RNA–Protein interactions for RNA: ENST00000399295.2

SMIM11A-202, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM11A, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-202ENST00000399295 NALCNQ8IZF0 1738 aa25.1■■□□□ 1.61
SMIM11A-202ENST00000399295 PRAM1Q96QH2 718 aa25.09■■□□□ 1.61
SMIM11A-202ENST00000399295 POGKQ9P215 609 aa25.08■■□□□ 1.61
SMIM11A-202ENST00000399295 ROBO1Q9Y6N7 1651 aa25.07■■□□□ 1.6
SMIM11A-202ENST00000399295 MST1RQ04912 1400 aa25.07■■□□□ 1.6
SMIM11A-202ENST00000399295 TONSLQ96HA7 1378 aa25.06■■□□□ 1.6
SMIM11A-202ENST00000399295 NBPF1Q3BBV0 1214 aa25.06■■□□□ 1.6
SMIM11A-202ENST00000399295 DLC1Q96QB1 1528 aa25.06■■□□□ 1.6
SMIM11A-202ENST00000399295 SAFB2Q14151 953 aaKnown RBP eCLIP25.05■■□□□ 1.6
SMIM11A-202ENST00000399295 BRINP3Q76B58 766 aa25.04■■□□□ 1.6
SMIM11A-202ENST00000399295 KIAA1210Q9ULL0 1709 aa25.02■■□□□ 1.6
SMIM11A-202ENST00000399295 C1orf167Q5SNV9 1468 aa25■■□□□ 1.59
SMIM11A-202ENST00000399295 CDC42BPGQ6DT37 1551 aa24.99■■□□□ 1.59
SMIM11A-202ENST00000399295 NBPF8Q3BBV2 869 aa24.97■■□□□ 1.59
SMIM11A-202ENST00000399295 NUTM2FA1L443 756 aa24.96■■□□□ 1.59
SMIM11A-202ENST00000399295 ORAI2Q96SN7 254 aa24.96■■□□□ 1.59
SMIM11A-202ENST00000399295 MINK1Q8N4C8 1332 aaPredicted RBP24.94■■□□□ 1.58
SMIM11A-202ENST00000399295 HIRIP3Q9BW71 556 aaPredicted RBP24.94■■□□□ 1.58
SMIM11A-202ENST00000399295 ESCO1Q5FWF5 840 aa24.93■■□□□ 1.58
SMIM11A-202ENST00000399295 ROCK2O75116 1388 aaKnown RBP24.93■■□□□ 1.58
SMIM11A-202ENST00000399295 AHDC1Q5TGY3 1603 aaPredicted RBP24.92■■□□□ 1.58
SMIM11A-202ENST00000399295 PHLPP1O60346 1717 aa24.92■■□□□ 1.58
SMIM11A-202ENST00000399295 TRPM1Q7Z4N2 1603 aa24.9■■□□□ 1.58
SMIM11A-202ENST00000399295 ARHGEF28Q8N1W1 1705 aaKnown RBP24.89■■□□□ 1.58
SMIM11A-202ENST00000399295 DDX17Q92841 729 aaKnown RBP24.89■■□□□ 1.58
SMIM11A-202ENST00000399295 JCADQ9P266 1359 aa24.89■■□□□ 1.57
SMIM11A-202ENST00000399295 FMN2Q9NZ56 1722 aa24.87■■□□□ 1.57
SMIM11A-202ENST00000399295 WASLO00401 505 aaPredicted RBP24.87■■□□□ 1.57
SMIM11A-202ENST00000399295 TIMELESSQ9UNS1 1208 aa24.87■■□□□ 1.57
SMIM11A-202ENST00000399295 CENPJQ9HC77 1338 aaPredicted RBP24.86■■□□□ 1.57
SMIM11A-202ENST00000399295 ADGRB2O60241 1585 aa24.86■■□□□ 1.57
SMIM11A-202ENST00000399295 COL16A1Q07092 1604 aaPredicted RBP24.86■■□□□ 1.57
SMIM11A-202ENST00000399295 GPRASP1Q5JY77 1395 aa24.84■■□□□ 1.57
SMIM11A-202ENST00000399295 LRRC59Q96AG4 307 aaKnown RBP24.84■■□□□ 1.57
SMIM11A-202ENST00000399295 MED1Q15648 1581 aaPredicted RBP24.84■■□□□ 1.57
SMIM11A-202ENST00000399295 NHSL1Q5SYE7 1610 aa24.83■■□□□ 1.57
SMIM11A-202ENST00000399295 EIF3AQ14152 1382 aaKnown RBP24.83■■□□□ 1.57
SMIM11A-202ENST00000399295 FOXO3O43524 673 aa24.83■■□□□ 1.57
SMIM11A-202ENST00000399295 CARD11Q9BXL7 1154 aa24.83■■□□□ 1.57
SMIM11A-202ENST00000399295 ANKARQ7Z5J8 1434 aa24.82■■□□□ 1.56
SMIM11A-202ENST00000399295 RALGAPBQ86X10 1494 aa24.82■■□□□ 1.56
SMIM11A-202ENST00000399295 SPATA31A6Q5VVP1 1343 aa24.82■■□□□ 1.56
SMIM11A-202ENST00000399295 NPHP3Q7Z494 1330 aa24.82■■□□□ 1.56
SMIM11A-202ENST00000399295 PHF8Q9UPP1 1060 aa24.81■■□□□ 1.56
SMIM11A-202ENST00000399295 SOS2Q07890 1332 aaPredicted RBP24.81■■□□□ 1.56
SMIM11A-202ENST00000399295 CDK19Q9BWU1 502 aa24.8■■□□□ 1.56
SMIM11A-202ENST00000399295 PRR36Q9H6K5 1346 aa24.78■■□□□ 1.56
SMIM11A-202ENST00000399295 PHF23Q9BUL5 403 aaPredicted RBP24.77■■□□□ 1.56
SMIM11A-202ENST00000399295 TULP4Q9NRJ4 1543 aa24.76■■□□□ 1.55
SMIM11A-202ENST00000399295 XPCQ01831 940 aaPredicted RBP24.76■■□□□ 1.55
SMIM11A-202ENST00000399295 PMFBP1Q8TBY8 1022 aa24.76■■□□□ 1.55
SMIM11A-202ENST00000399295 NUDT16Q96DE0 195 aaKnown RBP24.76■■□□□ 1.55
SMIM11A-202ENST00000399295 SHPRHQ149N8 1683 aa24.75■■□□□ 1.55
SMIM11A-202ENST00000399295 USP32Q8NFA0 1604 aa24.75■■□□□ 1.55
SMIM11A-202ENST00000399295 KIF1AQ12756 1690 aa24.73■■□□□ 1.55
SMIM11A-202ENST00000399295 SRPK2P78362 688 aaKnown RBP24.73■■□□□ 1.55
SMIM11A-202ENST00000399295 KRT28Q7Z3Y7 464 aa24.73■■□□□ 1.55
SMIM11A-202ENST00000399295 RGPD8O14715 1765 aaPredicted RBP24.72■■□□□ 1.55
SMIM11A-202ENST00000399295 PXDNQ92626 1479 aa24.72■■□□□ 1.55
SMIM11A-202ENST00000399295 PSME1Q06323 249 aa24.72■■□□□ 1.55
SMIM11A-202ENST00000399295 QRICH2Q9H0J4 1663 aa24.72■■□□□ 1.55
SMIM11A-202ENST00000399295 PNPLA6Q8IY17 1366 aa24.7■■□□□ 1.55
SMIM11A-202ENST00000399295 CABP2Q9NPB3 220 aa24.7■■□□□ 1.54
SMIM11A-202ENST00000399295 CCDC61Q9Y6R9 512 aa24.7■■□□□ 1.54
SMIM11A-202ENST00000399295 ATP7BP35670 1465 aa24.7■■□□□ 1.54
SMIM11A-202ENST00000399295 EVC2Q86UK5 1308 aa24.69■■□□□ 1.54
SMIM11A-202ENST00000399295 NUTM2BA6NNL0 878 aaPredicted RBP24.68■■□□□ 1.54
SMIM11A-202ENST00000399295 NUTM2EB1AL46 878 aaPredicted RBP24.68■■□□□ 1.54
SMIM11A-202ENST00000399295 NUTM2AQ8IVF1 878 aaPredicted RBP24.68■■□□□ 1.54
SMIM11A-202ENST00000399295 NGDNQ8NEJ9 315 aaKnown RBP24.68■■□□□ 1.54
SMIM11A-202ENST00000399295 SPATA31A3Q5VYP0 1347 aa24.65■■□□□ 1.54
SMIM11A-202ENST00000399295 MEX3CQ5U5Q3 659 aaKnown RBP24.64■■□□□ 1.54
SMIM11A-202ENST00000399295 SBNO2Q9Y2G9 1366 aa24.64■■□□□ 1.53
SMIM11A-202ENST00000399295 PLEKHG3A1L390 1219 aa24.63■■□□□ 1.53
SMIM11A-202ENST00000399295 LRP6O75581 1613 aa24.63■■□□□ 1.53
SMIM11A-202ENST00000399295 ST20-MTHFSA0A0A6YYL1 179 aa24.62■■□□□ 1.53
SMIM11A-202ENST00000399295 SBNO1A3KN83 1393 aa24.62■■□□□ 1.53
SMIM11A-202ENST00000399295 ITSN1Q15811 1721 aa24.61■■□□□ 1.53
SMIM11A-202ENST00000399295 ACEP12821 1306 aa24.61■■□□□ 1.53
SMIM11A-202ENST00000399295 LMOD2Q6P5Q4 547 aa24.6■■□□□ 1.53
SMIM11A-202ENST00000399295 PPIP5K1Q6PFW1 1433 aa24.6■■□□□ 1.53
SMIM11A-202ENST00000399295 CABP1Q9NZU7 370 aa24.59■■□□□ 1.53
SMIM11A-202ENST00000399295 TNS3Q68CZ2 1445 aa24.59■■□□□ 1.53
SMIM11A-202ENST00000399295 POLR3AO14802 1390 aaPredicted RBP24.58■■□□□ 1.53
SMIM11A-202ENST00000399295 USP47Q96K76 1375 aa24.58■■□□□ 1.53
SMIM11A-202ENST00000399295 ZNF772Q68DY9 489 aaPredicted RBP24.58■■□□□ 1.53
SMIM11A-202ENST00000399295 ADAMTS2O95450 1211 aa24.57■■□□□ 1.52
SMIM11A-202ENST00000399295 RGS17Q9UGC6 210 aaPredicted RBP24.57■■□□□ 1.52
SMIM11A-202ENST00000399295 TOPAZ1Q8N9V7 1692 aa24.56■■□□□ 1.52
SMIM11A-202ENST00000399295 SLC24A1O60721 1099 aa24.56■■□□□ 1.52
SMIM11A-202ENST00000399295 PAK3O75914 559 aaPredicted RBP24.56■■□□□ 1.52
SMIM11A-202ENST00000399295 TESK2Q96S53 571 aa24.56■■□□□ 1.52
SMIM11A-202ENST00000399295 ARHGEF10O15013 1369 aa24.55■■□□□ 1.52
SMIM11A-202ENST00000399295 COL22A1Q8NFW1 1626 aaPredicted RBP24.55■■□□□ 1.52
SMIM11A-202ENST00000399295 ATAD2Q6PL18 1390 aa24.54■■□□□ 1.52
SMIM11A-202ENST00000399295 C8orf37Q96NL8 207 aa24.52■■□□□ 1.52
SMIM11A-202ENST00000399295 PLEKHG5O94827 1062 aa24.51■■□□□ 1.51
SMIM11A-202ENST00000399295 TRPM3Q9HCF6 1732 aaPredicted RBP24.5■■□□□ 1.51
SMIM11A-202ENST00000399295 HAP1P54257 671 aaPredicted RBP24.5■■□□□ 1.51
SMIM11A-202ENST00000399295 CABLES1Q8TDN4 633 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms