RNA–Protein interactions for RNA: ENST00000394945.5

SPOCK1-202, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPOCK1, Length 4,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-202ENST00000394945 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.78■□□□□ 0.6
SPOCK1-202ENST00000394945 CWC22Q9HCG8 908 aaKnown RBP18.78■□□□□ 0.6
SPOCK1-202ENST00000394945 WDR97A6NE52 1622 aa18.77■□□□□ 0.59
SPOCK1-202ENST00000394945 PATL2C9JE40 543 aaKnown RBP18.77■□□□□ 0.59
SPOCK1-202ENST00000394945 IPO7O95373 1038 aaKnown RBP18.77■□□□□ 0.59
SPOCK1-202ENST00000394945 CC2D2AQ9P2K1 1620 aa18.76■□□□□ 0.59
SPOCK1-202ENST00000394945 MCM2P49736 904 aa18.76■□□□□ 0.59
SPOCK1-202ENST00000394945 ZHX1Q9UKY1 873 aaPredicted RBP18.76■□□□□ 0.59
SPOCK1-202ENST00000394945 FIBPO43427 364 aa18.76■□□□□ 0.59
SPOCK1-202ENST00000394945 CCDC27Q2M243 656 aa18.76■□□□□ 0.59
SPOCK1-202ENST00000394945 CLCN1P35523 988 aa18.76■□□□□ 0.59
SPOCK1-202ENST00000394945 RSPH4AQ5TD94 716 aa18.76■□□□□ 0.59
SPOCK1-202ENST00000394945 XPCQ01831 940 aaPredicted RBP18.75■□□□□ 0.59
SPOCK1-202ENST00000394945 TCP11L2Q8N4U5 519 aa18.75■□□□□ 0.59
SPOCK1-202ENST00000394945 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.75■□□□□ 0.59
SPOCK1-202ENST00000394945 H0YHG0 523 aa18.75■□□□□ 0.59
SPOCK1-202ENST00000394945 MIA2Q96PC5 1412 aa18.74■□□□□ 0.59
SPOCK1-202ENST00000394945 LEKR1Q6ZMV7 388 aa18.74■□□□□ 0.59
SPOCK1-202ENST00000394945 PPP2R1AP30153 589 aa18.74■□□□□ 0.59
SPOCK1-202ENST00000394945 NBPF8Q3BBV2 869 aa18.74■□□□□ 0.59
SPOCK1-202ENST00000394945 ROCK1Q13464 1354 aa18.74■□□□□ 0.59
SPOCK1-202ENST00000394945 SYNJ1O43426 1573 aa18.73■□□□□ 0.59
SPOCK1-202ENST00000394945 RNF20Q5VTR2 975 aa18.73■□□□□ 0.59
SPOCK1-202ENST00000394945 SDF4Q9BRK5 362 aa18.73■□□□□ 0.59
SPOCK1-202ENST00000394945 NAT10Q9H0A0 1025 aaKnown RBP18.73■□□□□ 0.59
SPOCK1-202ENST00000394945 DIAPH1O60610 1272 aaKnown RBP18.72■□□□□ 0.59
SPOCK1-202ENST00000394945 CLSTN1O94985 981 aa18.72■□□□□ 0.59
SPOCK1-202ENST00000394945 WASHC2CQ9Y4E1 1318 aa18.72■□□□□ 0.59
SPOCK1-202ENST00000394945 ERICH4A6NGS2 130 aa18.72■□□□□ 0.59
SPOCK1-202ENST00000394945 ZNF644Q9H582 1327 aaPredicted RBP18.71■□□□□ 0.59
SPOCK1-202ENST00000394945 PDE4CQ08493 712 aa18.71■□□□□ 0.59
SPOCK1-202ENST00000394945 AK7Q96M32 723 aa18.71■□□□□ 0.59
SPOCK1-202ENST00000394945 RUFY1Q96T51 708 aa18.71■□□□□ 0.59
SPOCK1-202ENST00000394945 TOMM22Q9NS69 142 aa18.71■□□□□ 0.59
SPOCK1-202ENST00000394945 BICRAQ9NZM4 1560 aa18.7■□□□□ 0.58
SPOCK1-202ENST00000394945 CCDC192P0DO97 292 aa18.7■□□□□ 0.58
SPOCK1-202ENST00000394945 CPLX2Q6PUV4 134 aaKnown RBP18.7■□□□□ 0.58
SPOCK1-202ENST00000394945 TBC1D2Q9BYX2 928 aa18.7■□□□□ 0.58
SPOCK1-202ENST00000394945 LRRC9Q6ZRR7 1453 aa18.69■□□□□ 0.58
SPOCK1-202ENST00000394945 NUTM2DQ5VT03 806 aaPredicted RBP18.69■□□□□ 0.58
SPOCK1-202ENST00000394945 SYCE3A1L190 88 aa18.69■□□□□ 0.58
SPOCK1-202ENST00000394945 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.69■□□□□ 0.58
SPOCK1-202ENST00000394945 GCC1Q96CN9 775 aa18.69■□□□□ 0.58
SPOCK1-202ENST00000394945 HDGFP51858 240 aaKnown RBP18.69■□□□□ 0.58
SPOCK1-202ENST00000394945 CGNQ9P2M7 1197 aaKnown RBP18.68■□□□□ 0.58
SPOCK1-202ENST00000394945 CPLX1O14810 134 aa18.68■□□□□ 0.58
SPOCK1-202ENST00000394945 ANKRD20A12PQ8NF67 263 aa18.68■□□□□ 0.58
SPOCK1-202ENST00000394945 GNAI1P63096 354 aa18.68■□□□□ 0.58
SPOCK1-202ENST00000394945 RDXP35241 583 aaKnown RBP18.67■□□□□ 0.58
SPOCK1-202ENST00000394945 EXOSC9Q06265 439 aaKnown RBP18.67■□□□□ 0.58
SPOCK1-202ENST00000394945 C20orf194Q5TEA3 1177 aa18.67■□□□□ 0.58
SPOCK1-202ENST00000394945 IFIT2P09913 472 aaKnown RBP18.67■□□□□ 0.58
SPOCK1-202ENST00000394945 ERCC4Q92889 916 aaPredicted RBP18.67■□□□□ 0.58
SPOCK1-202ENST00000394945 CCDC9Q9Y3X0 531 aaKnown RBP18.67■□□□□ 0.58
SPOCK1-202ENST00000394945 MYOM3Q5VTT5 1437 aa18.66■□□□□ 0.58
SPOCK1-202ENST00000394945 XRCC6P12956 609 aaKnown RBP eCLIP18.66■□□□□ 0.58
SPOCK1-202ENST00000394945 PDILTQ8N807 584 aa18.66■□□□□ 0.58
SPOCK1-202ENST00000394945 WDR33Q9C0J8 1336 aaKnown RBP18.66■□□□□ 0.58
SPOCK1-202ENST00000394945 HOOK1Q9UJC3 728 aaKnown RBP18.66■□□□□ 0.58
SPOCK1-202ENST00000394945 NINLQ9Y2I6 1382 aa18.66■□□□□ 0.58
SPOCK1-202ENST00000394945 EVC2Q86UK5 1308 aa18.66■□□□□ 0.58
SPOCK1-202ENST00000394945 FOSBP53539 338 aa18.66■□□□□ 0.58
SPOCK1-202ENST00000394945 TAF7LQ5H9L4 462 aa18.66■□□□□ 0.58
SPOCK1-202ENST00000394945 FMNL2Q96PY5 1086 aa18.66■□□□□ 0.58
SPOCK1-202ENST00000394945 CALRP27797 417 aaKnown RBP18.66■□□□□ 0.58
SPOCK1-202ENST00000394945 SMC2O95347 1197 aa18.65■□□□□ 0.58
SPOCK1-202ENST00000394945 KINO60870 393 aaKnown RBP18.65■□□□□ 0.58
SPOCK1-202ENST00000394945 ZNF330Q9Y3S2 320 aaPredicted RBP18.65■□□□□ 0.58
SPOCK1-202ENST00000394945 PDCP20941 246 aa18.65■□□□□ 0.58
SPOCK1-202ENST00000394945 FKBP5Q13451 457 aaPredicted RBP18.64■□□□□ 0.57
SPOCK1-202ENST00000394945 C1orf115Q9H7X2 142 aa18.64■□□□□ 0.57
SPOCK1-202ENST00000394945 MVPQ14764 893 aaKnown RBP18.64■□□□□ 0.57
SPOCK1-202ENST00000394945 CCP110O43303 1012 aa18.64■□□□□ 0.57
SPOCK1-202ENST00000394945 SYNE3Q6ZMZ3 975 aa18.64■□□□□ 0.57
SPOCK1-202ENST00000394945 HMGXB3Q12766 1538 aa18.64■□□□□ 0.57
SPOCK1-202ENST00000394945 DYNC1I1O14576 645 aa18.63■□□□□ 0.57
SPOCK1-202ENST00000394945 TRIM29Q14134 588 aa18.63■□□□□ 0.57
SPOCK1-202ENST00000394945 SKIDA1Q1XH10 827 aa18.63■□□□□ 0.57
SPOCK1-202ENST00000394945 PCMTD1Q96MG8 357 aaPredicted RBP18.63■□□□□ 0.57
SPOCK1-202ENST00000394945 AMPHP49418 695 aa18.63■□□□□ 0.57
SPOCK1-202ENST00000394945 MTHFSP49914 203 aa18.63■□□□□ 0.57
SPOCK1-202ENST00000394945 TNPO1Q92973 898 aaKnown RBP18.63■□□□□ 0.57
SPOCK1-202ENST00000394945 CEP89Q96ST8 783 aa18.63■□□□□ 0.57
SPOCK1-202ENST00000394945 PANK2Q9BZ23 570 aa18.62■□□□□ 0.57
SPOCK1-202ENST00000394945 CHD1LQ86WJ1 897 aa18.62■□□□□ 0.57
SPOCK1-202ENST00000394945 GRIN2BQ13224 1484 aa18.61■□□□□ 0.57
SPOCK1-202ENST00000394945 CUX1P39880 1505 aa18.61■□□□□ 0.57
SPOCK1-202ENST00000394945 TOPBP1Q92547 1522 aa18.61■□□□□ 0.57
SPOCK1-202ENST00000394945 C9orf78Q9NZ63 289 aaPredicted RBP18.61■□□□□ 0.57
SPOCK1-202ENST00000394945 TNMDQ9H2S6 317 aa18.61■□□□□ 0.57
SPOCK1-202ENST00000394945 NOB1Q9ULX3 412 aaKnown RBP18.61■□□□□ 0.57
SPOCK1-202ENST00000394945 POLA1P09884 1462 aaPredicted RBP18.61■□□□□ 0.57
SPOCK1-202ENST00000394945 ERC2O15083 957 aa18.61■□□□□ 0.57
SPOCK1-202ENST00000394945 AKAP17AQ02040 695 aaKnown RBP18.6■□□□□ 0.57
SPOCK1-202ENST00000394945 NECTIN2Q92692 538 aa18.6■□□□□ 0.57
SPOCK1-202ENST00000394945 TSPYL1Q9H0U9 437 aa18.6■□□□□ 0.57
SPOCK1-202ENST00000394945 CDR1P51861 262 aa18.6■□□□□ 0.57
SPOCK1-202ENST00000394945 OLFM4Q6UX06 510 aa18.6■□□□□ 0.57
SPOCK1-202ENST00000394945 ARAP1Q96P48 1450 aa18.6■□□□□ 0.57
SPOCK1-202ENST00000394945 DEF6Q9H4E7 631 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms