RNA–Protein interactions for RNA: ENST00000396364.7

FXN-202, Transcript of frataxin, humanhuman

TSL 5 BASIC

Gene FXN, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-202ENST00000396364 NALCNQ8IZF0 1738 aa30.02■■■□□ 2.4
FXN-202ENST00000396364 SLC24A1O60721 1099 aa30.02■■■□□ 2.4
FXN-202ENST00000396364 SAFB2Q14151 953 aaKnown RBP eCLIP30.02■■■□□ 2.4
FXN-202ENST00000396364 DCCP43146 1447 aa30.02■■■□□ 2.4
FXN-202ENST00000396364 USP47Q96K76 1375 aa30.02■■■□□ 2.4
FXN-202ENST00000396364 PLEKHH1Q9ULM0 1364 aa30.02■■■□□ 2.4
FXN-202ENST00000396364 QRICH2Q9H0J4 1663 aa30.01■■■□□ 2.4
FXN-202ENST00000396364 ATF3P18847 181 aa30■■■□□ 2.39
FXN-202ENST00000396364 CADPS2Q86UW7 1296 aa29.99■■■□□ 2.39
FXN-202ENST00000396364 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.99■■■□□ 2.39
FXN-202ENST00000396364 EIF4G2P78344 907 aaKnown RBP eCLIP29.98■■■□□ 2.39
FXN-202ENST00000396364 ADGRB2O60241 1585 aa29.97■■■□□ 2.39
FXN-202ENST00000396364 CDC42BPGQ6DT37 1551 aa29.97■■■□□ 2.39
FXN-202ENST00000396364 MINK1Q8N4C8 1332 aaPredicted RBP29.96■■■□□ 2.39
FXN-202ENST00000396364 TOM1O60784 492 aa29.95■■■□□ 2.39
FXN-202ENST00000396364 SBNO2Q9Y2G9 1366 aa29.94■■■□□ 2.38
FXN-202ENST00000396364 ST20-MTHFSA0A0A6YYL1 179 aa29.91■■■□□ 2.38
FXN-202ENST00000396364 HIRIP3Q9BW71 556 aaPredicted RBP29.89■■■□□ 2.38
FXN-202ENST00000396364 EVC2Q86UK5 1308 aa29.89■■■□□ 2.38
FXN-202ENST00000396364 WASLO00401 505 aaPredicted RBP29.87■■■□□ 2.37
FXN-202ENST00000396364 FMN2Q9NZ56 1722 aa29.86■■■□□ 2.37
FXN-202ENST00000396364 UBAP1LF5GYI3 381 aa29.86■■■□□ 2.37
FXN-202ENST00000396364 HSPA5P11021 654 aaKnown RBP29.83■■■□□ 2.37
FXN-202ENST00000396364 SLAIN2Q9P270 581 aa29.83■■■□□ 2.37
FXN-202ENST00000396364 SRPK2P78362 688 aaKnown RBP29.82■■■□□ 2.36
FXN-202ENST00000396364 TMF1P82094 1093 aa29.82■■■□□ 2.36
FXN-202ENST00000396364 ANKARQ7Z5J8 1434 aa29.81■■■□□ 2.36
FXN-202ENST00000396364 CDCA8Q53HL2 280 aa29.81■■■□□ 2.36
FXN-202ENST00000396364 CDK19Q9BWU1 502 aa29.81■■■□□ 2.36
FXN-202ENST00000396364 TULP4Q9NRJ4 1543 aa29.81■■■□□ 2.36
FXN-202ENST00000396364 MST1RQ04912 1400 aa29.8■■■□□ 2.36
FXN-202ENST00000396364 TESK2Q96S53 571 aa29.79■■■□□ 2.36
FXN-202ENST00000396364 ITSN1Q15811 1721 aa29.77■■■□□ 2.36
FXN-202ENST00000396364 C1orf167Q5SNV9 1468 aa29.76■■■□□ 2.35
FXN-202ENST00000396364 SCAF1Q9H7N4 1312 aaKnown RBP29.75■■■□□ 2.35
FXN-202ENST00000396364 PUS7Q96PZ0 661 aaKnown RBP29.75■■■□□ 2.35
FXN-202ENST00000396364 NUTM2FA1L443 756 aa29.74■■■□□ 2.35
FXN-202ENST00000396364 ATAD2Q6PL18 1390 aa29.74■■■□□ 2.35
FXN-202ENST00000396364 PIP4K2BP78356 416 aa29.72■■■□□ 2.35
FXN-202ENST00000396364 ESCO1Q5FWF5 840 aa29.71■■■□□ 2.35
FXN-202ENST00000396364 NUDT16Q96DE0 195 aaKnown RBP29.71■■■□□ 2.35
FXN-202ENST00000396364 CABP2Q9NPB3 220 aa29.71■■■□□ 2.35
FXN-202ENST00000396364 KIF1AQ12756 1690 aa29.7■■■□□ 2.35
FXN-202ENST00000396364 ATP7BP35670 1465 aa29.7■■■□□ 2.35
FXN-202ENST00000396364 CCDC61Q9Y6R9 512 aa29.7■■■□□ 2.35
FXN-202ENST00000396364 RGPD8O14715 1765 aaPredicted RBP29.69■■■□□ 2.34
FXN-202ENST00000396364 USP32Q8NFA0 1604 aa29.69■■■□□ 2.34
FXN-202ENST00000396364 ROBO1Q9Y6N7 1651 aa29.69■■■□□ 2.34
FXN-202ENST00000396364 FBXO41Q8TF61 875 aa29.66■■■□□ 2.34
FXN-202ENST00000396364 DISP3Q9P2K9 1392 aa29.65■■■□□ 2.34
FXN-202ENST00000396364 BRINP3Q76B58 766 aa29.65■■■□□ 2.34
FXN-202ENST00000396364 PHF8Q9UPP1 1060 aa29.65■■■□□ 2.34
FXN-202ENST00000396364 TOPAZ1Q8N9V7 1692 aa29.65■■■□□ 2.34
FXN-202ENST00000396364 PRR36Q9H6K5 1346 aa29.65■■■□□ 2.34
FXN-202ENST00000396364 ORAI2Q96SN7 254 aa29.64■■■□□ 2.34
FXN-202ENST00000396364 NINLQ9Y2I6 1382 aa29.64■■■□□ 2.33
FXN-202ENST00000396364 PPIP5K1Q6PFW1 1433 aa29.62■■■□□ 2.33
FXN-202ENST00000396364 NPHP3Q7Z494 1330 aa29.6■■■□□ 2.33
FXN-202ENST00000396364 NGDNQ8NEJ9 315 aaKnown RBP29.59■■■□□ 2.33
FXN-202ENST00000396364 PLEKHG3A1L390 1219 aa29.58■■■□□ 2.33
FXN-202ENST00000396364 TMC1Q8TDI8 760 aa29.58■■■□□ 2.33
FXN-202ENST00000396364 PMFBP1Q8TBY8 1022 aa29.57■■■□□ 2.32
FXN-202ENST00000396364 POLR3GLQ9BT43 218 aa29.57■■■□□ 2.32
FXN-202ENST00000396364 NHSL1Q5SYE7 1610 aa29.56■■■□□ 2.32
FXN-202ENST00000396364 CABP1Q9NZU7 370 aa29.56■■■□□ 2.32
FXN-202ENST00000396364 AHDC1Q5TGY3 1603 aaPredicted RBP29.56■■■□□ 2.32
FXN-202ENST00000396364 PSME1Q06323 249 aa29.54■■■□□ 2.32
FXN-202ENST00000396364 FOXO3O43524 673 aa29.53■■■□□ 2.32
FXN-202ENST00000396364 TERF2IPQ9NYB0 399 aa29.53■■■□□ 2.32
FXN-202ENST00000396364 POLR3AO14802 1390 aaPredicted RBP29.52■■■□□ 2.32
FXN-202ENST00000396364 PHLPP1O60346 1717 aa29.52■■■□□ 2.32
FXN-202ENST00000396364 HDGFL2Q7Z4V5 671 aaPredicted RBP29.52■■■□□ 2.32
FXN-202ENST00000396364 ZNF692Q9BU19 519 aaPredicted RBP29.52■■■□□ 2.32
FXN-202ENST00000396364 ACEP12821 1306 aa29.51■■■□□ 2.32
FXN-202ENST00000396364 KIF7Q2M1P5 1343 aa29.48■■■□□ 2.31
FXN-202ENST00000396364 BRD4O60885 1362 aaPredicted RBP29.48■■■□□ 2.31
FXN-202ENST00000396364 KRT28Q7Z3Y7 464 aa29.47■■■□□ 2.31
FXN-202ENST00000396364 SLC12A5Q9H2X9 1139 aa29.47■■■□□ 2.31
FXN-202ENST00000396364 AKAP12Q02952 1782 aa29.47■■■□□ 2.31
FXN-202ENST00000396364 CCDC7Q96M83 1385 aa29.46■■■□□ 2.31
FXN-202ENST00000396364 SOS2Q07890 1332 aaPredicted RBP29.45■■■□□ 2.31
FXN-202ENST00000396364 C11orf95C9JLR9 678 aaPredicted RBP29.45■■■□□ 2.31
FXN-202ENST00000396364 MYOM1P52179 1685 aa29.44■■■□□ 2.3
FXN-202ENST00000396364 ANKRD36BQ8N2N9 1353 aa29.44■■■□□ 2.3
FXN-202ENST00000396364 LRRC59Q96AG4 307 aaKnown RBP29.44■■■□□ 2.3
FXN-202ENST00000396364 PXDNQ92626 1479 aa29.43■■■□□ 2.3
FXN-202ENST00000396364 KTN1Q86UP2 1357 aaKnown RBP29.43■■■□□ 2.3
FXN-202ENST00000396364 CPSF1Q10570 1443 aaKnown RBP29.43■■■□□ 2.3
FXN-202ENST00000396364 DDX17Q92841 729 aaKnown RBP29.42■■■□□ 2.3
FXN-202ENST00000396364 COL16A1Q07092 1604 aaPredicted RBP29.42■■■□□ 2.3
FXN-202ENST00000396364 SBNO1A3KN83 1393 aa29.41■■■□□ 2.3
FXN-202ENST00000396364 USP6P35125 1406 aa29.41■■■□□ 2.3
FXN-202ENST00000396364 WASHC2AQ641Q2 1341 aa29.41■■■□□ 2.3
FXN-202ENST00000396364 MON2Q7Z3U7 1717 aa29.4■■■□□ 2.3
FXN-202ENST00000396364 HSPA1LP34931 641 aa29.4■■■□□ 2.3
FXN-202ENST00000396364 A0A1W2PP64 1363 aa29.39■■■□□ 2.3
FXN-202ENST00000396364 XPCQ01831 940 aaPredicted RBP29.39■■■□□ 2.3
FXN-202ENST00000396364 PAK3O75914 559 aaPredicted RBP29.38■■■□□ 2.29
FXN-202ENST00000396364 CD163L1Q9NR16 1453 aa29.37■■■□□ 2.29
FXN-202ENST00000396364 TRPM3Q9HCF6 1732 aaPredicted RBP29.36■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms