-202ENST00000400053 ZKSCAN1P17029 563 aaPredicted RBP10.72□□□□□ -0.69
PTPRM-202ENST00000400053 RDXP35241 583 aaKnown RBP10.72□□□□□ -0.69
PTPRM-202ENST00000400053 ARHGEF11O15085 1522 aa10.72□□□□□ -0.69
PTPRM-202ENST00000400053 NOM1Q5C9Z4 860 aaKnown RBP10.72□□□□□ -0.69
PTPRM-202ENST00000400053 AK7Q96M32 723 aa10.72□□□□□ -0.69
PTPRM-202ENST00000400053 SMC3Q9UQE7 1217 aa10.72□□□□□ -0.69
PTPRM-202ENST00000400053 PTPRKQ15262 1439 aa10.72□□□□□ -0.69
PTPRM-202ENST00000400053 INTS3Q68E01 1043 aaKnown RBP10.71□□□□□ -0.69
PTPRM-202ENST00000400053 MTERF4Q7Z6M4 381 aaKnown RBP10.71□□□□□ -0.69
PTPRM-202ENST00000400053 THOC2Q8NI27 1593 aaKnown RBP10.71□□□□□ -0.69
PTPRM-202ENST00000400053 API5Q9BZZ5 524 aaKnown RBP10.71□□□□□ -0.69
PTPRM-202ENST00000400053 GGNBP2Q9H3C7 697 aa10.71□□□□□ -0.69
PTPRM-202ENST00000400053 PDE3AQ14432 1141 aa10.71□□□□□ -0.69
PTPRM-202ENST00000400053 PRPF40AO75400 957 aaKnown RBP10.71□□□□□ -0.7
PTPRM-202ENST00000400053 TRHP20396 242 aaPredicted RBP10.71□□□□□ -0.7
PTPRM-202ENST00000400053 ARGLU1Q9NWB6 273 aaPredicted RBP10.71□□□□□ -0.7
PTPRM-202ENST00000400053 PDZRN3Q9UPQ7 1066 aa10.71□□□□□ -0.7
PTPRM-202ENST00000400053 DCTN1Q14203 1278 aa10.71□□□□□ -0.7
PTPRM-202ENST00000400053 CYB5RLQ6IPT4 315 aa10.71□□□□□ -0.7
PTPRM-202ENST00000400053 RUFY1Q96T51 708 aa10.71□□□□□ -0.7
PTPRM-202ENST00000400053 CABP2Q9NPB3 220 aa10.71□□□□□ -0.7
PTPRM-202ENST00000400053 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.7□□□□□ -0.7
PTPRM-202ENST00000400053 NECTIN2Q92692 538 aa10.7□□□□□ -0.7
PTPRM-202ENST00000400053 SASS6Q6UVJ0 657 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms