RNA–Protein interactions for RNA: ENST00000396654.6

AP1S3-203, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene AP1S3, Length 830 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-203ENST00000396654 CDC42BPGQ6DT37 1551 aa24.57■■□□□ 1.52
AP1S3-203ENST00000396654 ARHGEF28Q8N1W1 1705 aaKnown RBP24.57■■□□□ 1.52
AP1S3-203ENST00000396654 DLC1Q96QB1 1528 aa24.56■■□□□ 1.52
AP1S3-203ENST00000396654 NUTM2FA1L443 756 aa24.56■■□□□ 1.52
AP1S3-203ENST00000396654 BRINP3Q76B58 766 aa24.56■■□□□ 1.52
AP1S3-203ENST00000396654 POGKQ9P215 609 aa24.56■■□□□ 1.52
AP1S3-203ENST00000396654 C1orf167Q5SNV9 1468 aa24.54■■□□□ 1.52
AP1S3-203ENST00000396654 NBPF1Q3BBV0 1214 aa24.54■■□□□ 1.52
AP1S3-203ENST00000396654 FMN2Q9NZ56 1722 aa24.54■■□□□ 1.52
AP1S3-203ENST00000396654 RGPD8O14715 1765 aaPredicted RBP24.53■■□□□ 1.52
AP1S3-203ENST00000396654 COL16A1Q07092 1604 aaPredicted RBP24.52■■□□□ 1.52
AP1S3-203ENST00000396654 TONSLQ96HA7 1378 aa24.52■■□□□ 1.52
AP1S3-203ENST00000396654 NHSL1Q5SYE7 1610 aa24.51■■□□□ 1.51
AP1S3-203ENST00000396654 AHDC1Q5TGY3 1603 aaPredicted RBP24.51■■□□□ 1.51
AP1S3-203ENST00000396654 TRPM1Q7Z4N2 1603 aa24.51■■□□□ 1.51
AP1S3-203ENST00000396654 DDX17Q92841 729 aaKnown RBP24.51■■□□□ 1.51
AP1S3-203ENST00000396654 SIRT1Q96EB6 747 aa24.51■■□□□ 1.51
AP1S3-203ENST00000396654 ORAI2Q96SN7 254 aa24.5■■□□□ 1.51
AP1S3-203ENST00000396654 MINK1Q8N4C8 1332 aaPredicted RBP24.49■■□□□ 1.51
AP1S3-203ENST00000396654 MED1Q15648 1581 aaPredicted RBP24.49■■□□□ 1.51
AP1S3-203ENST00000396654 HIRIP3Q9BW71 556 aaPredicted RBP24.48■■□□□ 1.51
AP1S3-203ENST00000396654 DISP3Q9P2K9 1392 aa24.47■■□□□ 1.51
AP1S3-203ENST00000396654 NBPF8Q3BBV2 869 aa24.44■■□□□ 1.5
AP1S3-203ENST00000396654 ESCO1Q5FWF5 840 aa24.44■■□□□ 1.5
AP1S3-203ENST00000396654 ADGRB2O60241 1585 aa24.43■■□□□ 1.5
AP1S3-203ENST00000396654 USP32Q8NFA0 1604 aa24.4■■□□□ 1.5
AP1S3-203ENST00000396654 ROCK2O75116 1388 aaKnown RBP24.4■■□□□ 1.5
AP1S3-203ENST00000396654 QRICH2Q9H0J4 1663 aa24.4■■□□□ 1.5
AP1S3-203ENST00000396654 JCADQ9P266 1359 aa24.39■■□□□ 1.49
AP1S3-203ENST00000396654 SHPRHQ149N8 1683 aa24.38■■□□□ 1.49
AP1S3-203ENST00000396654 XPCQ01831 940 aaPredicted RBP24.37■■□□□ 1.49
AP1S3-203ENST00000396654 KIF1AQ12756 1690 aa24.37■■□□□ 1.49
AP1S3-203ENST00000396654 FOXO3O43524 673 aa24.35■■□□□ 1.49
AP1S3-203ENST00000396654 CCER1Q8TC90 406 aaPredicted RBP24.35■■□□□ 1.49
AP1S3-203ENST00000396654 WASLO00401 505 aaPredicted RBP24.33■■□□□ 1.49
AP1S3-203ENST00000396654 CENPJQ9HC77 1338 aaPredicted RBP24.33■■□□□ 1.48
AP1S3-203ENST00000396654 TULP4Q9NRJ4 1543 aa24.32■■□□□ 1.48
AP1S3-203ENST00000396654 PHF23Q9BUL5 403 aaPredicted RBP24.32■■□□□ 1.48
AP1S3-203ENST00000396654 NUTM2BA6NNL0 878 aaPredicted RBP24.31■■□□□ 1.48
AP1S3-203ENST00000396654 NUTM2EB1AL46 878 aaPredicted RBP24.31■■□□□ 1.48
AP1S3-203ENST00000396654 NUTM2AQ8IVF1 878 aaPredicted RBP24.31■■□□□ 1.48
AP1S3-203ENST00000396654 PHF8Q9UPP1 1060 aa24.31■■□□□ 1.48
AP1S3-203ENST00000396654 RALGAPBQ86X10 1494 aa24.31■■□□□ 1.48
AP1S3-203ENST00000396654 NPHP3Q7Z494 1330 aa24.31■■□□□ 1.48
AP1S3-203ENST00000396654 PRR36Q9H6K5 1346 aa24.31■■□□□ 1.48
AP1S3-203ENST00000396654 ANKARQ7Z5J8 1434 aa24.3■■□□□ 1.48
AP1S3-203ENST00000396654 PMFBP1Q8TBY8 1022 aa24.3■■□□□ 1.48
AP1S3-203ENST00000396654 LRRC59Q96AG4 307 aaKnown RBP24.3■■□□□ 1.48
AP1S3-203ENST00000396654 SOS2Q07890 1332 aaPredicted RBP24.3■■□□□ 1.48
AP1S3-203ENST00000396654 ITSN1Q15811 1721 aa24.3■■□□□ 1.48
AP1S3-203ENST00000396654 PXDNQ92626 1479 aa24.29■■□□□ 1.48
AP1S3-203ENST00000396654 PNPLA6Q8IY17 1366 aa24.29■■□□□ 1.48
AP1S3-203ENST00000396654 LRP6O75581 1613 aa24.28■■□□□ 1.48
AP1S3-203ENST00000396654 CDK19Q9BWU1 502 aa24.28■■□□□ 1.48
AP1S3-203ENST00000396654 EIF3AQ14152 1382 aaKnown RBP24.28■■□□□ 1.48
AP1S3-203ENST00000396654 CARD11Q9BXL7 1154 aa24.27■■□□□ 1.48
AP1S3-203ENST00000396654 CLSPNQ9HAW4 1339 aa24.26■■□□□ 1.47
AP1S3-203ENST00000396654 SPATA31A6Q5VVP1 1343 aa24.25■■□□□ 1.47
AP1S3-203ENST00000396654 GPRASP1Q5JY77 1395 aa24.25■■□□□ 1.47
AP1S3-203ENST00000396654 ATP7BP35670 1465 aa24.25■■□□□ 1.47
AP1S3-203ENST00000396654 MEX3CQ5U5Q3 659 aaKnown RBP24.24■■□□□ 1.47
AP1S3-203ENST00000396654 KRT28Q7Z3Y7 464 aa24.24■■□□□ 1.47
AP1S3-203ENST00000396654 NUDT16Q96DE0 195 aaKnown RBP24.23■■□□□ 1.47
AP1S3-203ENST00000396654 TOPAZ1Q8N9V7 1692 aa24.23■■□□□ 1.47
AP1S3-203ENST00000396654 SRPK2P78362 688 aaKnown RBP24.22■■□□□ 1.47
AP1S3-203ENST00000396654 PLEKHG5O94827 1062 aa24.21■■□□□ 1.47
AP1S3-203ENST00000396654 PSME1Q06323 249 aa24.21■■□□□ 1.47
AP1S3-203ENST00000396654 ILDR2Q71H61 639 aa24.21■■□□□ 1.47
AP1S3-203ENST00000396654 CABP2Q9NPB3 220 aa24.21■■□□□ 1.47
AP1S3-203ENST00000396654 COL22A1Q8NFW1 1626 aaPredicted RBP24.18■■□□□ 1.46
AP1S3-203ENST00000396654 NGDNQ8NEJ9 315 aaKnown RBP24.18■■□□□ 1.46
AP1S3-203ENST00000396654 TRPM3Q9HCF6 1732 aaPredicted RBP24.18■■□□□ 1.46
AP1S3-203ENST00000396654 LMOD2Q6P5Q4 547 aa24.17■■□□□ 1.46
AP1S3-203ENST00000396654 ADAMTS2O95450 1211 aa24.16■■□□□ 1.46
AP1S3-203ENST00000396654 RGS17Q9UGC6 210 aaPredicted RBP24.16■■□□□ 1.46
AP1S3-203ENST00000396654 SPATA31A3Q5VYP0 1347 aa24.15■■□□□ 1.46
AP1S3-203ENST00000396654 EVC2Q86UK5 1308 aa24.14■■□□□ 1.46
AP1S3-203ENST00000396654 TNS3Q68CZ2 1445 aa24.14■■□□□ 1.45
AP1S3-203ENST00000396654 PPIP5K1Q6PFW1 1433 aa24.13■■□□□ 1.45
AP1S3-203ENST00000396654 CCDC61Q9Y6R9 512 aa24.13■■□□□ 1.45
AP1S3-203ENST00000396654 TIMELESSQ9UNS1 1208 aa24.12■■□□□ 1.45
AP1S3-203ENST00000396654 MARF1Q9Y4F3 1742 aaKnown RBP24.12■■□□□ 1.45
AP1S3-203ENST00000396654 C8orf37Q96NL8 207 aa24.11■■□□□ 1.45
AP1S3-203ENST00000396654 SBNO1A3KN83 1393 aa24.11■■□□□ 1.45
AP1S3-203ENST00000396654 ALS2Q96Q42 1657 aa24.11■■□□□ 1.45
AP1S3-203ENST00000396654 PAK3O75914 559 aaPredicted RBP24.1■■□□□ 1.45
AP1S3-203ENST00000396654 ABCA3Q99758 1704 aa24.1■■□□□ 1.45
AP1S3-203ENST00000396654 ACEP12821 1306 aa24.1■■□□□ 1.45
AP1S3-203ENST00000396654 POTEAQ6S8J7 498 aa24.08■■□□□ 1.45
AP1S3-203ENST00000396654 CABLES1Q8TDN4 633 aa24.08■■□□□ 1.45
AP1S3-203ENST00000396654 AFF2P51816 1311 aa24.07■■□□□ 1.44
AP1S3-203ENST00000396654 ST20-MTHFSA0A0A6YYL1 179 aa24.06■■□□□ 1.44
AP1S3-203ENST00000396654 PLEKHG3A1L390 1219 aa24.06■■□□□ 1.44
AP1S3-203ENST00000396654 HAP1P54257 671 aaPredicted RBP24.06■■□□□ 1.44
AP1S3-203ENST00000396654 CABP1Q9NZU7 370 aa24.06■■□□□ 1.44
AP1S3-203ENST00000396654 POLR3AO14802 1390 aaPredicted RBP24.05■■□□□ 1.44
AP1S3-203ENST00000396654 USP47Q96K76 1375 aa24.05■■□□□ 1.44
AP1S3-203ENST00000396654 SBNO2Q9Y2G9 1366 aa24.05■■□□□ 1.44
AP1S3-203ENST00000396654 ARHGEF10O15013 1369 aa24.04■■□□□ 1.44
AP1S3-203ENST00000396654 NGLY1Q96IV0 654 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms