RNA–Protein interactions for RNA: ENST00000399355.6

ITSN1-211, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-211ENST00000399355 CDCA8Q53HL2 280 aa15.28■□□□□ 0.04
ITSN1-211ENST00000399355 PCDHB15Q9Y5E8 787 aa15.28■□□□□ 0.04
ITSN1-211ENST00000399355 STAG3Q9UJ98 1225 aa15.27■□□□□ 0.04
ITSN1-211ENST00000399355 INO80Q9ULG1 1556 aaPredicted RBP15.27■□□□□ 0.04
ITSN1-211ENST00000399355 C8orf34Q49A92 452 aa15.27■□□□□ 0.04
ITSN1-211ENST00000399355 C14orf93Q9H972 538 aaKnown RBP15.27■□□□□ 0.04
ITSN1-211ENST00000399355 UHRF1BP1LA0JNW5 1464 aa15.26■□□□□ 0.03
ITSN1-211ENST00000399355 EIF3AQ14152 1382 aaKnown RBP15.26■□□□□ 0.03
ITSN1-211ENST00000399355 TET3O43151 1660 aa15.25■□□□□ 0.03
ITSN1-211ENST00000399355 MAP3K4Q9Y6R4 1608 aa15.25■□□□□ 0.03
ITSN1-211ENST00000399355 CABP1Q9NZU7 370 aa15.25■□□□□ 0.03
ITSN1-211ENST00000399355 POGKQ9P215 609 aa15.25■□□□□ 0.03
ITSN1-211ENST00000399355 ZNF518AQ6AHZ1 1483 aa15.25■□□□□ 0.03
ITSN1-211ENST00000399355 ABCA9Q8IUA7 1624 aa15.25■□□□□ 0.03
ITSN1-211ENST00000399355 IL27Q8NEV9 243 aa15.25■□□□□ 0.03
ITSN1-211ENST00000399355 RTEL1-TNFRSF6BF6WH68 1400 aa15.25■□□□□ 0.03
ITSN1-211ENST00000399355 FRMPD1Q5SYB0 1578 aa15.24■□□□□ 0.03
ITSN1-211ENST00000399355 FAM69CQ0P6D2 419 aa15.24■□□□□ 0.03
ITSN1-211ENST00000399355 SIGLEC1Q9BZZ2 1709 aa15.24■□□□□ 0.03
ITSN1-211ENST00000399355 EFCAB6Q5THR3 1501 aa15.23■□□□□ 0.03
ITSN1-211ENST00000399355 KDM5AP29375 1690 aaKnown RBP15.23■□□□□ 0.03
ITSN1-211ENST00000399355 KIF1BO60333 1816 aa15.22■□□□□ 0.03
ITSN1-211ENST00000399355 SLKQ9H2G2 1235 aaPredicted RBP15.22■□□□□ 0.03
ITSN1-211ENST00000399355 SYNMO15061 1565 aa15.22■□□□□ 0.03
ITSN1-211ENST00000399355 GOLGB1Q14789 3259 aaKnown RBP15.22■□□□□ 0.03
ITSN1-211ENST00000399355 DEPDC5O75140 1603 aa15.21■□□□□ 0.03
ITSN1-211ENST00000399355 A0A1W2PP64 1363 aa15.21■□□□□ 0.03
ITSN1-211ENST00000399355 RTL5Q5HYW3 569 aaPredicted RBP15.21■□□□□ 0.03
ITSN1-211ENST00000399355 RARSP54136 660 aaKnown RBP15.21■□□□□ 0.02
ITSN1-211ENST00000399355 EXOSC9Q06265 439 aaKnown RBP15.21■□□□□ 0.02
ITSN1-211ENST00000399355 TRMT2AQ8IZ69 625 aaKnown RBP15.21■□□□□ 0.02
ITSN1-211ENST00000399355 C1orf115Q9H7X2 142 aa15.21■□□□□ 0.02
ITSN1-211ENST00000399355 DCTN1Q14203 1278 aa15.2■□□□□ 0.02
ITSN1-211ENST00000399355 NKTRP30414 1462 aaKnown RBP15.2■□□□□ 0.02
ITSN1-211ENST00000399355 TSPOAP1O95153 1857 aa15.2■□□□□ 0.02
ITSN1-211ENST00000399355 E9PSI1 815 aa15.2■□□□□ 0.02
ITSN1-211ENST00000399355 RRS1Q15050 365 aaKnown RBP15.2■□□□□ 0.02
ITSN1-211ENST00000399355 FYB1O15117 783 aa15.19■□□□□ 0.02
ITSN1-211ENST00000399355 TXNDC2Q86VQ3 553 aa15.19■□□□□ 0.02
ITSN1-211ENST00000399355 PIK3C2GO75747 1445 aa15.19■□□□□ 0.02
ITSN1-211ENST00000399355 LAMC1P11047 1609 aa15.19■□□□□ 0.02
ITSN1-211ENST00000399355 RBM33Q96EV2 1170 aaKnown RBP15.19■□□□□ 0.02
ITSN1-211ENST00000399355 MYO5BQ9ULV0 1848 aa15.19■□□□□ 0.02
ITSN1-211ENST00000399355 EMILIN1Q9Y6C2 1016 aa15.19■□□□□ 0.02
ITSN1-211ENST00000399355 POGZQ7Z3K3 1410 aa15.18■□□□□ 0.02
ITSN1-211ENST00000399355 FAM83GA6ND36 823 aa15.18■□□□□ 0.02
ITSN1-211ENST00000399355 INSRP06213 1382 aa15.18■□□□□ 0.02
ITSN1-211ENST00000399355 PHACTR3Q96KR7 559 aa15.18■□□□□ 0.02
ITSN1-211ENST00000399355 VWDEQ8N2E2 1590 aa15.18■□□□□ 0.02
ITSN1-211ENST00000399355 CGNL1Q0VF96 1302 aa15.17■□□□□ 0.02
ITSN1-211ENST00000399355 CENPQQ7L2Z9 268 aaPredicted RBP15.17■□□□□ 0.02
ITSN1-211ENST00000399355 RUNDC1Q96C34 613 aa15.17■□□□□ 0.02
ITSN1-211ENST00000399355 CDK19Q9BWU1 502 aa15.17■□□□□ 0.02
ITSN1-211ENST00000399355 FRAT2O75474 233 aaPredicted RBP15.16■□□□□ 0.02
ITSN1-211ENST00000399355 KRT24Q2M2I5 525 aa15.16■□□□□ 0.02
ITSN1-211ENST00000399355 QRICH2Q9H0J4 1663 aa15.16■□□□□ 0.02
ITSN1-211ENST00000399355 NME9Q86XW9 330 aa15.15■□□□□ 0.02
ITSN1-211ENST00000399355 TULP4Q9NRJ4 1543 aa15.15■□□□□ 0.02
ITSN1-211ENST00000399355 ATAD2Q6PL18 1390 aa15.15■□□□□ 0.02
ITSN1-211ENST00000399355 EVC2Q86UK5 1308 aa15.15■□□□□ 0.02
ITSN1-211ENST00000399355 CEBPAP49715 358 aaPredicted RBP15.15■□□□□ 0.02
ITSN1-211ENST00000399355 ADGRB1O14514 1584 aa15.14■□□□□ 0.02
ITSN1-211ENST00000399355 SSH1Q8WYL5 1049 aa15.14■□□□□ 0.01
ITSN1-211ENST00000399355 SMC4Q9NTJ3 1288 aa15.14■□□□□ 0.01
ITSN1-211ENST00000399355 VGFO15240 615 aaPredicted RBP15.14■□□□□ 0.01
ITSN1-211ENST00000399355 RIPK4P57078 832 aa15.14■□□□□ 0.01
ITSN1-211ENST00000399355 TRIM35Q9UPQ4 493 aa15.14■□□□□ 0.01
ITSN1-211ENST00000399355 FAM161AQ3B820 660 aa15.13■□□□□ 0.01
ITSN1-211ENST00000399355 ITPRIPQ8IWB1 547 aa15.13■□□□□ 0.01
ITSN1-211ENST00000399355 TSPYL6Q8N831 410 aa15.13■□□□□ 0.01
ITSN1-211ENST00000399355 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.13■□□□□ 0.01
ITSN1-211ENST00000399355 ABCC3O15438 1527 aa15.13■□□□□ 0.01
ITSN1-211ENST00000399355 CAMSAP1Q5T5Y3 1602 aa15.13■□□□□ 0.01
ITSN1-211ENST00000399355 PDZRN3Q9UPQ7 1066 aa15.12■□□□□ 0.01
ITSN1-211ENST00000399355 ADGRB3O60242 1522 aa15.12■□□□□ 0.01
ITSN1-211ENST00000399355 TRIM27P14373 513 aa15.11■□□□□ 0.01
ITSN1-211ENST00000399355 PRKAR2BP31323 418 aa15.11■□□□□ 0.01
ITSN1-211ENST00000399355 TMPOP42166 694 aaKnown RBP15.11■□□□□ 0.01
ITSN1-211ENST00000399355 NFKBIBQ15653 356 aa15.11■□□□□ 0.01
ITSN1-211ENST00000399355 BRPF3Q9ULD4 1205 aa15.11■□□□□ 0.01
ITSN1-211ENST00000399355 NOB1Q9ULX3 412 aaKnown RBP15.11■□□□□ 0.01
ITSN1-211ENST00000399355 USP19O94966 1318 aa15.11■□□□□ 0.01
ITSN1-211ENST00000399355 FTSJ3Q8IY81 847 aaKnown RBP15.11■□□□□ 0.01
ITSN1-211ENST00000399355 ZNF428Q96B54 188 aa15.11■□□□□ 0.01
ITSN1-211ENST00000399355 GLI2P10070 1586 aa15.1■□□□□ 0.01
ITSN1-211ENST00000399355 SHPRHQ149N8 1683 aa15.1■□□□□ 0.01
ITSN1-211ENST00000399355 MYOM2P54296 1465 aa15.1■□□□□ 0.01
ITSN1-211ENST00000399355 MS4A1P11836 297 aa15.09■□□□□ 0.01
ITSN1-211ENST00000399355 APBB1O00213 710 aa15.09■□□□□ 0.01
ITSN1-211ENST00000399355 MIS18AQ9NYP9 233 aa15.09■□□□□ 0.01
ITSN1-211ENST00000399355 DAXXQ9UER7 740 aaPredicted RBP15.09■□□□□ 0.01
ITSN1-211ENST00000399355 NUTM2GQ5VZR2 741 aa15.09■□□□□ 0.01
ITSN1-211ENST00000399355 POLR3AO14802 1390 aaPredicted RBP15.09■□□□□ 0.01
ITSN1-211ENST00000399355 AEBP1Q8IUX7 1158 aa15.08■□□□□ 0.01
ITSN1-211ENST00000399355 CFAP53Q96M91 514 aa15.08■□□□□ 0.01
ITSN1-211ENST00000399355 IFT172Q9UG01 1749 aa15.08■□□□□ 0.01
ITSN1-211ENST00000399355 TMEM57Q8N5G2 664 aa15.08■□□□□ 0
ITSN1-211ENST00000399355 SLC26A8Q96RN1 970 aa15.08■□□□□ 0
ITSN1-211ENST00000399355 PPLO60437 1756 aa15.08■□□□□ 0
ITSN1-211ENST00000399355 PLEKHF1Q96S99 279 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms