RNA–Protein interactions for RNA: ENST00000399367.7

ITSN1-212, Transcript of intersectin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ITSN1, Length 5,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-212ENST00000399367 CFAP70Q5T0N1 1121 aa18.22■□□□□ 0.51
ITSN1-212ENST00000399367 DCAF8L1A6NGE4 600 aa18.22■□□□□ 0.51
ITSN1-212ENST00000399367 HSP90AB4PQ58FF6 505 aa18.21■□□□□ 0.51
ITSN1-212ENST00000399367 DDX11L8A8MPP1 907 aa18.21■□□□□ 0.51
ITSN1-212ENST00000399367 TPM1P09493 284 aa18.2■□□□□ 0.5
ITSN1-212ENST00000399367 CCAR2Q8N163 923 aaKnown RBP18.2■□□□□ 0.5
ITSN1-212ENST00000399367 LNPKQ9C0E8 428 aa18.2■□□□□ 0.5
ITSN1-212ENST00000399367 UBTFL1P0CB47 393 aaPredicted RBP18.2■□□□□ 0.5
ITSN1-212ENST00000399367 CCDC47Q96A33 483 aaKnown RBP18.2■□□□□ 0.5
ITSN1-212ENST00000399367 ERC2O15083 957 aa18.2■□□□□ 0.5
ITSN1-212ENST00000399367 ZBED9Q6R2W3 1325 aa18.19■□□□□ 0.5
ITSN1-212ENST00000399367 MTHFSP49914 203 aa18.19■□□□□ 0.5
ITSN1-212ENST00000399367 PRDM2Q13029 1718 aa18.19■□□□□ 0.5
ITSN1-212ENST00000399367 RALYLQ86SE5 291 aaKnown RBP18.19■□□□□ 0.5
ITSN1-212ENST00000399367 ANKRD50Q9ULJ7 1429 aa18.18■□□□□ 0.5
ITSN1-212ENST00000399367 VPS37CA5D8V6 355 aaPredicted RBP18.18■□□□□ 0.5
ITSN1-212ENST00000399367 BICD2Q8TD16 824 aa18.18■□□□□ 0.5
ITSN1-212ENST00000399367 PRAM1Q96QH2 718 aa18.17■□□□□ 0.5
ITSN1-212ENST00000399367 STAC3Q96MF2 364 aa18.17■□□□□ 0.5
ITSN1-212ENST00000399367 IKQ13123 557 aaPredicted RBP18.17■□□□□ 0.5
ITSN1-212ENST00000399367 ARHGAP5Q13017 1502 aa18.16■□□□□ 0.5
ITSN1-212ENST00000399367 SF3B2Q13435 895 aaKnown RBP18.16■□□□□ 0.5
ITSN1-212ENST00000399367 PLEKHO1Q53GL0 409 aaPredicted RBP18.16■□□□□ 0.5
ITSN1-212ENST00000399367 DDX54Q8TDD1 881 aaKnown RBP18.16■□□□□ 0.5
ITSN1-212ENST00000399367 KDM4AO75164 1064 aa18.15■□□□□ 0.5
ITSN1-212ENST00000399367 THEMISQ8N1K5 641 aaPredicted RBP18.15■□□□□ 0.5
ITSN1-212ENST00000399367 ZNF428Q96B54 188 aa18.15■□□□□ 0.5
ITSN1-212ENST00000399367 PIP4K2BP78356 416 aa18.14■□□□□ 0.5
ITSN1-212ENST00000399367 KIF6Q6ZMV9 814 aa18.14■□□□□ 0.5
ITSN1-212ENST00000399367 FGD6Q6ZV73 1430 aa18.14■□□□□ 0.49
ITSN1-212ENST00000399367 PANK1Q8TE04 598 aa18.14■□□□□ 0.49
ITSN1-212ENST00000399367 KIF7Q2M1P5 1343 aa18.14■□□□□ 0.49
ITSN1-212ENST00000399367 SAFBQ15424 915 aaKnown RBP eCLIP18.14■□□□□ 0.49
ITSN1-212ENST00000399367 KRI1Q8N9T8 703 aaKnown RBP18.14■□□□□ 0.49
ITSN1-212ENST00000399367 GSE1Q14687 1217 aa18.14■□□□□ 0.49
ITSN1-212ENST00000399367 INTS3Q68E01 1043 aaKnown RBP18.14■□□□□ 0.49
ITSN1-212ENST00000399367 TOM1L2Q6ZVM7 507 aa18.14■□□□□ 0.49
ITSN1-212ENST00000399367 GAS2L2Q8NHY3 880 aa18.13■□□□□ 0.49
ITSN1-212ENST00000399367 SMC3Q9UQE7 1217 aa18.13■□□□□ 0.49
ITSN1-212ENST00000399367 ANKRD20A12PQ8NF67 263 aa18.13■□□□□ 0.49
ITSN1-212ENST00000399367 TATP17735 454 aaPredicted RBP18.12■□□□□ 0.49
ITSN1-212ENST00000399367 IPO7O95373 1038 aaKnown RBP18.12■□□□□ 0.49
ITSN1-212ENST00000399367 PRKAR2BP31323 418 aa18.12■□□□□ 0.49
ITSN1-212ENST00000399367 HSP90AA2PQ14568 343 aaPredicted RBP18.12■□□□□ 0.49
ITSN1-212ENST00000399367 CCDC30Q5VVM6 783 aa18.12■□□□□ 0.49
ITSN1-212ENST00000399367 SURF6O75683 361 aaKnown RBP18.11■□□□□ 0.49
ITSN1-212ENST00000399367 WASHC2AQ641Q2 1341 aa18.11■□□□□ 0.49
ITSN1-212ENST00000399367 SLC26A8Q96RN1 970 aa18.11■□□□□ 0.49
ITSN1-212ENST00000399367 DNAJC2Q99543 621 aaKnown RBP18.11■□□□□ 0.49
ITSN1-212ENST00000399367 FSD1Q9BTV5 496 aa18.11■□□□□ 0.49
ITSN1-212ENST00000399367 HOOK1Q9UJC3 728 aaKnown RBP18.1■□□□□ 0.49
ITSN1-212ENST00000399367 PRG4Q92954 1404 aaPredicted RBP18.1■□□□□ 0.49
ITSN1-212ENST00000399367 ADAMTS8Q9UP79 889 aa18.1■□□□□ 0.49
ITSN1-212ENST00000399367 TCP11L2Q8N4U5 519 aa18.1■□□□□ 0.49
ITSN1-212ENST00000399367 TBC1D2BQ9UPU7 963 aa18.1■□□□□ 0.49
ITSN1-212ENST00000399367 FBXO3Q9UK99 471 aa18.1■□□□□ 0.49
ITSN1-212ENST00000399367 TNNT3P45378 269 aaPredicted RBP18.09■□□□□ 0.49
ITSN1-212ENST00000399367 CLASRPQ8N2M8 674 aaKnown RBP18.09■□□□□ 0.49
ITSN1-212ENST00000399367 SKOR2Q2VWA4 1001 aaPredicted RBP18.08■□□□□ 0.49
ITSN1-212ENST00000399367 RSPH6AQ9H0K4 717 aa18.08■□□□□ 0.49
ITSN1-212ENST00000399367 ZNF592Q92610 1267 aa18.08■□□□□ 0.48
ITSN1-212ENST00000399367 RAPGEF3O95398 923 aa18.08■□□□□ 0.48
ITSN1-212ENST00000399367 CABP4P57796 275 aa18.08■□□□□ 0.48
ITSN1-212ENST00000399367 CCDC7Q96M83 1385 aa18.08■□□□□ 0.48
ITSN1-212ENST00000399367 CNNM1Q9NRU3 951 aa18.07■□□□□ 0.48
ITSN1-212ENST00000399367 FANCIQ9NVI1 1328 aa18.07■□□□□ 0.48
ITSN1-212ENST00000399367 CCAR1Q8IX12 1150 aaKnown RBP18.07■□□□□ 0.48
ITSN1-212ENST00000399367 CABP1Q9NZU7 370 aa18.07■□□□□ 0.48
ITSN1-212ENST00000399367 CDK19Q9BWU1 502 aa18.07■□□□□ 0.48
ITSN1-212ENST00000399367 R3HCC1Q9Y3T6 440 aaKnown RBP18.07■□□□□ 0.48
ITSN1-212ENST00000399367 SMG6Q86US8 1419 aaKnown RBP18.06■□□□□ 0.48
ITSN1-212ENST00000399367 XPCQ01831 940 aaPredicted RBP18.06■□□□□ 0.48
ITSN1-212ENST00000399367 SULT6B1Q6IMI4 303 aa18.06■□□□□ 0.48
ITSN1-212ENST00000399367 SLC12A5Q9H2X9 1139 aa18.06■□□□□ 0.48
ITSN1-212ENST00000399367 GNAI3P08754 354 aa18.05■□□□□ 0.48
ITSN1-212ENST00000399367 ANKLE2Q86XL3 938 aa18.05■□□□□ 0.48
ITSN1-212ENST00000399367 PRDM11Q9NQV5 511 aa18.05■□□□□ 0.48
ITSN1-212ENST00000399367 RRP12Q5JTH9 1297 aaKnown RBP18.05■□□□□ 0.48
ITSN1-212ENST00000399367 SCAPERQ9BY12 1400 aa18.05■□□□□ 0.48
ITSN1-212ENST00000399367 CNTROBQ8N137 903 aa18.05■□□□□ 0.48
ITSN1-212ENST00000399367 BRMS1Q9HCU9 246 aa18.05■□□□□ 0.48
ITSN1-212ENST00000399367 NBPF1Q3BBV0 1214 aa18.04■□□□□ 0.48
ITSN1-212ENST00000399367 RRBP1Q9P2E9 1410 aaKnown RBP18.04■□□□□ 0.48
ITSN1-212ENST00000399367 ATP2B1P20020 1258 aa18.04■□□□□ 0.48
ITSN1-212ENST00000399367 CCDC70Q6NSX1 233 aa18.04■□□□□ 0.48
ITSN1-212ENST00000399367 CUX1P39880 1505 aa18.04■□□□□ 0.48
ITSN1-212ENST00000399367 SYNJ2O15056 1496 aa18.04■□□□□ 0.48
ITSN1-212ENST00000399367 CCDC73Q6ZRK6 1079 aa18.04■□□□□ 0.48
ITSN1-212ENST00000399367 TWISTNBQ3B726 338 aaPredicted RBP18.03■□□□□ 0.48
ITSN1-212ENST00000399367 ZNF530Q6P9A1 599 aaPredicted RBP18.03■□□□□ 0.48
ITSN1-212ENST00000399367 FYCO1Q9BQS8 1478 aa18.03■□□□□ 0.48
ITSN1-212ENST00000399367 EXOSC9Q06265 439 aaKnown RBP18.03■□□□□ 0.48
ITSN1-212ENST00000399367 HDGFL1Q5TGJ6 251 aa18.03■□□□□ 0.48
ITSN1-212ENST00000399367 GRIN2BQ13224 1484 aa18.03■□□□□ 0.48
ITSN1-212ENST00000399367 XBP1P17861 261 aa18.03■□□□□ 0.48
ITSN1-212ENST00000399367 SART3Q15020 963 aaKnown RBP18.03■□□□□ 0.48
ITSN1-212ENST00000399367 ATP2B2Q01814 1243 aa18.03■□□□□ 0.48
ITSN1-212ENST00000399367 NCOA2Q15596 1464 aa18.02■□□□□ 0.48
ITSN1-212ENST00000399367 MYL6BP14649 208 aa18.02■□□□□ 0.48
ITSN1-212ENST00000399367 SASS6Q6UVJ0 657 aa18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms