RNA–Protein interactions for RNA: ENST00000398035.6

COLCA2-201, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-201ENST00000398035 ROBO1Q9Y6N7 1651 aa26.95■■□□□ 1.9
COLCA2-201ENST00000398035 SAFB2Q14151 953 aaKnown RBP eCLIP26.94■■□□□ 1.9
COLCA2-201ENST00000398035 CLSPNQ9HAW4 1339 aa26.94■■□□□ 1.9
COLCA2-201ENST00000398035 NBPF1Q3BBV0 1214 aa26.93■■□□□ 1.9
COLCA2-201ENST00000398035 ESCO1Q5FWF5 840 aa26.91■■□□□ 1.9
COLCA2-201ENST00000398035 KNDC1Q76NI1 1749 aa26.91■■□□□ 1.9
COLCA2-201ENST00000398035 ORAI2Q96SN7 254 aa26.9■■□□□ 1.9
COLCA2-201ENST00000398035 LRRC59Q96AG4 307 aaKnown RBP26.9■■□□□ 1.9
COLCA2-201ENST00000398035 NALCNQ8IZF0 1738 aa26.88■■□□□ 1.89
COLCA2-201ENST00000398035 JCADQ9P266 1359 aa26.88■■□□□ 1.89
COLCA2-201ENST00000398035 CDC42BPGQ6DT37 1551 aa26.88■■□□□ 1.89
COLCA2-201ENST00000398035 TIMELESSQ9UNS1 1208 aa26.87■■□□□ 1.89
COLCA2-201ENST00000398035 NUTM2FA1L443 756 aa26.85■■□□□ 1.89
COLCA2-201ENST00000398035 DISP3Q9P2K9 1392 aa26.84■■□□□ 1.89
COLCA2-201ENST00000398035 MINK1Q8N4C8 1332 aaPredicted RBP26.84■■□□□ 1.89
COLCA2-201ENST00000398035 WASLO00401 505 aaPredicted RBP26.83■■□□□ 1.89
COLCA2-201ENST00000398035 EIF3AQ14152 1382 aaKnown RBP26.83■■□□□ 1.89
COLCA2-201ENST00000398035 KIAA1210Q9ULL0 1709 aa26.83■■□□□ 1.89
COLCA2-201ENST00000398035 NPHP3Q7Z494 1330 aa26.83■■□□□ 1.89
COLCA2-201ENST00000398035 AHDC1Q5TGY3 1603 aaPredicted RBP26.82■■□□□ 1.88
COLCA2-201ENST00000398035 HIRIP3Q9BW71 556 aaPredicted RBP26.82■■□□□ 1.88
COLCA2-201ENST00000398035 ROCK2O75116 1388 aaKnown RBP26.82■■□□□ 1.88
COLCA2-201ENST00000398035 NBPF8Q3BBV2 869 aa26.81■■□□□ 1.88
COLCA2-201ENST00000398035 SOS2Q07890 1332 aaPredicted RBP26.8■■□□□ 1.88
COLCA2-201ENST00000398035 SPATA31A6Q5VVP1 1343 aa26.8■■□□□ 1.88
COLCA2-201ENST00000398035 FOXO3O43524 673 aa26.79■■□□□ 1.88
COLCA2-201ENST00000398035 CCER1Q8TC90 406 aaPredicted RBP26.78■■□□□ 1.88
COLCA2-201ENST00000398035 DDX17Q92841 729 aaKnown RBP26.78■■□□□ 1.88
COLCA2-201ENST00000398035 CENPJQ9HC77 1338 aaPredicted RBP26.78■■□□□ 1.88
COLCA2-201ENST00000398035 ANKARQ7Z5J8 1434 aa26.77■■□□□ 1.88
COLCA2-201ENST00000398035 PHF8Q9UPP1 1060 aa26.77■■□□□ 1.88
COLCA2-201ENST00000398035 PHLPP1O60346 1717 aa26.76■■□□□ 1.88
COLCA2-201ENST00000398035 PHF23Q9BUL5 403 aaPredicted RBP26.75■■□□□ 1.87
COLCA2-201ENST00000398035 CARD11Q9BXL7 1154 aa26.74■■□□□ 1.87
COLCA2-201ENST00000398035 GPRASP1Q5JY77 1395 aa26.74■■□□□ 1.87
COLCA2-201ENST00000398035 PSME1Q06323 249 aa26.73■■□□□ 1.87
COLCA2-201ENST00000398035 CDK19Q9BWU1 502 aa26.73■■□□□ 1.87
COLCA2-201ENST00000398035 COL16A1Q07092 1604 aaPredicted RBP26.73■■□□□ 1.87
COLCA2-201ENST00000398035 ADGRB2O60241 1585 aa26.71■■□□□ 1.87
COLCA2-201ENST00000398035 NUDT16Q96DE0 195 aaKnown RBP26.7■■□□□ 1.86
COLCA2-201ENST00000398035 KRT28Q7Z3Y7 464 aa26.69■■□□□ 1.86
COLCA2-201ENST00000398035 CCDC61Q9Y6R9 512 aa26.68■■□□□ 1.86
COLCA2-201ENST00000398035 FMN2Q9NZ56 1722 aa26.67■■□□□ 1.86
COLCA2-201ENST00000398035 MED1Q15648 1581 aaPredicted RBP26.67■■□□□ 1.86
COLCA2-201ENST00000398035 PMFBP1Q8TBY8 1022 aa26.66■■□□□ 1.86
COLCA2-201ENST00000398035 NHSL1Q5SYE7 1610 aa26.66■■□□□ 1.86
COLCA2-201ENST00000398035 PRR36Q9H6K5 1346 aa26.66■■□□□ 1.86
COLCA2-201ENST00000398035 SRPK2P78362 688 aaKnown RBP26.65■■□□□ 1.86
COLCA2-201ENST00000398035 TRPM1Q7Z4N2 1603 aa26.65■■□□□ 1.86
COLCA2-201ENST00000398035 EVC2Q86UK5 1308 aa26.65■■□□□ 1.86
COLCA2-201ENST00000398035 TULP4Q9NRJ4 1543 aa26.65■■□□□ 1.86
COLCA2-201ENST00000398035 XPCQ01831 940 aaPredicted RBP26.65■■□□□ 1.86
COLCA2-201ENST00000398035 MEX3CQ5U5Q3 659 aaKnown RBP26.65■■□□□ 1.86
COLCA2-201ENST00000398035 NGDNQ8NEJ9 315 aaKnown RBP26.65■■□□□ 1.86
COLCA2-201ENST00000398035 PNPLA6Q8IY17 1366 aa26.64■■□□□ 1.86
COLCA2-201ENST00000398035 ARHGEF28Q8N1W1 1705 aaKnown RBP26.64■■□□□ 1.85
COLCA2-201ENST00000398035 SLC24A1O60721 1099 aa26.64■■□□□ 1.85
COLCA2-201ENST00000398035 RALGAPBQ86X10 1494 aa26.63■■□□□ 1.85
COLCA2-201ENST00000398035 NUTM2BA6NNL0 878 aaPredicted RBP26.63■■□□□ 1.85
COLCA2-201ENST00000398035 NUTM2EB1AL46 878 aaPredicted RBP26.63■■□□□ 1.85
COLCA2-201ENST00000398035 NUTM2AQ8IVF1 878 aaPredicted RBP26.63■■□□□ 1.85
COLCA2-201ENST00000398035 SPATA31A3Q5VYP0 1347 aa26.61■■□□□ 1.85
COLCA2-201ENST00000398035 PXDNQ92626 1479 aa26.61■■□□□ 1.85
COLCA2-201ENST00000398035 PLEKHG3A1L390 1219 aa26.6■■□□□ 1.85
COLCA2-201ENST00000398035 SBNO1A3KN83 1393 aa26.59■■□□□ 1.85
COLCA2-201ENST00000398035 KIF1AQ12756 1690 aa26.58■■□□□ 1.85
COLCA2-201ENST00000398035 CABP2Q9NPB3 220 aa26.57■■□□□ 1.84
COLCA2-201ENST00000398035 SHPRHQ149N8 1683 aa26.56■■□□□ 1.84
COLCA2-201ENST00000398035 SBNO2Q9Y2G9 1366 aa26.56■■□□□ 1.84
COLCA2-201ENST00000398035 ZNF772Q68DY9 489 aaPredicted RBP26.55■■□□□ 1.84
COLCA2-201ENST00000398035 ATP7BP35670 1465 aa26.54■■□□□ 1.84
COLCA2-201ENST00000398035 ARHGEF10O15013 1369 aa26.53■■□□□ 1.84
COLCA2-201ENST00000398035 LMOD2Q6P5Q4 547 aa26.53■■□□□ 1.84
COLCA2-201ENST00000398035 RGS17Q9UGC6 210 aaPredicted RBP26.53■■□□□ 1.84
COLCA2-201ENST00000398035 ACEP12821 1306 aa26.52■■□□□ 1.84
COLCA2-201ENST00000398035 USP32Q8NFA0 1604 aa26.51■■□□□ 1.83
COLCA2-201ENST00000398035 PUS7Q96PZ0 661 aaKnown RBP26.5■■□□□ 1.83
COLCA2-201ENST00000398035 LRP6O75581 1613 aa26.5■■□□□ 1.83
COLCA2-201ENST00000398035 POLR3AO14802 1390 aaPredicted RBP26.5■■□□□ 1.83
COLCA2-201ENST00000398035 TNS3Q68CZ2 1445 aa26.5■■□□□ 1.83
COLCA2-201ENST00000398035 ADAMTS2O95450 1211 aa26.49■■□□□ 1.83
COLCA2-201ENST00000398035 CABP1Q9NZU7 370 aa26.49■■□□□ 1.83
COLCA2-201ENST00000398035 ST20-MTHFSA0A0A6YYL1 179 aa26.48■■□□□ 1.83
COLCA2-201ENST00000398035 PAK3O75914 559 aaPredicted RBP26.48■■□□□ 1.83
COLCA2-201ENST00000398035 ILDR2Q71H61 639 aa26.48■■□□□ 1.83
COLCA2-201ENST00000398035 NGLY1Q96IV0 654 aa26.48■■□□□ 1.83
COLCA2-201ENST00000398035 HAP1P54257 671 aaPredicted RBP26.48■■□□□ 1.83
COLCA2-201ENST00000398035 C8orf37Q96NL8 207 aa26.48■■□□□ 1.83
COLCA2-201ENST00000398035 ATAD2Q6PL18 1390 aa26.47■■□□□ 1.83
COLCA2-201ENST00000398035 PPIP5K1Q6PFW1 1433 aa26.47■■□□□ 1.83
COLCA2-201ENST00000398035 ZNF692Q9BU19 519 aaPredicted RBP26.47■■□□□ 1.83
COLCA2-201ENST00000398035 BRD4O60885 1362 aaPredicted RBP26.46■■□□□ 1.83
COLCA2-201ENST00000398035 QRICH2Q9H0J4 1663 aa26.43■■□□□ 1.82
COLCA2-201ENST00000398035 AFF2P51816 1311 aa26.42■■□□□ 1.82
COLCA2-201ENST00000398035 TESK2Q96S53 571 aa26.42■■□□□ 1.82
COLCA2-201ENST00000398035 RGPD8O14715 1765 aaPredicted RBP26.41■■□□□ 1.82
COLCA2-201ENST00000398035 POTEAQ6S8J7 498 aa26.41■■□□□ 1.82
COLCA2-201ENST00000398035 FNBP4Q8N3X1 1017 aaPredicted RBP26.41■■□□□ 1.82
COLCA2-201ENST00000398035 USP47Q96K76 1375 aa26.41■■□□□ 1.82
COLCA2-201ENST00000398035 COL22A1Q8NFW1 1626 aaPredicted RBP26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms