RNA–Protein interactions for RNA: ENST00000394320.7

PPARGC1B-203, Transcript of PPARG coactivator 1 beta, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1B, Length 4,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-203ENST00000394320 WWC1Q8IX03 1113 aa17.71■□□□□ 0.43
PPARGC1B-203ENST00000394320 CAMSAP2Q08AD1 1489 aa17.71■□□□□ 0.43
PPARGC1B-203ENST00000394320 URB2Q14146 1524 aaKnown RBP17.71■□□□□ 0.43
PPARGC1B-203ENST00000394320 NBPF8Q3BBV2 869 aa17.71■□□□□ 0.43
PPARGC1B-203ENST00000394320 NOL10Q9BSC4 688 aaKnown RBP17.7■□□□□ 0.42
PPARGC1B-203ENST00000394320 RTEL1-TNFRSF6BF6WH68 1400 aa17.7■□□□□ 0.42
PPARGC1B-203ENST00000394320 CT47B1P0C2W7 299 aaPredicted RBP17.7■□□□□ 0.42
PPARGC1B-203ENST00000394320 USP35Q9P2H5 1018 aa17.7■□□□□ 0.42
PPARGC1B-203ENST00000394320 AMOTL1Q8IY63 956 aa17.7■□□□□ 0.42
PPARGC1B-203ENST00000394320 CDK19Q9BWU1 502 aa17.7■□□□□ 0.42
PPARGC1B-203ENST00000394320 ERC2O15083 957 aa17.7■□□□□ 0.42
PPARGC1B-203ENST00000394320 RNF20Q5VTR2 975 aa17.69■□□□□ 0.42
PPARGC1B-203ENST00000394320 SYNE3Q6ZMZ3 975 aa17.69■□□□□ 0.42
PPARGC1B-203ENST00000394320 ESCO1Q5FWF5 840 aa17.69■□□□□ 0.42
PPARGC1B-203ENST00000394320 GNAI3P08754 354 aa17.69■□□□□ 0.42
PPARGC1B-203ENST00000394320 CCDC30Q5VVM6 783 aa17.69■□□□□ 0.42
PPARGC1B-203ENST00000394320 PLB1Q6P1J6 1458 aa17.68■□□□□ 0.42
PPARGC1B-203ENST00000394320 MEX3CQ5U5Q3 659 aaKnown RBP17.68■□□□□ 0.42
PPARGC1B-203ENST00000394320 PPP6R1Q9UPN7 881 aa17.68■□□□□ 0.42
PPARGC1B-203ENST00000394320 GOLGA6L3A6NEY3 463 aa17.68■□□□□ 0.42
PPARGC1B-203ENST00000394320 PNISRQ8TF01 805 aaKnown RBP17.68■□□□□ 0.42
PPARGC1B-203ENST00000394320 DEKP35659 375 aaKnown RBP17.67■□□□□ 0.42
PPARGC1B-203ENST00000394320 SF3A1Q15459 793 aaKnown RBP17.67■□□□□ 0.42
PPARGC1B-203ENST00000394320 PTPN23Q9H3S7 1636 aa17.67■□□□□ 0.42
PPARGC1B-203ENST00000394320 AKNAQ7Z591 1439 aa17.67■□□□□ 0.42
PPARGC1B-203ENST00000394320 FAM184AQ8NB25 1140 aa17.67■□□□□ 0.42
PPARGC1B-203ENST00000394320 ADGRL1O94910 1474 aa17.67■□□□□ 0.42
PPARGC1B-203ENST00000394320 PRKAR2BP31323 418 aa17.67■□□□□ 0.42
PPARGC1B-203ENST00000394320 AKAP17AQ02040 695 aaKnown RBP17.67■□□□□ 0.42
PPARGC1B-203ENST00000394320 SKOR2Q2VWA4 1001 aaPredicted RBP17.67■□□□□ 0.42
PPARGC1B-203ENST00000394320 INTS3Q68E01 1043 aaKnown RBP17.66■□□□□ 0.42
PPARGC1B-203ENST00000394320 RIC3Q7Z5B4 369 aa17.66■□□□□ 0.42
PPARGC1B-203ENST00000394320 SYTL4Q96C24 671 aaPredicted RBP17.66■□□□□ 0.42
PPARGC1B-203ENST00000394320 SLC12A5Q9H2X9 1139 aa17.66■□□□□ 0.42
PPARGC1B-203ENST00000394320 RASSF8Q8NHQ8 419 aa17.66■□□□□ 0.42
PPARGC1B-203ENST00000394320 ABCC5O15440 1437 aa17.66■□□□□ 0.42
PPARGC1B-203ENST00000394320 H3BQV1 296 aa17.65■□□□□ 0.42
PPARGC1B-203ENST00000394320 IFFO2Q5TF58 517 aa17.65■□□□□ 0.42
PPARGC1B-203ENST00000394320 NINLQ9Y2I6 1382 aa17.65■□□□□ 0.42
PPARGC1B-203ENST00000394320 UBTFL1P0CB47 393 aaPredicted RBP17.65■□□□□ 0.42
PPARGC1B-203ENST00000394320 CLSTN1O94985 981 aa17.65■□□□□ 0.42
PPARGC1B-203ENST00000394320 PDE3AQ14432 1141 aa17.64■□□□□ 0.41
PPARGC1B-203ENST00000394320 CABP1Q9NZU7 370 aa17.64■□□□□ 0.41
PPARGC1B-203ENST00000394320 NOL8Q76FK4 1167 aaKnown RBP17.64■□□□□ 0.41
PPARGC1B-203ENST00000394320 WDR63Q8IWG1 891 aa17.64■□□□□ 0.41
PPARGC1B-203ENST00000394320 AEBP2Q6ZN18 517 aaPredicted RBP17.63■□□□□ 0.41
PPARGC1B-203ENST00000394320 NECTIN2Q92692 538 aa17.63■□□□□ 0.41
PPARGC1B-203ENST00000394320 TATP17735 454 aaPredicted RBP17.63■□□□□ 0.41
PPARGC1B-203ENST00000394320 GZF1Q9H116 711 aaPredicted RBP17.63■□□□□ 0.41
PPARGC1B-203ENST00000394320 TRDNQ13061 729 aa17.62■□□□□ 0.41
PPARGC1B-203ENST00000394320 NUTM2GQ5VZR2 741 aa17.62■□□□□ 0.41
PPARGC1B-203ENST00000394320 ZNF428Q96B54 188 aa17.61■□□□□ 0.41
PPARGC1B-203ENST00000394320 VPS37DQ86XT2 251 aa17.61■□□□□ 0.41
PPARGC1B-203ENST00000394320 CCDC61Q9Y6R9 512 aa17.6■□□□□ 0.41
PPARGC1B-203ENST00000394320 THOC2Q8NI27 1593 aaKnown RBP17.6■□□□□ 0.41
PPARGC1B-203ENST00000394320 MSH5O43196 834 aa17.6■□□□□ 0.41
PPARGC1B-203ENST00000394320 MARCH6O60337 910 aa17.6■□□□□ 0.41
PPARGC1B-203ENST00000394320 NCOA1Q15788 1441 aa17.6■□□□□ 0.41
PPARGC1B-203ENST00000394320 TWISTNBQ3B726 338 aaPredicted RBP17.59■□□□□ 0.41
PPARGC1B-203ENST00000394320 TRIM29Q14134 588 aa17.58■□□□□ 0.4
PPARGC1B-203ENST00000394320 FOXD4L1Q9NU39 408 aa17.58■□□□□ 0.4
PPARGC1B-203ENST00000394320 ANO2Q9NQ90 1003 aa17.58■□□□□ 0.4
PPARGC1B-203ENST00000394320 DENND4BO75064 1496 aaPredicted RBP17.57■□□□□ 0.4
PPARGC1B-203ENST00000394320 DNAJC5BQ9UF47 199 aa17.57■□□□□ 0.4
PPARGC1B-203ENST00000394320 CLASRPQ8N2M8 674 aaKnown RBP17.57■□□□□ 0.4
PPARGC1B-203ENST00000394320 CDC45O75419 566 aa17.56■□□□□ 0.4
PPARGC1B-203ENST00000394320 FCHSD2O94868 740 aa17.56■□□□□ 0.4
PPARGC1B-203ENST00000394320 EXOSC9Q06265 439 aaKnown RBP17.56■□□□□ 0.4
PPARGC1B-203ENST00000394320 SPG7Q9UQ90 795 aa17.56■□□□□ 0.4
PPARGC1B-203ENST00000394320 ERC1Q8IUD2 1116 aa17.56■□□□□ 0.4
PPARGC1B-203ENST00000394320 PANK1Q8TE04 598 aa17.56■□□□□ 0.4
PPARGC1B-203ENST00000394320 FANCIQ9NVI1 1328 aa17.56■□□□□ 0.4
PPARGC1B-203ENST00000394320 CPLX1O14810 134 aa17.56■□□□□ 0.4
PPARGC1B-203ENST00000394320 SULT6B1Q6IMI4 303 aa17.56■□□□□ 0.4
PPARGC1B-203ENST00000394320 LNPKQ9C0E8 428 aa17.56■□□□□ 0.4
PPARGC1B-203ENST00000394320 TRIM34Q9BYJ4 488 aa17.56■□□□□ 0.4
PPARGC1B-203ENST00000394320 GCC1Q96CN9 775 aa17.55■□□□□ 0.4
PPARGC1B-203ENST00000394320 ZNF608Q9ULD9 1512 aaPredicted RBP17.55■□□□□ 0.4
PPARGC1B-203ENST00000394320 SLC26A8Q96RN1 970 aa17.55■□□□□ 0.4
PPARGC1B-203ENST00000394320 HMGB2P26583 209 aaKnown RBP17.55■□□□□ 0.4
PPARGC1B-203ENST00000394320 APPP05067 770 aa17.55■□□□□ 0.4
PPARGC1B-203ENST00000394320 KCNH5Q8NCM2 988 aa17.55■□□□□ 0.4
PPARGC1B-203ENST00000394320 CHMP5Q9NZZ3 219 aa17.55■□□□□ 0.4
PPARGC1B-203ENST00000394320 CCT4P50991 539 aaKnown RBP17.54■□□□□ 0.4
PPARGC1B-203ENST00000394320 DDX49Q9Y6V7 483 aaKnown RBP17.54■□□□□ 0.4
PPARGC1B-203ENST00000394320 AIMP1Q12904 312 aaKnown RBP17.54■□□□□ 0.4
PPARGC1B-203ENST00000394320 NUCB2P80303 420 aa17.54■□□□□ 0.4
PPARGC1B-203ENST00000394320 RBM33Q96EV2 1170 aaKnown RBP17.53■□□□□ 0.4
PPARGC1B-203ENST00000394320 HIP1O00291 1037 aa17.53■□□□□ 0.4
PPARGC1B-203ENST00000394320 FANCAO15360 1455 aa17.53■□□□□ 0.4
PPARGC1B-203ENST00000394320 KIF6Q6ZMV9 814 aa17.53■□□□□ 0.4
PPARGC1B-203ENST00000394320 NUDT16Q96DE0 195 aaKnown RBP17.53■□□□□ 0.4
PPARGC1B-203ENST00000394320 UNC13AQ9UPW8 1703 aa17.53■□□□□ 0.4
PPARGC1B-203ENST00000394320 ERICH2A1L162 156 aa17.53■□□□□ 0.4
PPARGC1B-203ENST00000394320 ZNF530Q6P9A1 599 aaPredicted RBP17.52■□□□□ 0.4
PPARGC1B-203ENST00000394320 CNTROBQ8N137 903 aa17.52■□□□□ 0.4
PPARGC1B-203ENST00000394320 HDGFL1Q5TGJ6 251 aa17.52■□□□□ 0.39
PPARGC1B-203ENST00000394320 GNAI2P04899 355 aa17.51■□□□□ 0.39
PPARGC1B-203ENST00000394320 DHX29Q7Z478 1369 aaKnown RBP17.51■□□□□ 0.39
PPARGC1B-203ENST00000394320 FAM135AQ9P2D6 1515 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms