RNA–Protein interactions for RNA: ENST00000396027.8

XRCC4-203, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene XRCC4, Length 1,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-203ENST00000396027 BMP1P13497 986 aa5.84□□□□□ -1.47
XRCC4-203ENST00000396027 TRIM32Q13049 653 aa5.84□□□□□ -1.47
XRCC4-203ENST00000396027 CAPN5O15484 640 aaPredicted RBP5.84□□□□□ -1.48
XRCC4-203ENST00000396027 IRS1P35568 1242 aa5.84□□□□□ -1.48
XRCC4-203ENST00000396027 Q8N3U1 123 aa5.84□□□□□ -1.48
XRCC4-203ENST00000396027 GRXCR2A6NFK2 248 aa5.83□□□□□ -1.48
XRCC4-203ENST00000396027 MSTNO14793 375 aa5.83□□□□□ -1.48
XRCC4-203ENST00000396027 GTPBP6O43824 516 aaPredicted RBP5.82□□□□□ -1.48
XRCC4-203ENST00000396027 RBM46Q8TBY0 533 aaKnown RBP5.82□□□□□ -1.48
XRCC4-203ENST00000396027 FMNL1O95466 1100 aaPredicted RBP5.81□□□□□ -1.48
XRCC4-203ENST00000396027 RSPH4AQ5TD94 716 aa5.81□□□□□ -1.48
XRCC4-203ENST00000396027 OSBPP22059 807 aa5.8□□□□□ -1.48
XRCC4-203ENST00000396027 ZFP42Q96MM3 310 aa5.8□□□□□ -1.48
XRCC4-203ENST00000396027 NPDC1Q9NQX5 325 aaPredicted RBP5.8□□□□□ -1.48
XRCC4-203ENST00000396027 SLC10A3P09131 477 aa5.79□□□□□ -1.48
XRCC4-203ENST00000396027 PUS10Q3MIT2 529 aaKnown RBP5.79□□□□□ -1.48
XRCC4-203ENST00000396027 FAM160A2Q8N612 972 aaPredicted RBP5.79□□□□□ -1.48
XRCC4-203ENST00000396027 THAP11Q96EK4 314 aa5.79□□□□□ -1.48
XRCC4-203ENST00000396027 SCARF2Q96GP6 870 aaPredicted RBP5.79□□□□□ -1.48
XRCC4-203ENST00000396027 ALDH1A1P00352 501 aa5.79□□□□□ -1.48
XRCC4-203ENST00000396027 MARSP56192 900 aaKnown RBP5.79□□□□□ -1.48
XRCC4-203ENST00000396027 DAXXQ9UER7 740 aaPredicted RBP5.79□□□□□ -1.48
XRCC4-203ENST00000396027 WNT7BP56706 349 aa5.78□□□□□ -1.48
XRCC4-203ENST00000396027 RC3H1Q5TC82 1133 aaKnown RBP5.78□□□□□ -1.48
XRCC4-203ENST00000396027 KRTAP4-12Q9BQ66 201 aa5.78□□□□□ -1.48
XRCC4-203ENST00000396027 SALL2Q9Y467 1007 aaPredicted RBP5.78□□□□□ -1.48
XRCC4-203ENST00000396027 SCARF1Q14162 830 aa5.77□□□□□ -1.49
XRCC4-203ENST00000396027 MSS51Q4VC12 460 aa5.77□□□□□ -1.49
XRCC4-203ENST00000396027 CADPS2Q86UW7 1296 aa5.77□□□□□ -1.49
XRCC4-203ENST00000396027 K7ELQ4 463 aaPredicted RBP5.76□□□□□ -1.49
XRCC4-203ENST00000396027 SVOPQ8N4V2 548 aa5.76□□□□□ -1.49
XRCC4-203ENST00000396027 SPOCK3Q9BQ16 436 aa5.76□□□□□ -1.49
XRCC4-203ENST00000396027 KRTAP4-8A0A0G2JLE6 195 aa5.75□□□□□ -1.49
XRCC4-203ENST00000396027 MORN1Q5T089 497 aa5.75□□□□□ -1.49
XRCC4-203ENST00000396027 KRTAP9-9Q9BYP9 154 aa5.75□□□□□ -1.49
XRCC4-203ENST00000396027 KRTAP9-4Q9BYQ2 154 aa5.75□□□□□ -1.49
XRCC4-203ENST00000396027 WASF2Q9Y6W5 498 aa5.75□□□□□ -1.49
XRCC4-203ENST00000396027 RCCD1A6NED2 376 aa5.74□□□□□ -1.49
XRCC4-203ENST00000396027 ZNF385CQ66K41 422 aaPredicted RBP5.74□□□□□ -1.49
XRCC4-203ENST00000396027 PRDM9Q9NQV7 894 aa5.74□□□□□ -1.49
XRCC4-203ENST00000396027 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.73□□□□□ -1.49
XRCC4-203ENST00000396027 PPFIA3O75145 1194 aa5.73□□□□□ -1.49
XRCC4-203ENST00000396027 PLA2G4EQ3MJ16 856 aa5.73□□□□□ -1.49
XRCC4-203ENST00000396027 GALNT6Q8NCL4 622 aa5.73□□□□□ -1.49
XRCC4-203ENST00000396027 CNTNAP3BQ96NU0 1288 aa5.73□□□□□ -1.49
XRCC4-203ENST00000396027 CNTNAP3Q9BZ76 1288 aa5.73□□□□□ -1.49
XRCC4-203ENST00000396027 MRPL14Q6P1L8 145 aaKnown RBP5.72□□□□□ -1.49
XRCC4-203ENST00000396027 ARHGEF15O94989 841 aa5.71□□□□□ -1.5
XRCC4-203ENST00000396027 FECHP22830 423 aa5.71□□□□□ -1.5
XRCC4-203ENST00000396027 KRT76Q01546 638 aa5.71□□□□□ -1.5
XRCC4-203ENST00000396027 BRICD5Q6PL45 260 aa5.71□□□□□ -1.5
XRCC4-203ENST00000396027 ARIH1Q9Y4X5 557 aaPredicted RBP5.71□□□□□ -1.5
XRCC4-203ENST00000396027 ADGRG1Q9Y653 693 aa5.71□□□□□ -1.5
XRCC4-203ENST00000396027 ATP6V1AP38606 617 aa5.7□□□□□ -1.5
XRCC4-203ENST00000396027 HRCP23327 699 aa5.69□□□□□ -1.5
XRCC4-203ENST00000396027 MMP16P51512 607 aa5.69□□□□□ -1.5
XRCC4-203ENST00000396027 SKOR1P84550 965 aa5.69□□□□□ -1.5
XRCC4-203ENST00000396027 PROCP04070 461 aa5.69□□□□□ -1.5
XRCC4-203ENST00000396027 SLC27A5Q9Y2P5 690 aa5.69□□□□□ -1.5
XRCC4-203ENST00000396027 SOBPA7XYQ1 873 aa5.68□□□□□ -1.5
XRCC4-203ENST00000396027 MAN1A2O60476 641 aa5.68□□□□□ -1.5
XRCC4-203ENST00000396027 SLURP2P0DP57 97 aa5.68□□□□□ -1.5
XRCC4-203ENST00000396027 PURBQ96QR8 312 aaKnown RBP5.68□□□□□ -1.5
XRCC4-203ENST00000396027 SIAH2O43255 324 aa5.67□□□□□ -1.5
XRCC4-203ENST00000396027 PHF20L1A8MW92 1017 aa5.66□□□□□ -1.5
XRCC4-203ENST00000396027 DCAF5Q96JK2 942 aa5.66□□□□□ -1.5
XRCC4-203ENST00000396027 FUT2Q10981 343 aa5.65□□□□□ -1.5
XRCC4-203ENST00000396027 EHBP1Q8NDI1 1231 aa5.65□□□□□ -1.5
XRCC4-203ENST00000396027 COL25A1Q9BXS0 654 aaPredicted RBP5.65□□□□□ -1.5
XRCC4-203ENST00000396027 CENPBP07199 599 aaPredicted RBP5.64□□□□□ -1.51
XRCC4-203ENST00000396027 GPR161Q8N6U8 529 aaKnown RBP5.64□□□□□ -1.51
XRCC4-203ENST00000396027 Q3C1V9 767 aa5.64□□□□□ -1.51
XRCC4-203ENST00000396027 DXOO77932 396 aaKnown RBP5.63□□□□□ -1.51
XRCC4-203ENST00000396027 ITGB2P05107 769 aa5.63□□□□□ -1.51
XRCC4-203ENST00000396027 PRKCSHP14314 528 aaPredicted RBP5.63□□□□□ -1.51
XRCC4-203ENST00000396027 WHAMMQ8TF30 809 aa5.63□□□□□ -1.51
XRCC4-203ENST00000396027 NANOS1Q8WY41 292 aaKnown RBP5.63□□□□□ -1.51
XRCC4-203ENST00000396027 MAP3K10Q02779 954 aa5.62□□□□□ -1.51
XRCC4-203ENST00000396027 PTGDRQ13258 359 aa5.62□□□□□ -1.51
XRCC4-203ENST00000396027 GRIPAP1Q4V328 841 aa5.62□□□□□ -1.51
XRCC4-203ENST00000396027 AMER1Q5JTC6 1135 aaPredicted RBP5.62□□□□□ -1.51
XRCC4-203ENST00000396027 DCAF8L2P0C7V8 631 aa5.61□□□□□ -1.51
XRCC4-203ENST00000396027 RNF19BQ6ZMZ0 732 aa5.61□□□□□ -1.51
XRCC4-203ENST00000396027 CCDC24Q8N4L8 307 aa5.61□□□□□ -1.51
XRCC4-203ENST00000396027 RDH13Q8NBN7 331 aa5.61□□□□□ -1.51
XRCC4-203ENST00000396027 ENAMQ9NRM1 1142 aa5.61□□□□□ -1.51
XRCC4-203ENST00000396027 PLEKHG3A1L390 1219 aa5.6□□□□□ -1.51
XRCC4-203ENST00000396027 OATP04181 439 aa5.6□□□□□ -1.51
XRCC4-203ENST00000396027 BAG6P46379 1132 aa5.6□□□□□ -1.51
XRCC4-203ENST00000396027 E2F4Q16254 413 aa5.6□□□□□ -1.51
XRCC4-203ENST00000396027 ADH1CP00326 375 aa5.59□□□□□ -1.51
XRCC4-203ENST00000396027 KRTAP4-7Q9BYR0 210 aa5.58□□□□□ -1.52
XRCC4-203ENST00000396027 TIMP2P16035 220 aa5.58□□□□□ -1.52
XRCC4-203ENST00000396027 NNTQ13423 1086 aa5.58□□□□□ -1.52
XRCC4-203ENST00000396027 RNFT1Q5M7Z0 435 aa5.58□□□□□ -1.52
XRCC4-203ENST00000396027 PODNQ7Z5L7 613 aa5.58□□□□□ -1.52
XRCC4-203ENST00000396027 MPNDQ8N594 471 aa5.58□□□□□ -1.52
XRCC4-203ENST00000396027 BEND7Q8N7W2 519 aaPredicted RBP5.58□□□□□ -1.52
XRCC4-203ENST00000396027 PXYLP1Q8TE99 480 aa5.58□□□□□ -1.52
XRCC4-203ENST00000396027 WDR4P57081 412 aaKnown RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms