RNA–Protein interactions for RNA: ENST00000394729.6

PRKCD-202, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-202ENST00000394729 ALKQ9UM73 1620 aa27.23■■□□□ 1.95
PRKCD-202ENST00000394729 CDCA7LQ96GN5 454 aa27.23■■□□□ 1.95
PRKCD-202ENST00000394729 CABP1Q9NZU7 370 aa27.22■■□□□ 1.95
PRKCD-202ENST00000394729 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.22■■□□□ 1.95
PRKCD-202ENST00000394729 DNAJC5Q9H3Z4 198 aa27.21■■□□□ 1.95
PRKCD-202ENST00000394729 SLC24A1O60721 1099 aa27.21■■□□□ 1.95
PRKCD-202ENST00000394729 FBLN1P23142 703 aa27.21■■□□□ 1.95
PRKCD-202ENST00000394729 TULP4Q9NRJ4 1543 aa27.2■■□□□ 1.94
PRKCD-202ENST00000394729 ZFYVE9O95405 1425 aa27.19■■□□□ 1.94
PRKCD-202ENST00000394729 ARHGEF28Q8N1W1 1705 aaKnown RBP27.19■■□□□ 1.94
PRKCD-202ENST00000394729 SBNO2Q9Y2G9 1366 aa27.19■■□□□ 1.94
PRKCD-202ENST00000394729 PTPRMP28827 1452 aa27.18■■□□□ 1.94
PRKCD-202ENST00000394729 LRPPRCP42704 1394 aaKnown RBP27.17■■□□□ 1.94
PRKCD-202ENST00000394729 RBM33Q96EV2 1170 aaKnown RBP27.17■■□□□ 1.94
PRKCD-202ENST00000394729 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.16■■□□□ 1.94
PRKCD-202ENST00000394729 TMEM2Q9UHN6 1383 aa27.15■■□□□ 1.94
PRKCD-202ENST00000394729 NEUROD2Q15784 382 aa27.15■■□□□ 1.94
PRKCD-202ENST00000394729 PPM1GO15355 546 aaPredicted RBP27.13■■□□□ 1.93
PRKCD-202ENST00000394729 A0A1W2PP64 1363 aa27.13■■□□□ 1.93
PRKCD-202ENST00000394729 HDGFP51858 240 aaKnown RBP27.12■■□□□ 1.93
PRKCD-202ENST00000394729 CGNL1Q0VF96 1302 aa27.12■■□□□ 1.93
PRKCD-202ENST00000394729 EID1Q9Y6B2 187 aa27.12■■□□□ 1.93
PRKCD-202ENST00000394729 MYO3AQ8NEV4 1616 aa27.11■■□□□ 1.93
PRKCD-202ENST00000394729 MTHFSP49914 203 aa27.11■■□□□ 1.93
PRKCD-202ENST00000394729 NUDCQ9Y266 331 aa27.1■■□□□ 1.93
PRKCD-202ENST00000394729 RRP7AQ9Y3A4 280 aaKnown RBP27.07■■□□□ 1.92
PRKCD-202ENST00000394729 APAF1O14727 1248 aa27.06■■□□□ 1.92
PRKCD-202ENST00000394729 ANKRD36BQ8N2N9 1353 aa27.04■■□□□ 1.92
PRKCD-202ENST00000394729 TERF2IPQ9NYB0 399 aa27.04■■□□□ 1.92
PRKCD-202ENST00000394729 ZRANB1Q9UGI0 708 aa27.03■■□□□ 1.92
PRKCD-202ENST00000394729 SOX12O15370 315 aa27.03■■□□□ 1.92
PRKCD-202ENST00000394729 HDGFL2Q7Z4V5 671 aaPredicted RBP27.02■■□□□ 1.92
PRKCD-202ENST00000394729 ROBO2Q9HCK4 1378 aa27.02■■□□□ 1.92
PRKCD-202ENST00000394729 WASLO00401 505 aaPredicted RBP27.01■■□□□ 1.91
PRKCD-202ENST00000394729 FYB1O15117 783 aa27.01■■□□□ 1.91
PRKCD-202ENST00000394729 AMOTL2Q9Y2J4 779 aa27.01■■□□□ 1.91
PRKCD-202ENST00000394729 FER1L4A9Z1Z3 1794 aa27.01■■□□□ 1.91
PRKCD-202ENST00000394729 C3P01024 1663 aa27■■□□□ 1.91
PRKCD-202ENST00000394729 THEMISQ8N1K5 641 aaPredicted RBP27■■□□□ 1.91
PRKCD-202ENST00000394729 U2SURPO15042 1029 aaKnown RBP26.99■■□□□ 1.91
PRKCD-202ENST00000394729 B4GALNT3Q6L9W6 998 aa26.99■■□□□ 1.91
PRKCD-202ENST00000394729 NUDT16Q96DE0 195 aaKnown RBP26.99■■□□□ 1.91
PRKCD-202ENST00000394729 UBR1Q8IWV7 1749 aa26.98■■□□□ 1.91
PRKCD-202ENST00000394729 ATAD2Q6PL18 1390 aa26.98■■□□□ 1.91
PRKCD-202ENST00000394729 ABCC11Q96J66 1382 aa26.98■■□□□ 1.91
PRKCD-202ENST00000394729 NRXN3Q9Y4C0 1643 aa26.98■■□□□ 1.91
PRKCD-202ENST00000394729 PLIN1O60240 522 aa26.96■■□□□ 1.91
PRKCD-202ENST00000394729 PLEKHG5O94827 1062 aa26.96■■□□□ 1.91
PRKCD-202ENST00000394729 PMFBP1Q8TBY8 1022 aa26.96■■□□□ 1.91
PRKCD-202ENST00000394729 ADAMTS13Q76LX8 1427 aa26.95■■□□□ 1.9
PRKCD-202ENST00000394729 U2AF1L5P0DN76 240 aaPredicted RBP26.95■■□□□ 1.9
PRKCD-202ENST00000394729 U2AF1Q01081 240 aaKnown RBP eCLIP26.95■■□□□ 1.9
PRKCD-202ENST00000394729 NME9Q86XW9 330 aa26.95■■□□□ 1.9
PRKCD-202ENST00000394729 SMG6Q86US8 1419 aaKnown RBP26.95■■□□□ 1.9
PRKCD-202ENST00000394729 NPC1L1Q9UHC9 1359 aa26.94■■□□□ 1.9
PRKCD-202ENST00000394729 DMRT2Q9Y5R5 561 aa26.91■■□□□ 1.9
PRKCD-202ENST00000394729 PRR36Q9H6K5 1346 aa26.91■■□□□ 1.9
PRKCD-202ENST00000394729 PPIP5K1Q6PFW1 1433 aa26.91■■□□□ 1.9
PRKCD-202ENST00000394729 SPINK5Q9NQ38 1064 aaPredicted RBP26.9■■□□□ 1.9
PRKCD-202ENST00000394729 NLRP1Q9C000 1473 aa26.9■■□□□ 1.9
PRKCD-202ENST00000394729 KCNA6P17658 529 aa26.89■■□□□ 1.9
PRKCD-202ENST00000394729 RCAN3Q9UKA8 241 aa26.89■■□□□ 1.9
PRKCD-202ENST00000394729 RIMS1Q86UR5 1692 aaKnown RBP26.89■■□□□ 1.9
PRKCD-202ENST00000394729 CD163L1Q9NR16 1453 aa26.89■■□□□ 1.89
PRKCD-202ENST00000394729 BLMP54132 1417 aaPredicted RBP26.88■■□□□ 1.89
PRKCD-202ENST00000394729 PTPRUQ92729 1446 aa26.88■■□□□ 1.89
PRKCD-202ENST00000394729 CFAP53Q96M91 514 aa26.88■■□□□ 1.89
PRKCD-202ENST00000394729 CCDC61Q9Y6R9 512 aa26.88■■□□□ 1.89
PRKCD-202ENST00000394729 SETD1AO15047 1707 aaKnown RBP26.87■■□□□ 1.89
PRKCD-202ENST00000394729 PLEKHG1Q9ULL1 1385 aa26.87■■□□□ 1.89
PRKCD-202ENST00000394729 RRS1Q15050 365 aaKnown RBP26.86■■□□□ 1.89
PRKCD-202ENST00000394729 PUS7Q96PZ0 661 aaKnown RBP26.85■■□□□ 1.89
PRKCD-202ENST00000394729 EMILIN1Q9Y6C2 1016 aa26.84■■□□□ 1.89
PRKCD-202ENST00000394729 NUTM2GQ5VZR2 741 aa26.82■■□□□ 1.88
PRKCD-202ENST00000394729 TCP11L2Q8N4U5 519 aa26.81■■□□□ 1.88
PRKCD-202ENST00000394729 GOLGA2Q08379 1002 aa26.81■■□□□ 1.88
PRKCD-202ENST00000394729 C14orf37Q86TY3 774 aa26.79■■□□□ 1.88
PRKCD-202ENST00000394729 ANKLE2Q86XL3 938 aa26.79■■□□□ 1.88
PRKCD-202ENST00000394729 ACEP12821 1306 aa26.79■■□□□ 1.88
PRKCD-202ENST00000394729 POLR3AO14802 1390 aaPredicted RBP26.78■■□□□ 1.88
PRKCD-202ENST00000394729 HMOX1P09601 288 aa26.78■■□□□ 1.88
PRKCD-202ENST00000394729 TBX22Q9Y458 520 aa26.77■■□□□ 1.88
PRKCD-202ENST00000394729 NGDNQ8NEJ9 315 aaKnown RBP26.76■■□□□ 1.87
PRKCD-202ENST00000394729 NINLQ9Y2I6 1382 aa26.76■■□□□ 1.87
PRKCD-202ENST00000394729 RRP1P56182 461 aaKnown RBP26.75■■□□□ 1.87
PRKCD-202ENST00000394729 PDE3BQ13370 1112 aa26.75■■□□□ 1.87
PRKCD-202ENST00000394729 PELP1Q8IZL8 1130 aaKnown RBP26.75■■□□□ 1.87
PRKCD-202ENST00000394729 DLC1Q96QB1 1528 aa26.75■■□□□ 1.87
PRKCD-202ENST00000394729 DUSP27Q5VZP5 1158 aa26.74■■□□□ 1.87
PRKCD-202ENST00000394729 EXOC6Q8TAG9 804 aa26.74■■□□□ 1.87
PRKCD-202ENST00000394729 PPP4R2Q9NY27 417 aa26.74■■□□□ 1.87
PRKCD-202ENST00000394729 POLKQ9UBT6 870 aa26.74■■□□□ 1.87
PRKCD-202ENST00000394729 COG3Q96JB2 828 aa26.73■■□□□ 1.87
PRKCD-202ENST00000394729 PAK3O75914 559 aaPredicted RBP26.72■■□□□ 1.87
PRKCD-202ENST00000394729 RUNDC1Q96C34 613 aa26.72■■□□□ 1.87
PRKCD-202ENST00000394729 C20orf194Q5TEA3 1177 aa26.71■■□□□ 1.87
PRKCD-202ENST00000394729 WWC1Q8IX03 1113 aa26.71■■□□□ 1.87
PRKCD-202ENST00000394729 FAM135BQ49AJ0 1406 aa26.71■■□□□ 1.87
PRKCD-202ENST00000394729 DIAPH1O60610 1272 aaKnown RBP26.71■■□□□ 1.87
PRKCD-202ENST00000394729 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.7■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms