RNA–Protein interactions for RNA: ENST00000396610.6

CMC1-202, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2

Gene CMC1, Length 593 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-202ENST00000396610 IL21Q9HBE4 155 aa9.09□□□□□ -0.95
CMC1-202ENST00000396610 GOPCQ9HD26 462 aa9.09□□□□□ -0.95
CMC1-202ENST00000396610 GJA5P36382 358 aa9.08□□□□□ -0.96
CMC1-202ENST00000396610 SCUBE3Q8IX30 993 aa9.08□□□□□ -0.96
CMC1-202ENST00000396610 PCMTD1Q96MG8 357 aaPredicted RBP9.08□□□□□ -0.96
CMC1-202ENST00000396610 ZPR1O75312 459 aa9.07□□□□□ -0.96
CMC1-202ENST00000396610 QPCTQ16769 361 aa9.07□□□□□ -0.96
CMC1-202ENST00000396610 CABLES1Q8TDN4 633 aa9.07□□□□□ -0.96
CMC1-202ENST00000396610 SYMPKQ92797 1274 aaKnown RBP9.07□□□□□ -0.96
CMC1-202ENST00000396610 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.07□□□□□ -0.96
CMC1-202ENST00000396610 ATP1B4Q9UN42 357 aaPredicted RBP9.07□□□□□ -0.96
CMC1-202ENST00000396610 Q3C1V9 767 aa9.06□□□□□ -0.96
CMC1-202ENST00000396610 FBXO31Q5XUX0 539 aaPredicted RBP9.06□□□□□ -0.96
CMC1-202ENST00000396610 THAP11Q96EK4 314 aa9.06□□□□□ -0.96
CMC1-202ENST00000396610 C6orf229H3BNL8 230 aa9.05□□□□□ -0.96
CMC1-202ENST00000396610 TUSC1Q2TAM9 212 aa9.05□□□□□ -0.96
CMC1-202ENST00000396610 FMNL1O95466 1100 aaPredicted RBP9.04□□□□□ -0.96
CMC1-202ENST00000396610 HRCP23327 699 aa9.04□□□□□ -0.96
CMC1-202ENST00000396610 MTMR2Q13614 643 aa9.04□□□□□ -0.96
CMC1-202ENST00000396610 BRICD5Q6PL45 260 aa9.04□□□□□ -0.96
CMC1-202ENST00000396610 NKX2-3Q8TAU0 364 aa9.04□□□□□ -0.96
CMC1-202ENST00000396610 ZBTB3Q9H5J0 574 aa9.04□□□□□ -0.96
CMC1-202ENST00000396610 LILRB3O75022 631 aa9.03□□□□□ -0.96
CMC1-202ENST00000396610 ADH1BP00325 375 aa9.03□□□□□ -0.96
CMC1-202ENST00000396610 LAPTM4AQ15012 233 aa9.03□□□□□ -0.96
CMC1-202ENST00000396610 PRPF38BQ5VTL8 546 aaKnown RBP9.03□□□□□ -0.96
CMC1-202ENST00000396610 SALL2Q9Y467 1007 aaPredicted RBP9.03□□□□□ -0.96
CMC1-202ENST00000396610 SPSB2Q99619 263 aa9.02□□□□□ -0.97
CMC1-202ENST00000396610 PRDM9Q9NQV7 894 aa9.02□□□□□ -0.97
CMC1-202ENST00000396610 NUTM2BA6NNL0 878 aaPredicted RBP9.01□□□□□ -0.97
CMC1-202ENST00000396610 NUTM2EB1AL46 878 aaPredicted RBP9.01□□□□□ -0.97
CMC1-202ENST00000396610 RTL5Q5HYW3 569 aaPredicted RBP9.01□□□□□ -0.97
CMC1-202ENST00000396610 NUTM2DQ5VT03 806 aaPredicted RBP9.01□□□□□ -0.97
CMC1-202ENST00000396610 Q6ZNB5 142 aa9.01□□□□□ -0.97
CMC1-202ENST00000396610 RETREG3Q86VR2 466 aa9.01□□□□□ -0.97
CMC1-202ENST00000396610 NUTM2AQ8IVF1 878 aaPredicted RBP9.01□□□□□ -0.97
CMC1-202ENST00000396610 USB1Q9BQ65 265 aaKnown RBP9.01□□□□□ -0.97
CMC1-202ENST00000396610 CFAP99D6REC4 459 aa9□□□□□ -0.97
CMC1-202ENST00000396610 FAM160A2Q8N612 972 aaPredicted RBP8.99□□□□□ -0.97
CMC1-202ENST00000396610 PRR7Q8TB68 274 aa8.99□□□□□ -0.97
CMC1-202ENST00000396610 SPDYE5A6NIY4 337 aa8.98□□□□□ -0.97
CMC1-202ENST00000396610 RFC5P40937 340 aa8.98□□□□□ -0.97
CMC1-202ENST00000396610 MSS51Q4VC12 460 aa8.98□□□□□ -0.97
CMC1-202ENST00000396610 PPP2R2DQ66LE6 453 aa8.98□□□□□ -0.97
CMC1-202ENST00000396610 S1PR4O95977 384 aa8.97□□□□□ -0.97
CMC1-202ENST00000396610 TSC1Q92574 1164 aa8.96□□□□□ -0.98
CMC1-202ENST00000396610 SLC6A16Q9GZN6 736 aa8.96□□□□□ -0.98
CMC1-202ENST00000396610 JUNDP17535 347 aa8.95□□□□□ -0.98
CMC1-202ENST00000396610 DXOO77932 396 aaKnown RBP8.94□□□□□ -0.98
CMC1-202ENST00000396610 AP1G2O75843 785 aa8.93□□□□□ -0.98
CMC1-202ENST00000396610 HELBQ8NG08 1087 aaPredicted RBP8.93□□□□□ -0.98
CMC1-202ENST00000396610 GFRA3O60609 400 aa8.92□□□□□ -0.98
CMC1-202ENST00000396610 MMP16P51512 607 aa8.92□□□□□ -0.98
CMC1-202ENST00000396610 PRKD2Q9BZL6 878 aa8.92□□□□□ -0.98
CMC1-202ENST00000396610 V9GY48 417 aaPredicted RBP8.92□□□□□ -0.98
CMC1-202ENST00000396610 PPEF1O14829 653 aaPredicted RBP8.91□□□□□ -0.98
CMC1-202ENST00000396610 USP17L8P0C7I0 530 aa8.91□□□□□ -0.98
CMC1-202ENST00000396610 DESI1Q6ICB0 168 aa8.91□□□□□ -0.98
CMC1-202ENST00000396610 PPP1R18Q6NYC8 613 aa8.91□□□□□ -0.98
CMC1-202ENST00000396610 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.91□□□□□ -0.98
CMC1-202ENST00000396610 RNF223E7ERA6 249 aa8.9□□□□□ -0.98
CMC1-202ENST00000396610 PER1O15534 1290 aaPredicted RBP8.9□□□□□ -0.98
CMC1-202ENST00000396610 GGCXP38435 758 aa8.9□□□□□ -0.98
CMC1-202ENST00000396610 CTDSPL2Q05D32 466 aa8.9□□□□□ -0.98
CMC1-202ENST00000396610 FCF1Q9Y324 198 aaKnown RBP8.9□□□□□ -0.98
CMC1-202ENST00000396610 TMEM259Q4ZIN3 620 aa8.89□□□□□ -0.99
CMC1-202ENST00000396610 NRG2O14511 850 aaPredicted RBP8.88□□□□□ -0.99
CMC1-202ENST00000396610 PTPRNQ16849 979 aa8.88□□□□□ -0.99
CMC1-202ENST00000396610 LYPD8Q6UX82 237 aa8.88□□□□□ -0.99
CMC1-202ENST00000396610 LRRN4Q8WUT4 740 aa8.88□□□□□ -0.99
CMC1-202ENST00000396610 NUDT12Q9BQG2 462 aa8.88□□□□□ -0.99
CMC1-202ENST00000396610 CCNYL3P0C7X3 344 aa8.87□□□□□ -0.99
CMC1-202ENST00000396610 TRAF7Q6Q0C0 670 aa8.87□□□□□ -0.99
CMC1-202ENST00000396610 HMX1Q9NP08 348 aaPredicted RBP8.87□□□□□ -0.99
CMC1-202ENST00000396610 PLA2G2CQ5R387 149 aa8.86□□□□□ -0.99
CMC1-202ENST00000396610 CCDC24Q8N4L8 307 aa8.86□□□□□ -0.99
CMC1-202ENST00000396610 MAP10Q9P2G4 905 aa8.86□□□□□ -0.99
CMC1-202ENST00000396610 F12P00748 615 aaPredicted RBP8.85□□□□□ -0.99
CMC1-202ENST00000396610 MCM6Q14566 821 aa8.85□□□□□ -0.99
CMC1-202ENST00000396610 ANKLE1Q8NAG6 615 aa8.85□□□□□ -0.99
CMC1-202ENST00000396610 SNRKQ9NRH2 765 aa8.85□□□□□ -0.99
CMC1-202ENST00000396610 MTMR14Q8NCE2 650 aa8.84□□□□□ -0.99
CMC1-202ENST00000396610 BANK1Q8NDB2 785 aa8.84□□□□□ -0.99
CMC1-202ENST00000396610 GTF3C3Q9Y5Q9 886 aa8.83□□□□□ -1
CMC1-202ENST00000396610 CTHP32929 405 aa8.82□□□□□ -1
CMC1-202ENST00000396610 KCNH2Q12809 1159 aa8.81□□□□□ -1
CMC1-202ENST00000396610 EPS8L1Q8TE68 723 aa8.81□□□□□ -1
CMC1-202ENST00000396610 EVA1BQ9NVM1 165 aa8.81□□□□□ -1
CMC1-202ENST00000396610 NR6A1Q15406 480 aa8.8□□□□□ -1
CMC1-202ENST00000396610 PTCRAQ6ISU1 281 aaPredicted RBP8.8□□□□□ -1
CMC1-202ENST00000396610 EMID1Q96A84 441 aaPredicted RBP8.8□□□□□ -1
CMC1-202ENST00000396610 GJD4Q96KN9 370 aaPredicted RBP8.8□□□□□ -1
CMC1-202ENST00000396610 TRIM34Q9BYJ4 488 aa8.8□□□□□ -1
CMC1-202ENST00000396610 UNC93B1Q9H1C4 597 aa8.8□□□□□ -1
CMC1-202ENST00000396610 PDZRN3Q9UPQ7 1066 aa8.79□□□□□ -1
CMC1-202ENST00000396610 FLIIQ13045 1269 aa8.78□□□□□ -1
CMC1-202ENST00000396610 SOCS7O14512 581 aa8.77□□□□□ -1.01
CMC1-202ENST00000396610 LCE2BO14633 110 aa8.77□□□□□ -1.01
CMC1-202ENST00000396610 LIAT1Q6ZQX7 453 aa8.77□□□□□ -1.01
CMC1-202ENST00000396610 TRIM32Q13049 653 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms