RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 PLEKHH1Q9ULM0 1364 aa36.31■■■■□ 3.4
TSPAN4-207ENST00000397411 NBPF1Q3BBV0 1214 aa36.31■■■■□ 3.4
TSPAN4-207ENST00000397411 CLSPNQ9HAW4 1339 aa36.3■■■■□ 3.4
TSPAN4-207ENST00000397411 ROBO1Q9Y6N7 1651 aa36.27■■■■□ 3.4
TSPAN4-207ENST00000397411 DLC1Q96QB1 1528 aa36.25■■■■□ 3.39
TSPAN4-207ENST00000397411 MST1RQ04912 1400 aa36.22■■■■□ 3.39
TSPAN4-207ENST00000397411 NBPF8Q3BBV2 869 aa36.2■■■■□ 3.39
TSPAN4-207ENST00000397411 NUTM2FA1L443 756 aa36.18■■■■□ 3.38
TSPAN4-207ENST00000397411 BRINP3Q76B58 766 aa36.18■■■■□ 3.38
TSPAN4-207ENST00000397411 ROCK2O75116 1388 aaKnown RBP36.17■■■■□ 3.38
TSPAN4-207ENST00000397411 MINK1Q8N4C8 1332 aaPredicted RBP36.17■■■■□ 3.38
TSPAN4-207ENST00000397411 TRPM1Q7Z4N2 1603 aa36.16■■■■□ 3.38
TSPAN4-207ENST00000397411 CDC42BPGQ6DT37 1551 aa36.15■■■■□ 3.38
TSPAN4-207ENST00000397411 C1orf167Q5SNV9 1468 aa36.14■■■■□ 3.38
TSPAN4-207ENST00000397411 HIRIP3Q9BW71 556 aaPredicted RBP36.14■■■■□ 3.38
TSPAN4-207ENST00000397411 ESCO1Q5FWF5 840 aa36.12■■■■□ 3.37
TSPAN4-207ENST00000397411 TIMELESSQ9UNS1 1208 aa36.12■■■■□ 3.37
TSPAN4-207ENST00000397411 ARHGEF28Q8N1W1 1705 aaKnown RBP36.11■■■■□ 3.37
TSPAN4-207ENST00000397411 ORAI2Q96SN7 254 aa36.11■■■■□ 3.37
TSPAN4-207ENST00000397411 PHLPP1O60346 1717 aa36.09■■■■□ 3.37
TSPAN4-207ENST00000397411 CARD11Q9BXL7 1154 aa36.06■■■■□ 3.36
TSPAN4-207ENST00000397411 CENPJQ9HC77 1338 aaPredicted RBP36.05■■■■□ 3.36
TSPAN4-207ENST00000397411 FMN2Q9NZ56 1722 aa36.04■■■■□ 3.36
TSPAN4-207ENST00000397411 WASLO00401 505 aaPredicted RBP36.02■■■■□ 3.36
TSPAN4-207ENST00000397411 DDX17Q92841 729 aaKnown RBP36■■■■□ 3.35
TSPAN4-207ENST00000397411 EIF3AQ14152 1382 aaKnown RBP35.99■■■■□ 3.35
TSPAN4-207ENST00000397411 AHDC1Q5TGY3 1603 aaPredicted RBP35.98■■■■□ 3.35
TSPAN4-207ENST00000397411 RALGAPBQ86X10 1494 aa35.98■■■■□ 3.35
TSPAN4-207ENST00000397411 ADGRB2O60241 1585 aa35.98■■■■□ 3.35
TSPAN4-207ENST00000397411 GPRASP1Q5JY77 1395 aa35.96■■■■□ 3.35
TSPAN4-207ENST00000397411 CDK19Q9BWU1 502 aa35.95■■■■□ 3.35
TSPAN4-207ENST00000397411 RGPD8O14715 1765 aaPredicted RBP35.94■■■■□ 3.34
TSPAN4-207ENST00000397411 FOXO3O43524 673 aa35.93■■■■□ 3.34
TSPAN4-207ENST00000397411 PHF8Q9UPP1 1060 aa35.93■■■■□ 3.34
TSPAN4-207ENST00000397411 LRRC59Q96AG4 307 aaKnown RBP35.92■■■■□ 3.34
TSPAN4-207ENST00000397411 NHSL1Q5SYE7 1610 aa35.92■■■■□ 3.34
TSPAN4-207ENST00000397411 JCADQ9P266 1359 aa35.91■■■■□ 3.34
TSPAN4-207ENST00000397411 NPHP3Q7Z494 1330 aa35.91■■■■□ 3.34
TSPAN4-207ENST00000397411 ANKARQ7Z5J8 1434 aa35.91■■■■□ 3.34
TSPAN4-207ENST00000397411 COL16A1Q07092 1604 aaPredicted RBP35.9■■■■□ 3.34
TSPAN4-207ENST00000397411 QRICH2Q9H0J4 1663 aa35.9■■■■□ 3.34
TSPAN4-207ENST00000397411 SRPK2P78362 688 aaKnown RBP35.88■■■■□ 3.33
TSPAN4-207ENST00000397411 PMFBP1Q8TBY8 1022 aa35.87■■■■□ 3.33
TSPAN4-207ENST00000397411 NUDT16Q96DE0 195 aaKnown RBP35.87■■■■□ 3.33
TSPAN4-207ENST00000397411 TULP4Q9NRJ4 1543 aa35.86■■■■□ 3.33
TSPAN4-207ENST00000397411 XPCQ01831 940 aaPredicted RBP35.85■■■■□ 3.33
TSPAN4-207ENST00000397411 KIF1AQ12756 1690 aa35.84■■■■□ 3.33
TSPAN4-207ENST00000397411 PSME1Q06323 249 aa35.84■■■■□ 3.33
TSPAN4-207ENST00000397411 SOS2Q07890 1332 aaPredicted RBP35.83■■■■□ 3.33
TSPAN4-207ENST00000397411 PRR36Q9H6K5 1346 aa35.83■■■■□ 3.33
TSPAN4-207ENST00000397411 EVC2Q86UK5 1308 aa35.83■■■■□ 3.33
TSPAN4-207ENST00000397411 KRT28Q7Z3Y7 464 aa35.82■■■■□ 3.32
TSPAN4-207ENST00000397411 USP32Q8NFA0 1604 aa35.81■■■■□ 3.32
TSPAN4-207ENST00000397411 NGDNQ8NEJ9 315 aaKnown RBP35.8■■■■□ 3.32
TSPAN4-207ENST00000397411 CABP2Q9NPB3 220 aa35.8■■■■□ 3.32
TSPAN4-207ENST00000397411 CCDC61Q9Y6R9 512 aa35.78■■■■□ 3.32
TSPAN4-207ENST00000397411 DISP3Q9P2K9 1392 aa35.77■■■■□ 3.32
TSPAN4-207ENST00000397411 SPATA31A6Q5VVP1 1343 aa35.76■■■■□ 3.31
TSPAN4-207ENST00000397411 NUTM2BA6NNL0 878 aaPredicted RBP35.75■■■■□ 3.31
TSPAN4-207ENST00000397411 NUTM2EB1AL46 878 aaPredicted RBP35.75■■■■□ 3.31
TSPAN4-207ENST00000397411 NUTM2AQ8IVF1 878 aaPredicted RBP35.75■■■■□ 3.31
TSPAN4-207ENST00000397411 ITSN1Q15811 1721 aa35.74■■■■□ 3.31
TSPAN4-207ENST00000397411 PHF23Q9BUL5 403 aaPredicted RBP35.74■■■■□ 3.31
TSPAN4-207ENST00000397411 MED1Q15648 1581 aaPredicted RBP35.73■■■■□ 3.31
TSPAN4-207ENST00000397411 SHPRHQ149N8 1683 aa35.73■■■■□ 3.31
TSPAN4-207ENST00000397411 ST20-MTHFSA0A0A6YYL1 179 aa35.72■■■■□ 3.31
TSPAN4-207ENST00000397411 ATP7BP35670 1465 aa35.72■■■■□ 3.31
TSPAN4-207ENST00000397411 PXDNQ92626 1479 aa35.72■■■■□ 3.31
TSPAN4-207ENST00000397411 MEX3CQ5U5Q3 659 aaKnown RBP35.71■■■■□ 3.31
TSPAN4-207ENST00000397411 PNPLA6Q8IY17 1366 aa35.69■■■■□ 3.3
TSPAN4-207ENST00000397411 LMOD2Q6P5Q4 547 aa35.69■■■■□ 3.3
TSPAN4-207ENST00000397411 USP47Q96K76 1375 aa35.67■■■■□ 3.3
TSPAN4-207ENST00000397411 SLC24A1O60721 1099 aa35.67■■■■□ 3.3
TSPAN4-207ENST00000397411 SBNO2Q9Y2G9 1366 aa35.65■■■■□ 3.3
TSPAN4-207ENST00000397411 SPATA31A3Q5VYP0 1347 aa35.65■■■■□ 3.3
TSPAN4-207ENST00000397411 PLEKHG3A1L390 1219 aa35.65■■■■□ 3.3
TSPAN4-207ENST00000397411 ACEP12821 1306 aa35.64■■■■□ 3.3
TSPAN4-207ENST00000397411 PAK3O75914 559 aaPredicted RBP35.64■■■■□ 3.3
TSPAN4-207ENST00000397411 PPIP5K1Q6PFW1 1433 aa35.64■■■■□ 3.3
TSPAN4-207ENST00000397411 CABP1Q9NZU7 370 aa35.63■■■■□ 3.29
TSPAN4-207ENST00000397411 SBNO1A3KN83 1393 aa35.61■■■■□ 3.29
TSPAN4-207ENST00000397411 TOPAZ1Q8N9V7 1692 aa35.59■■■■□ 3.29
TSPAN4-207ENST00000397411 PLEKHG5O94827 1062 aa35.59■■■■□ 3.29
TSPAN4-207ENST00000397411 ATAD2Q6PL18 1390 aa35.57■■■■□ 3.28
TSPAN4-207ENST00000397411 TESK2Q96S53 571 aa35.57■■■■□ 3.28
TSPAN4-207ENST00000397411 TNS3Q68CZ2 1445 aa35.57■■■■□ 3.28
TSPAN4-207ENST00000397411 HAP1P54257 671 aaPredicted RBP35.56■■■■□ 3.28
TSPAN4-207ENST00000397411 ADAMTS2O95450 1211 aa35.55■■■■□ 3.28
TSPAN4-207ENST00000397411 POLR3AO14802 1390 aaPredicted RBP35.54■■■■□ 3.28
TSPAN4-207ENST00000397411 TMF1P82094 1093 aa35.54■■■■□ 3.28
TSPAN4-207ENST00000397411 TMC1Q8TDI8 760 aa35.54■■■■□ 3.28
TSPAN4-207ENST00000397411 LRP6O75581 1613 aa35.54■■■■□ 3.28
TSPAN4-207ENST00000397411 ARHGEF10O15013 1369 aa35.53■■■■□ 3.28
TSPAN4-207ENST00000397411 EIF4G2P78344 907 aaKnown RBP eCLIP35.51■■■■□ 3.28
TSPAN4-207ENST00000397411 COL22A1Q8NFW1 1626 aaPredicted RBP35.5■■■■□ 3.27
TSPAN4-207ENST00000397411 PUS7Q96PZ0 661 aaKnown RBP35.49■■■■□ 3.27
TSPAN4-207ENST00000397411 C8orf37Q96NL8 207 aa35.48■■■■□ 3.27
TSPAN4-207ENST00000397411 ZNF692Q9BU19 519 aaPredicted RBP35.48■■■■□ 3.27
TSPAN4-207ENST00000397411 TRPM3Q9HCF6 1732 aaPredicted RBP35.47■■■■□ 3.27
TSPAN4-207ENST00000397411 CABLES1Q8TDN4 633 aa35.46■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms